RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 TSKUQ8WUA8 353 aa7.65□□□□□ -1.18
VPS13B-212ENST00000524330 BORCS7Q96B45 105 aa7.65□□□□□ -1.18
VPS13B-212ENST00000524330 NUDT11Q96G61 164 aa7.65□□□□□ -1.18
VPS13B-212ENST00000524330 DUX5Q96PT3 197 aa7.65□□□□□ -1.18
VPS13B-212ENST00000524330 MLST8Q9BVC4 326 aa7.65□□□□□ -1.18
VPS13B-212ENST00000524330 RHPN1-AS1Q9BWJ2 59 aa7.65□□□□□ -1.18
VPS13B-212ENST00000524330 GFRA4Q9GZZ7 299 aa7.65□□□□□ -1.18
VPS13B-212ENST00000524330 RNASE7Q9H1E1 156 aaKnown RBP7.65□□□□□ -1.18
VPS13B-212ENST00000524330 NRN1Q9NPD7 142 aa7.65□□□□□ -1.18
VPS13B-212ENST00000524330 CSPG4Q6UVK1 2322 aa7.64□□□□□ -1.19
VPS13B-212ENST00000524330 IGHV3OR16-13A0A075B7E8 117 aa7.64□□□□□ -1.19
VPS13B-212ENST00000524330 IGHV3-49A0A0A0MS15 119 aa7.64□□□□□ -1.19
VPS13B-212ENST00000524330 IGHV3-74A0A0B4J1X5 117 aa7.64□□□□□ -1.19
VPS13B-212ENST00000524330 SMIM27A0A1W2PRY6 76 aa7.64□□□□□ -1.19
VPS13B-212ENST00000524330 A8MWP6 167 aa7.64□□□□□ -1.19
VPS13B-212ENST00000524330 LINC01619G3V211 115 aa7.64□□□□□ -1.19
VPS13B-212ENST00000524330 M0R3E3 92 aa7.64□□□□□ -1.19
VPS13B-212ENST00000524330 HILS1P60008 231 aa7.64□□□□□ -1.19
VPS13B-212ENST00000524330 SMUG1Q53HV7 270 aa7.64□□□□□ -1.19
VPS13B-212ENST00000524330 Q6AWC8 147 aa7.64□□□□□ -1.19
VPS13B-212ENST00000524330 UNQ9165/PRO28630Q6UXU0 137 aa7.64□□□□□ -1.19
VPS13B-212ENST00000524330 LCNL1Q6ZST4 164 aa7.64□□□□□ -1.19
VPS13B-212ENST00000524330 Q6ZSV7 163 aa7.64□□□□□ -1.19
VPS13B-212ENST00000524330 OR10J6PQ8NGY7 276 aa7.64□□□□□ -1.19
VPS13B-212ENST00000524330 C4orf3Q8WVX3 66 aa7.64□□□□□ -1.19
VPS13B-212ENST00000524330 C16orf95Q9H693 158 aa7.64□□□□□ -1.19
VPS13B-212ENST00000524330 TRAPPC1Q9Y5R8 145 aa7.64□□□□□ -1.19
VPS13B-212ENST00000524330 APOHP02749 345 aaPredicted RBP7.63□□□□□ -1.19
VPS13B-212ENST00000524330 TRGC2P03986 189 aa7.63□□□□□ -1.19
VPS13B-212ENST00000524330 FAM162BQ5T6X4 162 aa7.63□□□□□ -1.19
VPS13B-212ENST00000524330 TCF24Q7RTU0 167 aa7.63□□□□□ -1.19
VPS13B-212ENST00000524330 ATP5L2Q7Z4Y8 100 aa7.63□□□□□ -1.19
VPS13B-212ENST00000524330 ZNF738Q8NE65 137 aa7.63□□□□□ -1.19
VPS13B-212ENST00000524330 FRZBQ92765 325 aa7.63□□□□□ -1.19
VPS13B-212ENST00000524330 SGK494Q96LW2 274 aa7.63□□□□□ -1.19
VPS13B-212ENST00000524330 LINC00477Q96M19 166 aa7.63□□□□□ -1.19
VPS13B-212ENST00000524330 ASCL2Q99929 193 aa7.63□□□□□ -1.19
VPS13B-212ENST00000524330 LENEPQ9Y5L5 61 aa7.63□□□□□ -1.19
VPS13B-212ENST00000524330 UTP20O75691 2785 aaKnown RBP7.63□□□□□ -1.19
VPS13B-212ENST00000524330 TRAV8-1A0A0A6YYK1 113 aa7.62□□□□□ -1.19
VPS13B-212ENST00000524330 C19orf71A6NCJ1 209 aa7.62□□□□□ -1.19
VPS13B-212ENST00000524330 NDUFA7O95182 113 aa7.62□□□□□ -1.19
VPS13B-212ENST00000524330 IGLV2-11P01706 119 aa7.62□□□□□ -1.19
VPS13B-212ENST00000524330 HLA-DQA1P01909 254 aa7.62□□□□□ -1.19
VPS13B-212ENST00000524330 ZNF138P52744 262 aa7.62□□□□□ -1.19
VPS13B-212ENST00000524330 SNRPD3P62318 126 aaKnown RBP7.62□□□□□ -1.19
VPS13B-212ENST00000524330 SRSF2Q01130 221 aaKnown RBP7.62□□□□□ -1.19
VPS13B-212ENST00000524330 TM4SF20Q53R12 229 aa7.62□□□□□ -1.19
VPS13B-212ENST00000524330 COX8CQ7Z4L0 72 aa7.62□□□□□ -1.19
VPS13B-212ENST00000524330 ZFP82Q8N141 532 aa7.62□□□□□ -1.19
VPS13B-212ENST00000524330 OR2D3Q8NGH3 330 aa7.62□□□□□ -1.19
VPS13B-212ENST00000524330 OR1N2Q8NGR9 330 aa7.62□□□□□ -1.19
VPS13B-212ENST00000524330 PRR25Q96S07 402 aa7.62□□□□□ -1.19
VPS13B-212ENST00000524330 GNB1LQ9BYB4 327 aa7.62□□□□□ -1.19
VPS13B-212ENST00000524330 ABCA12Q86UK0 2595 aa7.62□□□□□ -1.19
VPS13B-212ENST00000524330 IGHV4OR15-8A0A075B7B6 117 aa7.61□□□□□ -1.19
VPS13B-212ENST00000524330 A0A087WW49 117 aa7.61□□□□□ -1.19
VPS13B-212ENST00000524330 IGKV2-40A0A087WW87 121 aaPredicted RBP7.61□□□□□ -1.19
VPS13B-212ENST00000524330 LOC105371267A0A1B0GV96 52 aa7.61□□□□□ -1.19
VPS13B-212ENST00000524330 A0A1B0GW15 77 aa7.61□□□□□ -1.19
VPS13B-212ENST00000524330 TMEM189A5PLL7 270 aa7.61□□□□□ -1.19
VPS13B-212ENST00000524330 FABP5P3A8MUU1 101 aa7.61□□□□□ -1.19
VPS13B-212ENST00000524330 LY6G6DO95868 133 aa7.61□□□□□ -1.19
VPS13B-212ENST00000524330 IGKV2D-40P01614 121 aaPredicted RBP7.61□□□□□ -1.19
VPS13B-212ENST00000524330 HOXD3P31249 432 aaPredicted RBP7.61□□□□□ -1.19
VPS13B-212ENST00000524330 RAB4BP61018 213 aa7.61□□□□□ -1.19
VPS13B-212ENST00000524330 RIGQ13278 110 aa7.61□□□□□ -1.19
VPS13B-212ENST00000524330 ACTL10Q5JWF8 245 aa7.61□□□□□ -1.19
VPS13B-212ENST00000524330 RBPMS2Q6ZRY4 209 aaKnown RBP7.61□□□□□ -1.19
VPS13B-212ENST00000524330 C9orf47Q6ZRZ4 202 aa7.61□□□□□ -1.19
VPS13B-212ENST00000524330 KLHL30-AS1Q8NEE0 82 aa7.61□□□□□ -1.19
VPS13B-212ENST00000524330 PPP1R14DQ9NXH3 145 aa7.61□□□□□ -1.19
VPS13B-212ENST00000524330 POLQO75417 2590 aa7.61□□□□□ -1.19
VPS13B-212ENST00000524330 TRBV7-9A0A0J9YWB2 115 aa7.6□□□□□ -1.19
VPS13B-212ENST00000524330 A0A1B0GUS0 222 aa7.6□□□□□ -1.19
VPS13B-212ENST00000524330 NPIPB6E9PJ23 425 aa7.6□□□□□ -1.19
VPS13B-212ENST00000524330 TCF21O43680 179 aa7.6□□□□□ -1.19
VPS13B-212ENST00000524330 TCL1AP56279 114 aa7.6□□□□□ -1.19
VPS13B-212ENST00000524330 NDUFA6P56556 154 aa7.6□□□□□ -1.19
VPS13B-212ENST00000524330 SYNJ2BPP57105 145 aa7.6□□□□□ -1.19
VPS13B-212ENST00000524330 HIST1H1AQ02539 215 aaPredicted RBP7.6□□□□□ -1.19
VPS13B-212ENST00000524330 KLF5Q13887 457 aaPredicted RBP7.6□□□□□ -1.19
VPS13B-212ENST00000524330 C10orf99Q6UWK7 81 aa7.6□□□□□ -1.19
VPS13B-212ENST00000524330 DYNLRB2Q8TF09 96 aa7.6□□□□□ -1.19
VPS13B-212ENST00000524330 WIPF2Q8TF74 440 aaPredicted RBP7.6□□□□□ -1.19
VPS13B-212ENST00000524330 ZC2HC1AQ96GY0 325 aa7.6□□□□□ -1.19
VPS13B-212ENST00000524330 TSSC4Q9Y5U2 329 aaPredicted RBP7.6□□□□□ -1.19
VPS13B-212ENST00000524330 FBN2P35556 2912 aa7.6□□□□□ -1.19
VPS13B-212ENST00000524330 TRAV2A0A0B4J234 112 aa7.59□□□□□ -1.19
VPS13B-212ENST00000524330 TRAV8-2A0A0B4J237 113 aa7.59□□□□□ -1.19
VPS13B-212ENST00000524330 TMEM213A2RRL7 107 aa7.59□□□□□ -1.19
VPS13B-212ENST00000524330 HIGD1CA8MV81 97 aa7.59□□□□□ -1.19
VPS13B-212ENST00000524330 SNURFLB1AK76 121 aa7.59□□□□□ -1.19
VPS13B-212ENST00000524330 DUSP14O95147 198 aaKnown RBP7.59□□□□□ -1.19
VPS13B-212ENST00000524330 TRGC1P0CF51 173 aa7.59□□□□□ -1.19
VPS13B-212ENST00000524330 CBLN1P23435 193 aa7.59□□□□□ -1.19
VPS13B-212ENST00000524330 S100A2P29034 98 aa7.59□□□□□ -1.19
VPS13B-212ENST00000524330 FABP9Q0Z7S8 132 aa7.59□□□□□ -1.19
VPS13B-212ENST00000524330 IGFL4Q6B9Z1 124 aa7.59□□□□□ -1.19
VPS13B-212ENST00000524330 RNF182Q8N6D2 247 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms