RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 SNRPEP62304 92 aaKnown RBP8.06□□□□□ -1.12
TRAPPC4-204ENST00000524797 VAMP2P63027 116 aa8.06□□□□□ -1.12
TRAPPC4-204ENST00000524797 C2orf50Q96LR7 162 aa8.06□□□□□ -1.12
TRAPPC4-204ENST00000524797 C11orf1Q9H5F2 150 aa8.06□□□□□ -1.12
TRAPPC4-204ENST00000524797 TREM1Q9NP99 234 aa8.06□□□□□ -1.12
TRAPPC4-204ENST00000524797 RPRMQ9NS64 109 aa8.06□□□□□ -1.12
TRAPPC4-204ENST00000524797 TRAV8-2A0A0B4J237 113 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 A0A0J9YX75 114 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 HSBP1L1C9JCN9 74 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 SLC38A11Q08AI6 406 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 EBLN2Q6P2I7 272 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 TEPPQ6URK8 271 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 PATE2Q6UY27 113 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 INO80EQ8NBZ0 244 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 OR4B1Q8NGF8 309 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 RNF141Q8WVD5 230 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 GGACTQ9BVM4 153 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 C5orf52A6NGY3 159 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 A8MTW9 85 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 OR5G3P0C626 314 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 TPT1P13693 172 aaKnown RBP8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 HLA-DMBP28068 263 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 PSG9Q00887 426 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 ZNF705AQ6ZN79 300 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 C15orf54Q8N8G6 183 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 ZNF709Q8N972 641 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 STOML3Q8TAV4 291 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 SLC35B3Q9H1N7 401 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 SMCO4Q9NRQ5 59 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 CELA1Q9UNI1 258 aa8.05□□□□□ -1.12
TRAPPC4-204ENST00000524797 A0A1B0GV90 55 aa8.04□□□□□ -1.12
TRAPPC4-204ENST00000524797 RPL7P18124 248 aaKnown RBP8.04□□□□□ -1.12
TRAPPC4-204ENST00000524797 FAM78BQ5VT40 261 aa8.04□□□□□ -1.12
TRAPPC4-204ENST00000524797 IGFL4Q6B9Z1 124 aa8.04□□□□□ -1.12
TRAPPC4-204ENST00000524797 UHRF2Q96PU4 802 aa8.04□□□□□ -1.12
TRAPPC4-204ENST00000524797 UQCC1Q9NVA1 299 aa8.04□□□□□ -1.12
TRAPPC4-204ENST00000524797 A0A087X0K7 114 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 RNF222A6NCQ9 220 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 FAM24AA6NFZ4 105 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 COLCA2A8K830 154 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 ZNF705FA8MVS1 300 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 C11orf94C9JXX5 98 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 AGPAT2O15120 278 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 MBP02144 154 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 ZNF705DP0CH99 300 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 ZNF705BP0CI00 300 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 IL15RAQ13261 267 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 MGST2Q99735 147 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 TRAV10A0A0B4J240 114 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 SMIM9A6NGZ8 99 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 CAV2P51636 162 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 S100A10P60903 97 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 C12orf74Q32Q52 190 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 LGALS9CQ6DKI2 356 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 AMTNQ6UX39 209 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 Q6ZTC4 211 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 S100A7AQ86SG5 101 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 RNF182Q8N6D2 247 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 ARV1Q9H2C2 271 aa8.03□□□□□ -1.12
TRAPPC4-204ENST00000524797 IGSF23A1L1A6 192 aa8.02□□□□□ -1.13
TRAPPC4-204ENST00000524797 MRPS12O15235 138 aaKnown RBP8.02□□□□□ -1.13
TRAPPC4-204ENST00000524797 CST7O76096 145 aa8.02□□□□□ -1.13
TRAPPC4-204ENST00000524797 DUSP14O95147 198 aaKnown RBP8.02□□□□□ -1.13
TRAPPC4-204ENST00000524797 TCTAP57738 103 aa8.02□□□□□ -1.13
TRAPPC4-204ENST00000524797 RAB32Q13637 225 aa8.02□□□□□ -1.13
TRAPPC4-204ENST00000524797 LRRC37A5PQ49AS3 106 aa8.02□□□□□ -1.13
TRAPPC4-204ENST00000524797 PPP1R1CQ8WVI7 109 aa8.02□□□□□ -1.13
TRAPPC4-204ENST00000524797 APLNQ9ULZ1 77 aa8.02□□□□□ -1.13
TRAPPC4-204ENST00000524797 GOLT1BQ9Y3E0 138 aa8.02□□□□□ -1.13
TRAPPC4-204ENST00000524797 RFNGQ9Y644 331 aa8.02□□□□□ -1.13
TRAPPC4-204ENST00000524797 IGHV3OR16-12A0A075B7B8 117 aa8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 IGLL5B9A064 214 aa8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 BAP18Q8IXM2 172 aa8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 C1orf158Q8N1D5 194 aa8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 ZNF738Q8NE65 137 aa8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 C2orf88Q9BSF0 95 aa8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 LYRM2Q9NU23 88 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 RNF24Q9Y225 148 aa8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 WDR83OSQ9Y284 106 aa8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 DNAH6Q9C0G6 4158 aa8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 TMEM189A5PLL7 270 aa8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 TCAPO15273 167 aa8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 COX7A2P2O60397 106 aa8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 MT-ND4LP03901 98 aa8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 CAMLGP49069 296 aa8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 SULT1A1P50225 295 aa8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 CNN1P51911 297 aaKnown RBP8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 SRSF3P84103 164 aaKnown RBP8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 FABP9Q0Z7S8 132 aa8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 VWC2Q2TAL6 325 aa8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 LINC00305Q7Z4B0 112 aa8.01□□□□□ -1.13
TRAPPC4-204ENST00000524797 AMBPP02760 352 aa8□□□□□ -1.13
TRAPPC4-204ENST00000524797 PPT1P50897 306 aa8□□□□□ -1.13
TRAPPC4-204ENST00000524797 RAB31Q13636 194 aa8□□□□□ -1.13
TRAPPC4-204ENST00000524797 PSG3Q16557 428 aa8□□□□□ -1.13
TRAPPC4-204ENST00000524797 TMEM252Q8N6L7 170 aa8□□□□□ -1.13
TRAPPC4-204ENST00000524797 TMEM37Q8WXS4 190 aa8□□□□□ -1.13
TRAPPC4-204ENST00000524797 SAT2Q96F10 170 aaPredicted RBP8□□□□□ -1.13
TRAPPC4-204ENST00000524797 IGF2BP2-AS1Q96M15 143 aa8□□□□□ -1.13
TRAPPC4-204ENST00000524797 PFDN5Q99471 154 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms