RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, human

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO28-205	ENST00000523990	PRAC2	D3DTV9	90 aa		13.68	□□□□□ -0.22
FBXO28-205	ENST00000523990	ZNF253	O75346	499 aa		13.68	□□□□□ -0.22
FBXO28-205	ENST00000523990	SPART-AS1	P0CW21	52 aa		13.68	□□□□□ -0.22
FBXO28-205	ENST00000523990	LGALS9C	Q6DKI2	356 aa		13.68	□□□□□ -0.22
FBXO28-205	ENST00000523990	KCNIP2	Q9NS61	270 aa		13.68	□□□□□ -0.22
FBXO28-205	ENST00000523990	TRBV19	A0A075B6N1	114 aa		13.67	□□□□□ -0.22
FBXO28-205	ENST00000523990	RPL12	P30050	165 aa	Known RBP	13.67	□□□□□ -0.22
FBXO28-205	ENST00000523990	APLN	Q9ULZ1	77 aa		13.67	□□□□□ -0.22
FBXO28-205	ENST00000523990	DEFB131B	A0A096LNP1	70 aa		13.66	□□□□□ -0.22
FBXO28-205	ENST00000523990	TEX48	A0A1B0GUV7	120 aa		13.66	□□□□□ -0.22
FBXO28-205	ENST00000523990	PYY	P10082	97 aa		13.66	□□□□□ -0.22
FBXO28-205	ENST00000523990	CDKN1B	P46527	198 aa		13.66	□□□□□ -0.22
FBXO28-205	ENST00000523990	FAM222A	Q5U5X8	452 aa		13.66	□□□□□ -0.22
FBXO28-205	ENST00000523990	SLC25A2	Q9BXI2	301 aa		13.66	□□□□□ -0.22
FBXO28-205	ENST00000523990	PPP1R14D	Q9NXH3	145 aa		13.66	□□□□□ -0.22
FBXO28-205	ENST00000523990	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.66	□□□□□ -0.22
FBXO28-205	ENST00000523990	IGHV4-4	A0A075B6R2	117 aa		13.65	□□□□□ -0.22
FBXO28-205	ENST00000523990	PRM2	P04554	102 aa		13.65	□□□□□ -0.22
FBXO28-205	ENST00000523990	HIST1H1E	P10412	219 aa	Known RBP	13.65	□□□□□ -0.22
FBXO28-205	ENST00000523990	PDE6H	Q13956	83 aa		13.65	□□□□□ -0.22
FBXO28-205	ENST00000523990	MIR17HG	Q75NE6	70 aa		13.65	□□□□□ -0.22
FBXO28-205	ENST00000523990	OR10J6P	Q8NGY7	276 aa		13.65	□□□□□ -0.22
FBXO28-205	ENST00000523990	FAM167A-AS1	Q96KT0	104 aa		13.65	□□□□□ -0.22
FBXO28-205	ENST00000523990	C17orf112	F2Z3M2	114 aa		13.64	□□□□□ -0.23
FBXO28-205	ENST00000523990	NDUFB4	O95168	129 aa		13.64	□□□□□ -0.23
FBXO28-205	ENST00000523990	TMEM256	Q8N2U0	113 aa		13.64	□□□□□ -0.23
FBXO28-205	ENST00000523990	RPP25L	Q8N5L8	163 aa	Known RBP	13.64	□□□□□ -0.23
FBXO28-205	ENST00000523990	MRPL53	Q96EL3	112 aa	Known RBP	13.64	□□□□□ -0.23
FBXO28-205	ENST00000523990	NIPSNAP3B	Q9BS92	247 aa		13.64	□□□□□ -0.23
FBXO28-205	ENST00000523990	MRPL32	Q9BYC8	188 aa	Known RBP	13.64	□□□□□ -0.23
FBXO28-205	ENST00000523990	SMIM3	Q9BZL3	60 aa		13.64	□□□□□ -0.23
FBXO28-205	ENST00000523990	DNAH2	Q9P225	4427 aa		13.64	□□□□□ -0.23
FBXO28-205	ENST00000523990	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.64	□□□□□ -0.23
FBXO28-205	ENST00000523990	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.64	□□□□□ -0.23
FBXO28-205	ENST00000523990		M0R3E3	92 aa		13.63	□□□□□ -0.23
FBXO28-205	ENST00000523990	TSPO	P30536	169 aa		13.63	□□□□□ -0.23
FBXO28-205	ENST00000523990	KIR3DS1	Q14943	382 aa		13.63	□□□□□ -0.23
FBXO28-205	ENST00000523990	BLNK	Q8WV28	456 aa		13.63	□□□□□ -0.23
FBXO28-205	ENST00000523990	NPIPB6	E9PJ23	425 aa		13.62	□□□□□ -0.23
FBXO28-205	ENST00000523990	OXA1L	Q15070	435 aa		13.62	□□□□□ -0.23
FBXO28-205	ENST00000523990	FCN2	Q15485	313 aa		13.62	□□□□□ -0.23
FBXO28-205	ENST00000523990	ODF3	Q96PU9	254 aa		13.62	□□□□□ -0.23
FBXO28-205	ENST00000523990	MED28	Q9H204	178 aa		13.62	□□□□□ -0.23
FBXO28-205	ENST00000523990	PLA2G2E	Q9NZK7	142 aa		13.62	□□□□□ -0.23
FBXO28-205	ENST00000523990	FUT9	Q9Y231	359 aa		13.62	□□□□□ -0.23
FBXO28-205	ENST00000523990	TIMM9	Q9Y5J7	89 aa		13.62	□□□□□ -0.23
FBXO28-205	ENST00000523990	PLAC8L1	A1L4L8	177 aa		13.61	□□□□□ -0.23
FBXO28-205	ENST00000523990	IFNA5	P01569	189 aa		13.61	□□□□□ -0.23
FBXO28-205	ENST00000523990	CT45A10	P0DMU9	189 aa		13.61	□□□□□ -0.23
FBXO28-205	ENST00000523990	AZU1	P20160	251 aa		13.61	□□□□□ -0.23
FBXO28-205	ENST00000523990	FFAR4	Q5NUL3	377 aa		13.61	□□□□□ -0.23
FBXO28-205	ENST00000523990	GFI1B	Q5VTD9	330 aa		13.61	□□□□□ -0.23
FBXO28-205	ENST00000523990	LINC01587	Q99440	93 aa		13.61	□□□□□ -0.23
FBXO28-205	ENST00000523990	C20orf144	Q9BQM9	153 aa		13.61	□□□□□ -0.23
FBXO28-205	ENST00000523990	OR51M1	Q9H341	326 aa		13.61	□□□□□ -0.23
FBXO28-205	ENST00000523990	WFDC1	Q9HC57	220 aa		13.61	□□□□□ -0.23
FBXO28-205	ENST00000523990	PRELID1	Q9Y255	219 aa		13.61	□□□□□ -0.23
FBXO28-205	ENST00000523990	TAS2R60	P59551	318 aa		13.6	□□□□□ -0.23
FBXO28-205	ENST00000523990	EXOC3-AS1	Q8N2X6	119 aa		13.6	□□□□□ -0.23
FBXO28-205	ENST00000523990	SCGB1C1	Q8TD33	95 aa		13.6	□□□□□ -0.23
FBXO28-205	ENST00000523990	FXYD5	Q96DB9	178 aa		13.6	□□□□□ -0.23
FBXO28-205	ENST00000523990	LYRM9	A8MSI8	78 aa		13.59	□□□□□ -0.23
FBXO28-205	ENST00000523990	PAXX	Q9BUH6	204 aa		13.59	□□□□□ -0.23
FBXO28-205	ENST00000523990	AAMDC	Q9H7C9	122 aa		13.59	□□□□□ -0.23
FBXO28-205	ENST00000523990		H7BYZ3	331 aa		13.58	□□□□□ -0.24
FBXO28-205	ENST00000523990	OR10J4	P0C629	311 aa		13.58	□□□□□ -0.24
FBXO28-205	ENST00000523990	NBEAP1	P0C6P0	100 aa		13.58	□□□□□ -0.24
FBXO28-205	ENST00000523990	DAD1	P61803	113 aa		13.58	□□□□□ -0.24
FBXO28-205	ENST00000523990	ICAM4	Q14773	271 aa		13.58	□□□□□ -0.24
FBXO28-205	ENST00000523990	ZNF503	Q96F45	646 aa		13.58	□□□□□ -0.24
FBXO28-205	ENST00000523990	NDUFAF3	Q9BU61	184 aa		13.58	□□□□□ -0.24
FBXO28-205	ENST00000523990	OR7C2	O60412	319 aa		13.57	□□□□□ -0.24
FBXO28-205	ENST00000523990	LEP	P41159	167 aa		13.57	□□□□□ -0.24
FBXO28-205	ENST00000523990	RNASE8	Q8TDE3	154 aa	Known RBP	13.57	□□□□□ -0.24
FBXO28-205	ENST00000523990	RNF141	Q8WVD5	230 aa		13.57	□□□□□ -0.24
FBXO28-205	ENST00000523990	PHYHIPL	Q96FC7	376 aa		13.57	□□□□□ -0.24
FBXO28-205	ENST00000523990	C16orf74	Q96GX8	76 aa		13.57	□□□□□ -0.24
FBXO28-205	ENST00000523990	HTN1	P15515	57 aa		13.56	□□□□□ -0.24
FBXO28-205	ENST00000523990	ERCC8	Q13216	396 aa		13.56	□□□□□ -0.24
FBXO28-205	ENST00000523990	TMEM263	Q8WUH6	116 aa	Known RBP	13.56	□□□□□ -0.24
FBXO28-205	ENST00000523990	AQP10	Q96PS8	301 aa		13.56	□□□□□ -0.24
FBXO28-205	ENST00000523990	HECTD4	Q9Y4D8	3996 aa		13.56	□□□□□ -0.24
FBXO28-205	ENST00000523990	BIRC6	Q9NR09	4857 aa		13.56	□□□□□ -0.24
FBXO28-205	ENST00000523990		J3KRW8	73 aa		13.56	□□□□□ -0.24
FBXO28-205	ENST00000523990	GIP	P09681	153 aa	Predicted RBP	13.56	□□□□□ -0.24
FBXO28-205	ENST00000523990	KHDC3L	Q587J8	217 aa		13.56	□□□□□ -0.24
FBXO28-205	ENST00000523990	FAM122C	Q6P4D5	195 aa		13.56	□□□□□ -0.24
FBXO28-205	ENST00000523990	ASB13	Q8WXK3	278 aa		13.56	□□□□□ -0.24
FBXO28-205	ENST00000523990	FAM210B	Q96KR6	192 aa		13.56	□□□□□ -0.24
FBXO28-205	ENST00000523990	FAM19A4	Q96LR4	140 aa		13.56	□□□□□ -0.24
FBXO28-205	ENST00000523990	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.55	□□□□□ -0.24
FBXO28-205	ENST00000523990	IGKV2D-40	P01614	121 aa	Predicted RBP	13.55	□□□□□ -0.24
FBXO28-205	ENST00000523990	HTN3	P15516	51 aa		13.55	□□□□□ -0.24
FBXO28-205	ENST00000523990	UBE2L3	P68036	154 aa	Known RBP	13.55	□□□□□ -0.24
FBXO28-205	ENST00000523990	RGS21	Q2M5E4	152 aa		13.55	□□□□□ -0.24
FBXO28-205	ENST00000523990		Q5BKY6	102 aa		13.55	□□□□□ -0.24
FBXO28-205	ENST00000523990	ZNF493	Q6ZR52	646 aa		13.55	□□□□□ -0.24
FBXO28-205	ENST00000523990	C9orf47	Q6ZRZ4	202 aa		13.55	□□□□□ -0.24
FBXO28-205	ENST00000523990	LINC00477	Q96M19	166 aa		13.55	□□□□□ -0.24
FBXO28-205	ENST00000523990	AGPAT4-IT1	Q9H0P7	198 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms