RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 TRAV1-1A0A0B4J248 108 aa10.2□□□□□ -0.78
CAPN1-212ENST00000527887 A0A0J9YX75 114 aa10.2□□□□□ -0.78
CAPN1-212ENST00000527887 AMBPP02760 352 aa10.2□□□□□ -0.78
CAPN1-212ENST00000527887 ORM2P19652 201 aa10.2□□□□□ -0.78
CAPN1-212ENST00000527887 OR4B1Q8NGF8 309 aa10.2□□□□□ -0.78
CAPN1-212ENST00000527887 RSG1Q9BU20 258 aa10.2□□□□□ -0.78
CAPN1-212ENST00000527887 PLA2G2EQ9NZK7 142 aa10.2□□□□□ -0.78
CAPN1-212ENST00000527887 GOLT1BQ9Y3E0 138 aa10.2□□□□□ -0.78
CAPN1-212ENST00000527887 RAB19A4D1S5 217 aa10.19□□□□□ -0.78
CAPN1-212ENST00000527887 A8MTW9 85 aa10.19□□□□□ -0.78
CAPN1-212ENST00000527887 TEX46H3BTG2 121 aa10.19□□□□□ -0.78
CAPN1-212ENST00000527887 IGKV3-20P01619 116 aa10.19□□□□□ -0.78
CAPN1-212ENST00000527887 HBE1P02100 147 aa10.19□□□□□ -0.78
CAPN1-212ENST00000527887 CAMLGP49069 296 aa10.19□□□□□ -0.78
CAPN1-212ENST00000527887 PLP1P60201 277 aa10.19□□□□□ -0.78
CAPN1-212ENST00000527887 PXDC1Q5TGL8 231 aa10.19□□□□□ -0.78
CAPN1-212ENST00000527887 CYP2G1PQ6ZSU1 146 aa10.19□□□□□ -0.78
CAPN1-212ENST00000527887 MBD3L1Q8WWY6 194 aa10.19□□□□□ -0.78
CAPN1-212ENST00000527887 FAM210BQ96KR6 192 aa10.19□□□□□ -0.78
CAPN1-212ENST00000527887 SLC25A22Q9H936 323 aa10.19□□□□□ -0.78
CAPN1-212ENST00000527887 DOK5Q9P104 306 aa10.19□□□□□ -0.78
CAPN1-212ENST00000527887 CELA1Q9UNI1 258 aa10.19□□□□□ -0.78
CAPN1-212ENST00000527887 SMCO3A2RU48 225 aa10.18□□□□□ -0.78
CAPN1-212ENST00000527887 AGPAT2O15120 278 aa10.18□□□□□ -0.78
CAPN1-212ENST00000527887 HYPMO75409 117 aa10.18□□□□□ -0.78
CAPN1-212ENST00000527887 DUSP14O95147 198 aaKnown RBP10.18□□□□□ -0.78
CAPN1-212ENST00000527887 RPL7P18124 248 aaKnown RBP10.18□□□□□ -0.78
CAPN1-212ENST00000527887 M6PRP20645 277 aa10.18□□□□□ -0.78
CAPN1-212ENST00000527887 RAB2AP61019 212 aa10.18□□□□□ -0.78
CAPN1-212ENST00000527887 PRR20EP86478 221 aa10.18□□□□□ -0.78
CAPN1-212ENST00000527887 PRR20CP86479 221 aa10.18□□□□□ -0.78
CAPN1-212ENST00000527887 PRR20DP86480 221 aa10.18□□□□□ -0.78
CAPN1-212ENST00000527887 PRR20BP86481 221 aa10.18□□□□□ -0.78
CAPN1-212ENST00000527887 PRR20AP86496 221 aa10.18□□□□□ -0.78
CAPN1-212ENST00000527887 ACOT6Q3I5F7 207 aaPredicted RBP10.18□□□□□ -0.78
CAPN1-212ENST00000527887 FAM78BQ5VT40 261 aa10.18□□□□□ -0.78
CAPN1-212ENST00000527887 TMEM182Q6ZP80 229 aaPredicted RBP10.18□□□□□ -0.78
CAPN1-212ENST00000527887 NDUFAF3Q9BU61 184 aa10.18□□□□□ -0.78
CAPN1-212ENST00000527887 DNAH6Q9C0G6 4158 aa10.17□□□□□ -0.78
CAPN1-212ENST00000527887 P0DMU3 169 aa10.17□□□□□ -0.78
CAPN1-212ENST00000527887 FAM231AP0DMU4 169 aa10.17□□□□□ -0.78
CAPN1-212ENST00000527887 FAM231CP0DMU5 169 aa10.17□□□□□ -0.78
CAPN1-212ENST00000527887 GATA2P23769 480 aaPredicted RBP10.17□□□□□ -0.78
CAPN1-212ENST00000527887 B2MP61769 119 aa10.17□□□□□ -0.78
CAPN1-212ENST00000527887 UQCC3Q6UW78 93 aa10.17□□□□□ -0.78
CAPN1-212ENST00000527887 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.17□□□□□ -0.78
CAPN1-212ENST00000527887 Q6ZRG5 221 aa10.17□□□□□ -0.78
CAPN1-212ENST00000527887 MGST2Q99735 147 aa10.17□□□□□ -0.78
CAPN1-212ENST00000527887 SHANK2-AS3Q9BTD1 123 aa10.17□□□□□ -0.78
CAPN1-212ENST00000527887 SLC25A39Q9BZJ4 359 aaPredicted RBP10.17□□□□□ -0.78
CAPN1-212ENST00000527887 HIGD1AQ9Y241 93 aa10.17□□□□□ -0.78
CAPN1-212ENST00000527887 IGHV3OR16-12A0A075B7B8 117 aa10.16□□□□□ -0.78
CAPN1-212ENST00000527887 H3BRN7 92 aa10.16□□□□□ -0.78
CAPN1-212ENST00000527887 H2AFB1P0C5Y9 115 aa10.16□□□□□ -0.78
CAPN1-212ENST00000527887 S100A1P23297 94 aa10.16□□□□□ -0.78
CAPN1-212ENST00000527887 FXYD7P58549 80 aa10.16□□□□□ -0.78
CAPN1-212ENST00000527887 DEFB1P60022 68 aa10.16□□□□□ -0.78
CAPN1-212ENST00000527887 FAM213BQ8TBF2 198 aa10.16□□□□□ -0.78
CAPN1-212ENST00000527887 C20orf173Q96LM9 149 aa10.16□□□□□ -0.78
CAPN1-212ENST00000527887 IGF2BP2-AS1Q96M15 143 aa10.16□□□□□ -0.78
CAPN1-212ENST00000527887 C17orf77Q96MU5 243 aa10.16□□□□□ -0.78
CAPN1-212ENST00000527887 ACTR3CQ9C0K3 210 aaPredicted RBP10.16□□□□□ -0.78
CAPN1-212ENST00000527887 SLC35B3Q9H1N7 401 aa10.16□□□□□ -0.78
CAPN1-212ENST00000527887 SMDT1Q9H4I9 107 aa10.16□□□□□ -0.78
CAPN1-212ENST00000527887 SLC39A9Q9NUM3 307 aa10.16□□□□□ -0.78
CAPN1-212ENST00000527887 DKK2Q9UBU2 259 aa10.16□□□□□ -0.78
CAPN1-212ENST00000527887 HECTD4Q9Y4D8 3996 aa10.15□□□□□ -0.78
CAPN1-212ENST00000527887 F6UB75 175 aa10.15□□□□□ -0.78
CAPN1-212ENST00000527887 LINC00869P0C866 280 aa10.15□□□□□ -0.78
CAPN1-212ENST00000527887 RRN3P1Q2M238 152 aa10.15□□□□□ -0.78
CAPN1-212ENST00000527887 FFAR4Q5NUL3 377 aa10.15□□□□□ -0.78
CAPN1-212ENST00000527887 SLC7A5P1Q8MH63 180 aa10.15□□□□□ -0.78
CAPN1-212ENST00000527887 C1orf158Q8N1D5 194 aa10.15□□□□□ -0.78
CAPN1-212ENST00000527887 NIPSNAP3BQ9BS92 247 aa10.15□□□□□ -0.78
CAPN1-212ENST00000527887 PXMP4Q9Y6I8 212 aa10.15□□□□□ -0.78
CAPN1-212ENST00000527887 CTXND1A0A1B0GTU2 59 aa10.14□□□□□ -0.79
CAPN1-212ENST00000527887 NDUFS6O75380 124 aaKnown RBP10.14□□□□□ -0.79
CAPN1-212ENST00000527887 TAGLN2P37802 199 aaKnown RBP10.14□□□□□ -0.79
CAPN1-212ENST00000527887 EMP1P54849 157 aa10.14□□□□□ -0.79
CAPN1-212ENST00000527887 AMTNQ6UX39 209 aa10.14□□□□□ -0.79
CAPN1-212ENST00000527887 COMMD7Q86VX2 200 aa10.14□□□□□ -0.79
CAPN1-212ENST00000527887 POM121L12Q8N7R1 296 aa10.14□□□□□ -0.79
CAPN1-212ENST00000527887 OR10G4Q8NGN3 311 aa10.14□□□□□ -0.79
CAPN1-212ENST00000527887 OR10G9Q8NGN4 311 aa10.14□□□□□ -0.79
CAPN1-212ENST00000527887 OR10G7Q8NGN6 311 aa10.14□□□□□ -0.79
CAPN1-212ENST00000527887 SCRT1Q9BWW7 348 aa10.14□□□□□ -0.79
CAPN1-212ENST00000527887 A0A087X0K7 114 aa10.13□□□□□ -0.79
CAPN1-212ENST00000527887 TRAV8-2A0A0B4J237 113 aa10.13□□□□□ -0.79
CAPN1-212ENST00000527887 LOC102723971A0A1B0GUV8 181 aa10.13□□□□□ -0.79
CAPN1-212ENST00000527887 ATP6V1G1O75348 118 aa10.13□□□□□ -0.79
CAPN1-212ENST00000527887 OR5G3P0C626 314 aa10.13□□□□□ -0.79
CAPN1-212ENST00000527887 CNN1P51911 297 aaKnown RBP10.13□□□□□ -0.79
CAPN1-212ENST00000527887 FAM222AQ5U5X8 452 aa10.13□□□□□ -0.79
CAPN1-212ENST00000527887 LINC00336Q6ZUF6 198 aa10.13□□□□□ -0.79
CAPN1-212ENST00000527887 TMEM208Q9BTX3 173 aa10.13□□□□□ -0.79
CAPN1-212ENST00000527887 A0A1W2PPV4 95 aa10.12□□□□□ -0.79
CAPN1-212ENST00000527887 TSPOP30536 169 aa10.12□□□□□ -0.79
CAPN1-212ENST00000527887 FHITP49789 147 aa10.12□□□□□ -0.79
CAPN1-212ENST00000527887 PPT1P50897 306 aa10.12□□□□□ -0.79
CAPN1-212ENST00000527887 RHOBP62745 196 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms