RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, human

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-213	ENST00000524516	BTN1A1	Q13410	526 aa		4.93	□□□□□ -1.62
PUM1-213	ENST00000524516	MAJIN	Q3KP22	176 aa		4.93	□□□□□ -1.62
PUM1-213	ENST00000524516	HOGA1	Q86XE5	327 aa		4.93	□□□□□ -1.62
PUM1-213	ENST00000524516	OR5AP2	Q8NGF4	316 aa		4.93	□□□□□ -1.62
PUM1-213	ENST00000524516	OR52I2	Q8NH67	350 aa		4.93	□□□□□ -1.62
PUM1-213	ENST00000524516	ODF3	Q96PU9	254 aa		4.93	□□□□□ -1.62
PUM1-213	ENST00000524516	FXYD6	Q9H0Q3	95 aa		4.93	□□□□□ -1.62
PUM1-213	ENST00000524516	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.92	□□□□□ -1.62
PUM1-213	ENST00000524516	LOC100130705	A0A1B0GUX0	176 aa		4.92	□□□□□ -1.62
PUM1-213	ENST00000524516	GYG2	O15488	501 aa		4.92	□□□□□ -1.62
PUM1-213	ENST00000524516	IGKV1-5	P01602	117 aa		4.92	□□□□□ -1.62
PUM1-213	ENST00000524516	GATA1	P15976	413 aa	Predicted RBP	4.92	□□□□□ -1.62
PUM1-213	ENST00000524516	HLA-DMA	P28067	261 aa		4.92	□□□□□ -1.62
PUM1-213	ENST00000524516	RNASE4	P34096	147 aa	Known RBP	4.92	□□□□□ -1.62
PUM1-213	ENST00000524516	CNBP	P62633	177 aa	Known RBP	4.92	□□□□□ -1.62
PUM1-213	ENST00000524516	ATRAID	Q6UW56	229 aa		4.92	□□□□□ -1.62
PUM1-213	ENST00000524516	TMEM75	Q8N9X5	138 aa		4.92	□□□□□ -1.62
PUM1-213	ENST00000524516	OR4D10	Q8NGI6	311 aa		4.92	□□□□□ -1.62
PUM1-213	ENST00000524516	MUC21	A0A0G2JKD1	596 aa		4.91	□□□□□ -1.62
PUM1-213	ENST00000524516	PGP	A6NDG6	321 aa		4.91	□□□□□ -1.62
PUM1-213	ENST00000524516	PRAC2	D3DTV9	90 aa		4.91	□□□□□ -1.62
PUM1-213	ENST00000524516	SCGN	O76038	276 aa		4.91	□□□□□ -1.62
PUM1-213	ENST00000524516	CFD	P00746	253 aa	Predicted RBP	4.91	□□□□□ -1.62
PUM1-213	ENST00000524516	CRP	P02741	224 aa		4.91	□□□□□ -1.62
PUM1-213	ENST00000524516	SMIM18	P0DKX4	95 aa		4.91	□□□□□ -1.62
PUM1-213	ENST00000524516	RAB31	Q13636	194 aa		4.91	□□□□□ -1.62
PUM1-213	ENST00000524516	ELOB	Q15370	118 aa		4.91	□□□□□ -1.62
PUM1-213	ENST00000524516	RHOH	Q15669	191 aa		4.91	□□□□□ -1.62
PUM1-213	ENST00000524516	GGNBP1	Q5YKI7	109 aa		4.91	□□□□□ -1.62
PUM1-213	ENST00000524516	KCNIP4	Q6PIL6	250 aa		4.91	□□□□□ -1.62
PUM1-213	ENST00000524516	NIT1	Q86X76	327 aa		4.91	□□□□□ -1.62
PUM1-213	ENST00000524516	STPG4	Q8N801	248 aa		4.91	□□□□□ -1.62
PUM1-213	ENST00000524516	SLC25A29	Q8N8R3	303 aa		4.91	□□□□□ -1.62
PUM1-213	ENST00000524516	OR10G9	Q8NGN4	311 aa		4.91	□□□□□ -1.62
PUM1-213	ENST00000524516	TMEM170A	Q8WVE7	144 aa		4.91	□□□□□ -1.62
PUM1-213	ENST00000524516	TRIM63	Q969Q1	353 aa		4.91	□□□□□ -1.62
PUM1-213	ENST00000524516		A0A087WX48	190 aa		4.9	□□□□□ -1.63
PUM1-213	ENST00000524516		A0A087X0K7	114 aa		4.9	□□□□□ -1.63
PUM1-213	ENST00000524516	IGKV2-24	A0A0C4DH68	120 aa		4.9	□□□□□ -1.63
PUM1-213	ENST00000524516	IFITM5	A6NNB3	132 aa		4.9	□□□□□ -1.63
PUM1-213	ENST00000524516	TSPAN13	O95857	204 aa		4.9	□□□□□ -1.63
PUM1-213	ENST00000524516	UBE2D1	P51668	147 aa		4.9	□□□□□ -1.63
PUM1-213	ENST00000524516	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.9	□□□□□ -1.63
PUM1-213	ENST00000524516	LINC00477	Q96M19	166 aa		4.9	□□□□□ -1.63
PUM1-213	ENST00000524516	TRGV9	Q99603	122 aa		4.9	□□□□□ -1.63
PUM1-213	ENST00000524516	AUNIP	Q9H7T9	357 aa		4.9	□□□□□ -1.63
PUM1-213	ENST00000524516	IFT46	Q9NQC8	304 aa		4.9	□□□□□ -1.63
PUM1-213	ENST00000524516	TRAV1-1	A0A0B4J248	108 aa		4.89	□□□□□ -1.63
PUM1-213	ENST00000524516	MEIS3P1	A6NDR6	274 aa		4.89	□□□□□ -1.63
PUM1-213	ENST00000524516		H3BRN7	92 aa		4.89	□□□□□ -1.63
PUM1-213	ENST00000524516	PDCD5	O14737	125 aa		4.89	□□□□□ -1.63
PUM1-213	ENST00000524516	TCRB	P04435	133 aa		4.89	□□□□□ -1.63
PUM1-213	ENST00000524516	GPX1	P07203	203 aa		4.89	□□□□□ -1.63
PUM1-213	ENST00000524516	RAP2B	P61225	183 aa		4.89	□□□□□ -1.63
PUM1-213	ENST00000524516	OPCML	Q14982	345 aa		4.89	□□□□□ -1.63
PUM1-213	ENST00000524516	DNAL1	Q4LDG9	190 aa		4.89	□□□□□ -1.63
PUM1-213	ENST00000524516	NMS	Q5H8A3	153 aa		4.89	□□□□□ -1.63
PUM1-213	ENST00000524516	LCN15	Q6UWW0	184 aa		4.89	□□□□□ -1.63
PUM1-213	ENST00000524516	TMEM91	Q6ZNR0	172 aa		4.89	□□□□□ -1.63
PUM1-213	ENST00000524516	LGI3	Q8N145	548 aa		4.89	□□□□□ -1.63
PUM1-213	ENST00000524516	NANOGP1	Q8N7R0	232 aa		4.89	□□□□□ -1.63
PUM1-213	ENST00000524516	RASL10A	Q92737	203 aa		4.89	□□□□□ -1.63
PUM1-213	ENST00000524516	UFD1	Q92890	307 aa		4.89	□□□□□ -1.63
PUM1-213	ENST00000524516	SLC50A1	Q9BRV3	221 aa		4.89	□□□□□ -1.63
PUM1-213	ENST00000524516	ZNF331	Q9NQX6	463 aa	Predicted RBP	4.89	□□□□□ -1.63
PUM1-213	ENST00000524516	C8orf4	Q9NR00	106 aa		4.89	□□□□□ -1.63
PUM1-213	ENST00000524516	AP5S1	Q9NUS5	200 aa		4.89	□□□□□ -1.63
PUM1-213	ENST00000524516	IGLV1-50	A0A075B6I6	118 aa		4.88	□□□□□ -1.63
PUM1-213	ENST00000524516	hDV102S1	A0JD36	115 aa		4.88	□□□□□ -1.63
PUM1-213	ENST00000524516	FBLL1	A6NHQ2	334 aa	Known RBP	4.88	□□□□□ -1.63
PUM1-213	ENST00000524516	KLLN	B2CW77	178 aa		4.88	□□□□□ -1.63
PUM1-213	ENST00000524516	RGS10	O43665	173 aa		4.88	□□□□□ -1.63
PUM1-213	ENST00000524516	TNFAIP8	O95379	198 aa		4.88	□□□□□ -1.63
PUM1-213	ENST00000524516	IFNA7	P01567	189 aa		4.88	□□□□□ -1.63
PUM1-213	ENST00000524516	PMP2	P02689	132 aa		4.88	□□□□□ -1.63
PUM1-213	ENST00000524516	SNRPC	P09234	159 aa	Known RBP	4.88	□□□□□ -1.63
PUM1-213	ENST00000524516	OR4E1	P0C645	316 aa		4.88	□□□□□ -1.63
PUM1-213	ENST00000524516	CXCL2	P19875	107 aa		4.88	□□□□□ -1.63
PUM1-213	ENST00000524516	ANXA7	P20073	488 aa	Known RBP	4.88	□□□□□ -1.63
PUM1-213	ENST00000524516	GPR107	Q5VW38	600 aa		4.88	□□□□□ -1.63
PUM1-213	ENST00000524516	LPCAT3	Q6P1A2	487 aa		4.88	□□□□□ -1.63
PUM1-213	ENST00000524516	DHRS11	Q6UWP2	260 aa		4.88	□□□□□ -1.63
PUM1-213	ENST00000524516	AHSA2	Q719I0	299 aa		4.88	□□□□□ -1.63
PUM1-213	ENST00000524516	CLRN3	Q8NCR9	226 aa		4.88	□□□□□ -1.63
PUM1-213	ENST00000524516	SPX	Q9BT56	116 aa		4.88	□□□□□ -1.63
PUM1-213	ENST00000524516	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	4.88	□□□□□ -1.63
PUM1-213	ENST00000524516		A0A087WWC5	75 aa		4.87	□□□□□ -1.63
PUM1-213	ENST00000524516		A0A0G2JRQ6	117 aa		4.87	□□□□□ -1.63
PUM1-213	ENST00000524516	C5orf51	A6NDU8	294 aa		4.87	□□□□□ -1.63
PUM1-213	ENST00000524516	PMS2P5	A8MQ11	134 aa		4.87	□□□□□ -1.63
PUM1-213	ENST00000524516	TSPAN5	P62079	268 aa		4.87	□□□□□ -1.63
PUM1-213	ENST00000524516	GUK1	Q16774	197 aa		4.87	□□□□□ -1.63
PUM1-213	ENST00000524516	C1orf146	Q5VVC0	180 aa		4.87	□□□□□ -1.63
PUM1-213	ENST00000524516	DHRSX	Q8N5I4	330 aa		4.87	□□□□□ -1.63
PUM1-213	ENST00000524516	NRG4	Q8WWG1	115 aa		4.87	□□□□□ -1.63
PUM1-213	ENST00000524516	SHANK2-AS3	Q9BTD1	123 aa		4.87	□□□□□ -1.63
PUM1-213	ENST00000524516	MND1	Q9BWT6	205 aa		4.87	□□□□□ -1.63
PUM1-213	ENST00000524516	HIGD1A	Q9Y241	93 aa		4.87	□□□□□ -1.63
PUM1-213	ENST00000524516	MUC17	Q685J3	4493 aa		4.86	□□□□□ -1.63
PUM1-213	ENST00000524516	TRAV18	A0A075B6X5	111 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms