RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 TP53I11O14683 189 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 TCAPO15273 167 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 SERPINA7P05543 415 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 METTL15P1P0C7V9 234 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 RD3LP0DJH9 198 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 COX5BP10606 129 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 ESDP10768 282 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 GUCA1AP43080 201 aaPredicted RBP3.34□□□□□ -1.87
SKP1-213ENST00000524288 FGF12P61328 243 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 PCBD1P61457 104 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 HBG1P69891 147 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 HBG2P69892 147 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 MEF2BQ02080 365 aaPredicted RBP3.34□□□□□ -1.87
SKP1-213ENST00000524288 LY6EQ16553 131 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 DEFB133Q30KQ1 61 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 BSXQ3C1V8 233 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 C1orf194Q5T5A4 169 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 TMEM14EPQ6UXP3 125 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 SSX7Q7RTT5 188 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 ZNF664Q8N3J9 261 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 SPANXA2-OT1Q8N9U9 137 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 MAP1LC3BQ9GZQ8 125 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 WDR61Q9GZS3 305 aaKnown RBP3.34□□□□□ -1.87
SKP1-213ENST00000524288 PRORYQ9H606 182 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 WDR54Q9H977 334 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 RPRMQ9NS64 109 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 URGCP-MRPS24S4R325 110 aa3.34□□□□□ -1.87
SKP1-213ENST00000524288 TECTAO75443 2155 aa3.34□□□□□ -1.88
SKP1-213ENST00000524288 CEBPZOSA8MTT3 80 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 H7BYZ3 331 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 SYNGR2O43760 224 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 YPEL1O60688 119 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 PGLYRP1O75594 196 aaPredicted RBP3.33□□□□□ -1.88
SKP1-213ENST00000524288 OR2J2O76002 312 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 CST7O76096 145 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 IGKV1-5P01602 117 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 LINC00614P0C842 121 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 NTF3P20783 257 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 S100GP29377 79 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 PI4KAP42356 2102 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 DSCR4P56555 118 aaPredicted RBP3.33□□□□□ -1.88
SKP1-213ENST00000524288 TNFRSF9Q07011 255 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 PSG3Q16557 428 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 IQCJQ1A5X6 159 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 TMEM241Q24JQ0 296 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 FBXL19-AS1Q494R0 122 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 FAM222AQ5U5X8 452 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 C16orf47Q6ZP98 133 aaPredicted RBP3.33□□□□□ -1.88
SKP1-213ENST00000524288 NEGR1Q7Z3B1 354 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 TCTEX1D1Q8N7M0 179 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 OR2AE1Q8NHA4 323 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 MRPL30Q8TCC3 161 aaKnown RBP3.33□□□□□ -1.88
SKP1-213ENST00000524288 TNFRSF14Q92956 283 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 GPR146Q96CH1 333 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 YPEL2Q96QA6 119 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 SMIM7Q9BQ49 75 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 TXNDC17Q9BRA2 123 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 LINC00470Q9BZP3 86 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 OR2H1Q9GZK4 316 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 OR51B6Q9H340 312 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 OR51I2Q9H344 312 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 PRO1933Q9H354 126 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 LINC00574Q9H8X3 128 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 PROK2Q9HC23 129 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 GNG13Q9P2W3 67 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 CEP290O15078 2479 aa3.33□□□□□ -1.88
SKP1-213ENST00000524288 TANC2Q9HCD6 1990 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 MED12LQ86YW9 2145 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 MED12Q93074 2177 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 RTTNQ86VV8 2226 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 A0A0J9YW62 118 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 A0A1B0GV50 99 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 A8MUU9 505 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 A8MWL6 223 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 F6UZH7 168 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 M0R143 59 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 GZMHP20718 246 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 PSMB3P49720 205 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 YPEL3P61236 119 aaPredicted RBP3.32□□□□□ -1.88
SKP1-213ENST00000524288 RANP62826 216 aaKnown RBP3.32□□□□□ -1.88
SKP1-213ENST00000524288 PSG4Q00888 419 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 SLC38A11Q08AI6 406 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 TMEM267Q0VDI3 215 aaPredicted RBP3.32□□□□□ -1.88
SKP1-213ENST00000524288 ADIRFQ15847 76 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 PDZD11Q5EBL8 140 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 SLC25A34Q6PIV7 304 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 RPP25LQ8N5L8 163 aaKnown RBP3.32□□□□□ -1.88
SKP1-213ENST00000524288 MIR7-3HGQ8N6C7 128 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 OR2T10Q8NGZ9 312 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 SCGB1C1Q8TD33 95 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 APOBEC3DQ96AK3 386 aaPredicted RBP3.32□□□□□ -1.88
SKP1-213ENST00000524288 TMEM147Q9BVK8 224 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 SNHG12Q9BXW3 62 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 VSIRQ9H7M9 311 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 KLF13Q9Y2Y9 288 aaPredicted RBP3.32□□□□□ -1.88
SKP1-213ENST00000524288 LY96Q9Y6Y9 160 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 ARL2-SNX15V9GYD0 113 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 DSCAML1Q8TD84 2053 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 DOCK10Q96BY6 2186 aa3.32□□□□□ -1.88
SKP1-213ENST00000524288 ZNF407Q9C0G0 2248 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms