RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 SIGLEC9Q9Y336 463 aa9.92□□□□□ -0.82
CAPN1-208ENST00000527323 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.91□□□□□ -0.82
CAPN1-208ENST00000527323 A1L4Q6 167 aa9.91□□□□□ -0.82
CAPN1-208ENST00000527323 NPIPB6E9PJ23 425 aa9.91□□□□□ -0.82
CAPN1-208ENST00000527323 K7EQM0 130 aa9.91□□□□□ -0.82
CAPN1-208ENST00000527323 LOXP28300 417 aaPredicted RBP9.91□□□□□ -0.82
CAPN1-208ENST00000527323 RHOGP84095 191 aa9.91□□□□□ -0.82
CAPN1-208ENST00000527323 OR10AG1Q8NH19 301 aa9.91□□□□□ -0.82
CAPN1-208ENST00000527323 ZC2HC1AQ96GY0 325 aa9.91□□□□□ -0.82
CAPN1-208ENST00000527323 FBXL15Q9H469 300 aa9.91□□□□□ -0.82
CAPN1-208ENST00000527323 TMSB15BA0A087X1C1 80 aa9.91□□□□□ -0.82
CAPN1-208ENST00000527323 C19orf84I3L1E1 186 aa9.91□□□□□ -0.82
CAPN1-208ENST00000527323 VKORC1Q9BQB6 163 aa9.91□□□□□ -0.82
CAPN1-208ENST00000527323 DYNLRB1Q9NP97 96 aa9.91□□□□□ -0.82
CAPN1-208ENST00000527323 F11RQ9Y624 299 aaKnown RBP9.91□□□□□ -0.82
CAPN1-208ENST00000527323 CNIH1O95406 144 aa9.91□□□□□ -0.82
CAPN1-208ENST00000527323 IGLV2-11P01706 119 aa9.91□□□□□ -0.82
CAPN1-208ENST00000527323 PLP1P60201 277 aa9.91□□□□□ -0.82
CAPN1-208ENST00000527323 LINC01545Q5VT33 79 aa9.91□□□□□ -0.82
CAPN1-208ENST00000527323 PPP1R27Q86WC6 154 aa9.91□□□□□ -0.82
CAPN1-208ENST00000527323 ZNF747Q9BV97 191 aa9.91□□□□□ -0.82
CAPN1-208ENST00000527323 TMEM133Q9H2Q1 129 aa9.91□□□□□ -0.82
CAPN1-208ENST00000527323 GCN1Q92616 2671 aaKnown RBP9.9□□□□□ -0.82
CAPN1-208ENST00000527323 NCR2O95944 276 aa9.9□□□□□ -0.82
CAPN1-208ENST00000527323 IGLC1P0CG04 106 aa9.9□□□□□ -0.82
CAPN1-208ENST00000527323 OCIAD2Q56VL3 154 aa9.9□□□□□ -0.82
CAPN1-208ENST00000527323 AP1S3Q96PC3 154 aa9.9□□□□□ -0.82
CAPN1-208ENST00000527323 PSG8Q9UQ74 426 aa9.9□□□□□ -0.82
CAPN1-208ENST00000527323 TRAV8-6A0A0B4J262 113 aa9.9□□□□□ -0.83
CAPN1-208ENST00000527323 COX8AP10176 69 aa9.9□□□□□ -0.83
CAPN1-208ENST00000527323 NGBQ9NPG2 151 aa9.9□□□□□ -0.83
CAPN1-208ENST00000527323 PEF1Q9UBV8 284 aaKnown RBP9.9□□□□□ -0.83
CAPN1-208ENST00000527323 NAV2Q8IVL1 2488 aa9.9□□□□□ -0.83
CAPN1-208ENST00000527323 C7orf71A4D174 169 aa9.89□□□□□ -0.83
CAPN1-208ENST00000527323 CT45A10P0DMU9 189 aa9.89□□□□□ -0.83
CAPN1-208ENST00000527323 COX7A1P24310 79 aa9.89□□□□□ -0.83
CAPN1-208ENST00000527323 IFI27P40305 119 aaPredicted RBP9.89□□□□□ -0.83
CAPN1-208ENST00000527323 TMEM155Q4W5P6 130 aa9.89□□□□□ -0.83
CAPN1-208ENST00000527323 C8orf31Q8N9H6 132 aa9.89□□□□□ -0.83
CAPN1-208ENST00000527323 SELENOKQ9Y6D0 94 aa9.89□□□□□ -0.83
CAPN1-208ENST00000527323 A0A1W2PRD5 423 aa9.89□□□□□ -0.83
CAPN1-208ENST00000527323 A0A1W2PRF3 423 aa9.89□□□□□ -0.83
CAPN1-208ENST00000527323 A0A1W2PRM7 423 aa9.89□□□□□ -0.83
CAPN1-208ENST00000527323 FXYD7P58549 80 aa9.89□□□□□ -0.83
CAPN1-208ENST00000527323 TMEM14CQ9P0S9 112 aa9.89□□□□□ -0.83
CAPN1-208ENST00000527323 SONP18583 2426 aaKnown RBP9.89□□□□□ -0.83
CAPN1-208ENST00000527323 GAGE12BA1L429 117 aa9.88□□□□□ -0.83
CAPN1-208ENST00000527323 TNFRSF6BO95407 300 aa9.88□□□□□ -0.83
CAPN1-208ENST00000527323 FAM106CPP0CH98 169 aa9.88□□□□□ -0.83
CAPN1-208ENST00000527323 FOXE3Q13461 319 aa9.88□□□□□ -0.83
CAPN1-208ENST00000527323 FAM106AQ4KMX7 169 aa9.88□□□□□ -0.83
CAPN1-208ENST00000527323 TMEM97Q5BJF2 176 aa9.88□□□□□ -0.83
CAPN1-208ENST00000527323 ITPR2Q14571 2701 aa9.88□□□□□ -0.83
CAPN1-208ENST00000527323 TRBV19A0A075B6N1 114 aa9.88□□□□□ -0.83
CAPN1-208ENST00000527323 M0R3E3 92 aa9.88□□□□□ -0.83
CAPN1-208ENST00000527323 S4R3C0 116 aa9.88□□□□□ -0.83
CAPN1-208ENST00000527323 GAGE10A6NGK3 116 aa9.88□□□□□ -0.83
CAPN1-208ENST00000527323 NDUFS7O75251 213 aa9.88□□□□□ -0.83
CAPN1-208ENST00000527323 FCGR2BP31994 310 aaPredicted RBP9.88□□□□□ -0.83
CAPN1-208ENST00000527323 DLX6P56179 175 aa9.88□□□□□ -0.83
CAPN1-208ENST00000527323 ANKRD17O75179 2603 aaKnown RBP9.87□□□□□ -0.83
CAPN1-208ENST00000527323 IGHV1-3A0A0C4DH29 117 aa9.87□□□□□ -0.83
CAPN1-208ENST00000527323 ZNF785A8K8V0 405 aa9.87□□□□□ -0.83
CAPN1-208ENST00000527323 TEX22C9J3V5 150 aa9.87□□□□□ -0.83
CAPN1-208ENST00000527323 D6R8Y8 96 aa9.87□□□□□ -0.83
CAPN1-208ENST00000527323 E7EQL1 145 aa9.87□□□□□ -0.83
CAPN1-208ENST00000527323 RPEQ96AT9 228 aa9.87□□□□□ -0.83
CAPN1-208ENST00000527323 CUBNO60494 3623 aa9.87□□□□□ -0.83
CAPN1-208ENST00000527323 A0A1W2PPR1 153 aa9.87□□□□□ -0.83
CAPN1-208ENST00000527323 IGKV1-17P01599 117 aa9.87□□□□□ -0.83
CAPN1-208ENST00000527323 IL4P05112 153 aa9.87□□□□□ -0.83
CAPN1-208ENST00000527323 LOXL1Q08397 574 aaPredicted RBP9.87□□□□□ -0.83
CAPN1-208ENST00000527323 PSG3Q16557 428 aa9.87□□□□□ -0.83
CAPN1-208ENST00000527323 PVRIGQ6DKI7 326 aa9.87□□□□□ -0.83
CAPN1-208ENST00000527323 ACANP16112 2415 aa9.87□□□□□ -0.83
CAPN1-208ENST00000527323 FLNBO75369 2602 aaKnown RBP9.87□□□□□ -0.83
CAPN1-208ENST00000527323 TMEM75Q8N9X5 138 aa9.86□□□□□ -0.83
CAPN1-208ENST00000527323 NRGNQ92686 78 aa9.86□□□□□ -0.83
CAPN1-208ENST00000527323 RNASE6Q93091 150 aaKnown RBP9.86□□□□□ -0.83
CAPN1-208ENST00000527323 PRELID3AQ96N28 172 aa9.86□□□□□ -0.83
CAPN1-208ENST00000527323 C8orf49Q96NF6 230 aa9.86□□□□□ -0.83
CAPN1-208ENST00000527323 A0A1B0GW15 77 aa9.86□□□□□ -0.83
CAPN1-208ENST00000527323 TMEM213A2RRL7 107 aa9.86□□□□□ -0.83
CAPN1-208ENST00000527323 TMEM189A5PLL7 270 aa9.86□□□□□ -0.83
CAPN1-208ENST00000527323 I3L2K1 104 aa9.86□□□□□ -0.83
CAPN1-208ENST00000527323 CRYGBP07316 175 aa9.86□□□□□ -0.83
CAPN1-208ENST00000527323 CRIP1P50238 77 aa9.86□□□□□ -0.83
CAPN1-208ENST00000527323 RPS20P60866 119 aaKnown RBP9.86□□□□□ -0.83
CAPN1-208ENST00000527323 LYZL1Q6UWQ5 148 aa9.86□□□□□ -0.83
CAPN1-208ENST00000527323 C2orf91Q6ZV80 131 aa9.86□□□□□ -0.83
CAPN1-208ENST00000527323 SMIM15Q7Z3B0 74 aa9.86□□□□□ -0.83
CAPN1-208ENST00000527323 SHANK2-AS3Q9BTD1 123 aa9.86□□□□□ -0.83
CAPN1-208ENST00000527323 K7ERU9 68 aa9.86□□□□□ -0.83
CAPN1-208ENST00000527323 AMN1Q8IY45 258 aa9.86□□□□□ -0.83
CAPN1-208ENST00000527323 NAA38Q9BRA0 125 aaKnown RBP9.86□□□□□ -0.83
CAPN1-208ENST00000527323 SIGLEC8Q9NYZ4 499 aa9.86□□□□□ -0.83
CAPN1-208ENST00000527323 TNFRSF13BO14836 293 aaPredicted RBP9.85□□□□□ -0.83
CAPN1-208ENST00000527323 CACNG7P62955 275 aa9.85□□□□□ -0.83
CAPN1-208ENST00000527323 SEC11AP67812 179 aa9.85□□□□□ -0.83
CAPN1-208ENST00000527323 SIGLEC15Q6ZMC9 328 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms