RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 FGF8P55075 233 aaPredicted RBP8.54□□□□□ -1.04
CCDC90B-210ENST00000528149 ALKAL2Q6UX46 152 aa8.54□□□□□ -1.04
CCDC90B-210ENST00000528149 IQCF2Q8IXL9 164 aa8.54□□□□□ -1.04
CCDC90B-210ENST00000528149 RNF141Q8WVD5 230 aa8.54□□□□□ -1.04
CCDC90B-210ENST00000528149 PHYHIPLQ96FC7 376 aa8.54□□□□□ -1.04
CCDC90B-210ENST00000528149 SLC50A1Q9BRV3 221 aa8.54□□□□□ -1.04
CCDC90B-210ENST00000528149 A0A1B0GV50 99 aa8.53□□□□□ -1.04
CCDC90B-210ENST00000528149 MAP1LC3B2A6NCE7 125 aa8.53□□□□□ -1.04
CCDC90B-210ENST00000528149 UMAD1C9J7I0 102 aa8.53□□□□□ -1.04
CCDC90B-210ENST00000528149 NDUFB4O95168 129 aa8.53□□□□□ -1.04
CCDC90B-210ENST00000528149 GCHFRP30047 84 aa8.53□□□□□ -1.04
CCDC90B-210ENST00000528149 GUK1Q16774 197 aa8.53□□□□□ -1.04
CCDC90B-210ENST00000528149 SAMD13Q5VXD3 122 aa8.53□□□□□ -1.04
CCDC90B-210ENST00000528149 PQLC2Q6ZP29 291 aa8.53□□□□□ -1.04
CCDC90B-210ENST00000528149 SAT2Q96F10 170 aaPredicted RBP8.53□□□□□ -1.04
CCDC90B-210ENST00000528149 FAM110AQ9BQ89 295 aa8.53□□□□□ -1.04
CCDC90B-210ENST00000528149 MAP1LC3BQ9GZQ8 125 aa8.53□□□□□ -1.04
CCDC90B-210ENST00000528149 EDA2RQ9HAV5 297 aa8.53□□□□□ -1.04
CCDC90B-210ENST00000528149 ZNF331Q9NQX6 463 aaPredicted RBP8.53□□□□□ -1.04
CCDC90B-210ENST00000528149 F6UB75 175 aa8.52□□□□□ -1.05
CCDC90B-210ENST00000528149 NBEAP1P0C6P0 100 aa8.52□□□□□ -1.05
CCDC90B-210ENST00000528149 PDE6HQ13956 83 aa8.52□□□□□ -1.05
CCDC90B-210ENST00000528149 GDF5OSQ5U4N7 250 aa8.52□□□□□ -1.05
CCDC90B-210ENST00000528149 EIF5AL1Q6IS14 154 aaKnown RBP8.52□□□□□ -1.05
CCDC90B-210ENST00000528149 EXOC3-AS1Q8N2X6 119 aa8.52□□□□□ -1.05
CCDC90B-210ENST00000528149 ZNF738Q8NE65 137 aa8.52□□□□□ -1.05
CCDC90B-210ENST00000528149 TUBA4BQ9H853 241 aa8.52□□□□□ -1.05
CCDC90B-210ENST00000528149 KMT2AQ03164 3969 aa8.51□□□□□ -1.05
CCDC90B-210ENST00000528149 ZNF253O75346 499 aa8.51□□□□□ -1.05
CCDC90B-210ENST00000528149 CXorf1O96002 111 aa8.51□□□□□ -1.05
CCDC90B-210ENST00000528149 RPL35AP18077 110 aaKnown RBP8.51□□□□□ -1.05
CCDC90B-210ENST00000528149 SULT1A2P50226 295 aa8.51□□□□□ -1.05
CCDC90B-210ENST00000528149 PSG3Q16557 428 aa8.51□□□□□ -1.05
CCDC90B-210ENST00000528149 ACTL10Q5JWF8 245 aa8.51□□□□□ -1.05
CCDC90B-210ENST00000528149 DPPA3Q6W0C5 159 aa8.51□□□□□ -1.05
CCDC90B-210ENST00000528149 TMPRSS5Q9H3S3 457 aa8.51□□□□□ -1.05
CCDC90B-210ENST00000528149 DNAH10Q8IVF4 4471 aa8.51□□□□□ -1.05
CCDC90B-210ENST00000528149 ZNF705FA8MVS1 300 aaPredicted RBP8.5□□□□□ -1.05
CCDC90B-210ENST00000528149 M0R3E3 92 aa8.5□□□□□ -1.05
CCDC90B-210ENST00000528149 CMC4P56277 68 aaPredicted RBP8.5□□□□□ -1.05
CCDC90B-210ENST00000528149 RANP62826 216 aaKnown RBP8.5□□□□□ -1.05
CCDC90B-210ENST00000528149 ICAM4Q14773 271 aa8.5□□□□□ -1.05
CCDC90B-210ENST00000528149 SFT2D1Q8WV19 159 aa8.5□□□□□ -1.05
CCDC90B-210ENST00000528149 RPUSD4Q96CM3 377 aaKnown RBP8.5□□□□□ -1.05
CCDC90B-210ENST00000528149 Q9H3A6 140 aa8.5□□□□□ -1.05
CCDC90B-210ENST00000528149 ZMAT4Q9H898 229 aa8.5□□□□□ -1.05
CCDC90B-210ENST00000528149 ZNF705EA8MWA4 302 aaPredicted RBP8.49□□□□□ -1.05
CCDC90B-210ENST00000528149 PRAC2D3DTV9 90 aa8.49□□□□□ -1.05
CCDC90B-210ENST00000528149 IGKV3-20P01619 116 aa8.49□□□□□ -1.05
CCDC90B-210ENST00000528149 H2AFB1P0C5Y9 115 aa8.49□□□□□ -1.05
CCDC90B-210ENST00000528149 ZNF705DP0CH99 300 aaPredicted RBP8.49□□□□□ -1.05
CCDC90B-210ENST00000528149 ZNF705BP0CI00 300 aaPredicted RBP8.49□□□□□ -1.05
CCDC90B-210ENST00000528149 HLA-DRB4P13762 266 aa8.49□□□□□ -1.05
CCDC90B-210ENST00000528149 RAB5CP51148 216 aa8.49□□□□□ -1.05
CCDC90B-210ENST00000528149 UBE2G2P60604 165 aa8.49□□□□□ -1.05
CCDC90B-210ENST00000528149 PSG9Q00887 426 aa8.49□□□□□ -1.05
CCDC90B-210ENST00000528149 HAGHQ16775 308 aa8.49□□□□□ -1.05
CCDC90B-210ENST00000528149 LINC00322Q6ZN03 302 aaPredicted RBP8.49□□□□□ -1.05
CCDC90B-210ENST00000528149 FOXI2Q6ZQN5 318 aa8.49□□□□□ -1.05
CCDC90B-210ENST00000528149 STHQ8IWL8 128 aa8.49□□□□□ -1.05
CCDC90B-210ENST00000528149 SAV1Q9H4B6 383 aaPredicted RBP8.49□□□□□ -1.05
CCDC90B-210ENST00000528149 AAMDCQ9H7C9 122 aa8.49□□□□□ -1.05
CCDC90B-210ENST00000528149 TMEM167BQ9NRX6 74 aa8.49□□□□□ -1.05
CCDC90B-210ENST00000528149 HLA-DRB4X5D2U9 266 aa8.49□□□□□ -1.05
CCDC90B-210ENST00000528149 IGKV2-40A0A087WW87 121 aaPredicted RBP8.48□□□□□ -1.05
CCDC90B-210ENST00000528149 A0A0J9YX75 114 aa8.48□□□□□ -1.05
CCDC90B-210ENST00000528149 A8MZ25 164 aa8.48□□□□□ -1.05
CCDC90B-210ENST00000528149 IGKV2D-40P01614 121 aaPredicted RBP8.48□□□□□ -1.05
CCDC90B-210ENST00000528149 HIST1H1AQ02539 215 aaPredicted RBP8.48□□□□□ -1.05
CCDC90B-210ENST00000528149 TRPT1Q86TN4 253 aaKnown RBP8.48□□□□□ -1.05
CCDC90B-210ENST00000528149 SUN5Q8TC36 379 aa8.48□□□□□ -1.05
CCDC90B-210ENST00000528149 MBD3L1Q8WWY6 194 aa8.48□□□□□ -1.05
CCDC90B-210ENST00000528149 OTORQ9NRC9 128 aa8.48□□□□□ -1.05
CCDC90B-210ENST00000528149 RPH3ALQ9UNE2 315 aa8.48□□□□□ -1.05
CCDC90B-210ENST00000528149 YTHDF2Q9Y5A9 579 aaKnown RBP8.48□□□□□ -1.05
CCDC90B-210ENST00000528149 LOC102724200A0A096LPH7 203 aaPredicted RBP8.47□□□□□ -1.05
CCDC90B-210ENST00000528149 GGTLC3B5MD39 225 aa8.47□□□□□ -1.05
CCDC90B-210ENST00000528149 H3BMM0 161 aa8.47□□□□□ -1.05
CCDC90B-210ENST00000528149 GNG5P63218 68 aa8.47□□□□□ -1.05
CCDC90B-210ENST00000528149 EBLN2Q6P2I7 272 aa8.47□□□□□ -1.05
CCDC90B-210ENST00000528149 OR4B1Q8NGF8 309 aa8.47□□□□□ -1.05
CCDC90B-210ENST00000528149 OR8A1Q8NGG7 326 aa8.47□□□□□ -1.05
CCDC90B-210ENST00000528149 MRPL53Q96EL3 112 aaKnown RBP8.47□□□□□ -1.05
CCDC90B-210ENST00000528149 PRELID1Q9Y255 219 aa8.47□□□□□ -1.05
CCDC90B-210ENST00000528149 PGPA6NDG6 321 aa8.46□□□□□ -1.06
CCDC90B-210ENST00000528149 SLC25A5P05141 298 aaKnown RBP8.46□□□□□ -1.06
CCDC90B-210ENST00000528149 CNN1P51911 297 aaKnown RBP8.46□□□□□ -1.06
CCDC90B-210ENST00000528149 FXYD7P58549 80 aa8.46□□□□□ -1.06
CCDC90B-210ENST00000528149 LYPD1Q8N2G4 141 aa8.46□□□□□ -1.06
CCDC90B-210ENST00000528149 TM2D3Q9BRN9 247 aa8.46□□□□□ -1.06
CCDC90B-210ENST00000528149 CLEC5AQ9NY25 188 aa8.46□□□□□ -1.06
CCDC90B-210ENST00000528149 FAM74A7A6NL05 159 aa8.45□□□□□ -1.06
CCDC90B-210ENST00000528149 HBE1P02100 147 aa8.45□□□□□ -1.06
CCDC90B-210ENST00000528149 CCL20P78556 96 aa8.45□□□□□ -1.06
CCDC90B-210ENST00000528149 ERCC8Q13216 396 aa8.45□□□□□ -1.06
CCDC90B-210ENST00000528149 TEX261Q6UWH6 196 aa8.45□□□□□ -1.06
CCDC90B-210ENST00000528149 PCNPQ8WW12 178 aaKnown RBP8.45□□□□□ -1.06
CCDC90B-210ENST00000528149 SLC35B3Q9H1N7 401 aa8.45□□□□□ -1.06
CCDC90B-210ENST00000528149 TRAV1-1A0A0B4J248 108 aa8.44□□□□□ -1.06
CCDC90B-210ENST00000528149 A0A1W2PRE2 83 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms