RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 FAM210BQ96KR6 192 aa13.18□□□□□ -0.3
TSPAN4-216ENST00000526055 NIPSNAP3BQ9BS92 247 aa13.18□□□□□ -0.3
TSPAN4-216ENST00000526055 TRAV5A0A0B4J249 113 aa13.17□□□□□ -0.3
TSPAN4-216ENST00000526055 SLC17A3O00476 420 aa13.17□□□□□ -0.3
TSPAN4-216ENST00000526055 HIST1H1EP10412 219 aaKnown RBP13.17□□□□□ -0.3
TSPAN4-216ENST00000526055 BAP18Q8IXM2 172 aa13.17□□□□□ -0.3
TSPAN4-216ENST00000526055 THAP6Q8TBB0 222 aa13.17□□□□□ -0.3
TSPAN4-216ENST00000526055 C20orf144Q9BQM9 153 aa13.17□□□□□ -0.3
TSPAN4-216ENST00000526055 WDR61Q9GZS3 305 aaKnown RBP13.17□□□□□ -0.3
TSPAN4-216ENST00000526055 YTHDF2Q9Y5A9 579 aaKnown RBP13.17□□□□□ -0.3
TSPAN4-216ENST00000526055 C17orf112F2Z3M2 114 aa13.16□□□□□ -0.3
TSPAN4-216ENST00000526055 GIPP09681 153 aaPredicted RBP13.16□□□□□ -0.3
TSPAN4-216ENST00000526055 CLINT1Q14677 625 aa13.16□□□□□ -0.3
TSPAN4-216ENST00000526055 ZNF767PQ75MW2 155 aa13.16□□□□□ -0.3
TSPAN4-216ENST00000526055 ODF3Q96PU9 254 aa13.16□□□□□ -0.3
TSPAN4-216ENST00000526055 ZNF586Q9NXT0 402 aa13.16□□□□□ -0.3
TSPAN4-216ENST00000526055 PRELID1Q9Y255 219 aa13.16□□□□□ -0.3
TSPAN4-216ENST00000526055 KMT2AQ03164 3969 aa13.15□□□□□ -0.3
TSPAN4-216ENST00000526055 TRBV19A0A075B6N1 114 aa13.15□□□□□ -0.3
TSPAN4-216ENST00000526055 LYRM9A8MSI8 78 aa13.15□□□□□ -0.3
TSPAN4-216ENST00000526055 SNRPCP09234 159 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-216ENST00000526055 TAS2R60P59551 318 aa13.15□□□□□ -0.3
TSPAN4-216ENST00000526055 ATP5SQ99766 215 aa13.15□□□□□ -0.3
TSPAN4-216ENST00000526055 NDUFAF3Q9BU61 184 aa13.15□□□□□ -0.3
TSPAN4-216ENST00000526055 MRPL32Q9BYC8 188 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-216ENST00000526055 HSPB11Q9Y547 144 aa13.15□□□□□ -0.3
TSPAN4-216ENST00000526055 TRAV12-2A0A075B6T6 113 aa13.14□□□□□ -0.31
TSPAN4-216ENST00000526055 H3BTX0 84 aa13.14□□□□□ -0.31
TSPAN4-216ENST00000526055 RPP25LQ8N5L8 163 aaKnown RBP13.14□□□□□ -0.31
TSPAN4-216ENST00000526055 MBD2Q9UBB5 411 aa13.14□□□□□ -0.31
TSPAN4-216ENST00000526055 BIRC6Q9NR09 4857 aa13.13□□□□□ -0.31
TSPAN4-216ENST00000526055 ZNF705GA8MUZ8 300 aaPredicted RBP13.13□□□□□ -0.31
TSPAN4-216ENST00000526055 GCSAMLQ5JQS6 135 aa13.13□□□□□ -0.31
TSPAN4-216ENST00000526055 LINC01587Q99440 93 aa13.13□□□□□ -0.31
TSPAN4-216ENST00000526055 TIMM9Q9Y5J7 89 aa13.13□□□□□ -0.31
TSPAN4-216ENST00000526055 PRAC2D3DTV9 90 aa13.12□□□□□ -0.31
TSPAN4-216ENST00000526055 NPIPB6E9PJ23 425 aa13.12□□□□□ -0.31
TSPAN4-216ENST00000526055 H7BYZ3 331 aa13.12□□□□□ -0.31
TSPAN4-216ENST00000526055 RPL12P30050 165 aaKnown RBP13.12□□□□□ -0.31
TSPAN4-216ENST00000526055 DAD1P61803 113 aa13.12□□□□□ -0.31
TSPAN4-216ENST00000526055 ZNF493Q6ZR52 646 aa13.12□□□□□ -0.31
TSPAN4-216ENST00000526055 SLC25A2Q9BXI2 301 aa13.12□□□□□ -0.31
TSPAN4-216ENST00000526055 PARD6GQ9BYG4 376 aaPredicted RBP13.12□□□□□ -0.31
TSPAN4-216ENST00000526055 FRAS1Q86XX4 4008 aa13.11□□□□□ -0.31
TSPAN4-216ENST00000526055 NDUFB4O95168 129 aa13.11□□□□□ -0.31
TSPAN4-216ENST00000526055 IFNA5P01569 189 aa13.11□□□□□ -0.31
TSPAN4-216ENST00000526055 P0DMU3 169 aa13.11□□□□□ -0.31
TSPAN4-216ENST00000526055 FAM231AP0DMU4 169 aa13.11□□□□□ -0.31
TSPAN4-216ENST00000526055 FAM231CP0DMU5 169 aa13.11□□□□□ -0.31
TSPAN4-216ENST00000526055 LEPP41159 167 aa13.11□□□□□ -0.31
TSPAN4-216ENST00000526055 C16orf74Q96GX8 76 aa13.11□□□□□ -0.31
TSPAN4-216ENST00000526055 FAM167A-AS1Q96KT0 104 aa13.11□□□□□ -0.31
TSPAN4-216ENST00000526055 AAMDCQ9H7C9 122 aa13.11□□□□□ -0.31
TSPAN4-216ENST00000526055 PYYP10082 97 aa13.1□□□□□ -0.31
TSPAN4-216ENST00000526055 SCGB1C1Q8TD33 95 aa13.1□□□□□ -0.31
TSPAN4-216ENST00000526055 OR51M1Q9H341 326 aa13.1□□□□□ -0.31
TSPAN4-216ENST00000526055 FUT9Q9Y231 359 aa13.1□□□□□ -0.31
TSPAN4-216ENST00000526055 PLAC8L1A1L4L8 177 aa13.09□□□□□ -0.31
TSPAN4-216ENST00000526055 NBEAP1P0C6P0 100 aa13.09□□□□□ -0.31
TSPAN4-216ENST00000526055 MIR17HGQ75NE6 70 aa13.09□□□□□ -0.31
TSPAN4-216ENST00000526055 OR2T35Q8NGX2 323 aa13.09□□□□□ -0.31
TSPAN4-216ENST00000526055 TMEM263Q8WUH6 116 aaKnown RBP13.09□□□□□ -0.31
TSPAN4-216ENST00000526055 LINC00477Q96M19 166 aa13.09□□□□□ -0.31
TSPAN4-216ENST00000526055 CT45A10P0DMU9 189 aa13.08□□□□□ -0.32
TSPAN4-216ENST00000526055 AZU1P20160 251 aa13.08□□□□□ -0.32
TSPAN4-216ENST00000526055 GFI1BQ5VTD9 330 aa13.08□□□□□ -0.32
TSPAN4-216ENST00000526055 BLNKQ8WV28 456 aa13.08□□□□□ -0.32
TSPAN4-216ENST00000526055 PAXXQ9BUH6 204 aa13.08□□□□□ -0.32
TSPAN4-216ENST00000526055 TIMM8BQ9Y5J9 83 aaPredicted RBP13.08□□□□□ -0.32
TSPAN4-216ENST00000526055 M0R3E3 92 aa13.07□□□□□ -0.32
TSPAN4-216ENST00000526055 PRM2P04554 102 aa13.07□□□□□ -0.32
TSPAN4-216ENST00000526055 SLC25A5P05141 298 aaKnown RBP13.07□□□□□ -0.32
TSPAN4-216ENST00000526055 PRB4P10163 310 aaPredicted RBP13.07□□□□□ -0.32
TSPAN4-216ENST00000526055 FFAR4Q5NUL3 377 aa13.07□□□□□ -0.32
TSPAN4-216ENST00000526055 CCDC28AQ8IWP9 274 aa13.07□□□□□ -0.32
TSPAN4-216ENST00000526055 LYPD1Q8N2G4 141 aa13.07□□□□□ -0.32
TSPAN4-216ENST00000526055 RNASE8Q8TDE3 154 aaKnown RBP13.07□□□□□ -0.32
TSPAN4-216ENST00000526055 PLA2G2EQ9NZK7 142 aa13.07□□□□□ -0.32
TSPAN4-216ENST00000526055 NMBP08949 121 aa13.06□□□□□ -0.32
TSPAN4-216ENST00000526055 TAS2R45P59539 299 aa13.06□□□□□ -0.32
TSPAN4-216ENST00000526055 Q6ZNX1 250 aa13.06□□□□□ -0.32
TSPAN4-216ENST00000526055 C9orf47Q6ZRZ4 202 aa13.06□□□□□ -0.32
TSPAN4-216ENST00000526055 POM121L12Q8N7R1 296 aa13.06□□□□□ -0.32
TSPAN4-216ENST00000526055 INO80EQ8NBZ0 244 aaPredicted RBP13.06□□□□□ -0.32
TSPAN4-216ENST00000526055 RNF141Q8WVD5 230 aa13.06□□□□□ -0.32
TSPAN4-216ENST00000526055 FXYD5Q96DB9 178 aa13.06□□□□□ -0.32
TSPAN4-216ENST00000526055 PYGO2Q9BRQ0 406 aa13.06□□□□□ -0.32
TSPAN4-216ENST00000526055 OR7C2O60412 319 aa13.05□□□□□ -0.32
TSPAN4-216ENST00000526055 HTN1P15515 57 aa13.05□□□□□ -0.32
TSPAN4-216ENST00000526055 HTN3P15516 51 aa13.05□□□□□ -0.32
TSPAN4-216ENST00000526055 ICAM4Q14773 271 aa13.05□□□□□ -0.32
TSPAN4-216ENST00000526055 KIR3DS1Q14943 382 aa13.05□□□□□ -0.32
TSPAN4-216ENST00000526055 KHDC3LQ587J8 217 aa13.05□□□□□ -0.32
TSPAN4-216ENST00000526055 EXOC3-AS1Q8N2X6 119 aa13.05□□□□□ -0.32
TSPAN4-216ENST00000526055 C15orf53Q8NAA6 179 aa13.05□□□□□ -0.32
TSPAN4-216ENST00000526055 FAM19A4Q96LR4 140 aa13.05□□□□□ -0.32
TSPAN4-216ENST00000526055 AQP10Q96PS8 301 aa13.05□□□□□ -0.32
TSPAN4-216ENST00000526055 SMIM3Q9BZL3 60 aa13.05□□□□□ -0.32
TSPAN4-216ENST00000526055 CBY3A6NI87 242 aa13.04□□□□□ -0.32
TSPAN4-216ENST00000526055 KLLNB2CW77 178 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms