RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 SRIP30626 198 aa7.8□□□□□ -1.16
SDCBP-211ENST00000523441 RNASE4P34096 147 aaKnown RBP7.8□□□□□ -1.16
SDCBP-211ENST00000523441 CRYBA4P53673 196 aa7.8□□□□□ -1.16
SDCBP-211ENST00000523441 RPP30P78346 268 aaKnown RBP7.8□□□□□ -1.16
SDCBP-211ENST00000523441 BTN1A1Q13410 526 aa7.8□□□□□ -1.16
SDCBP-211ENST00000523441 LINC01620Q4KN68 170 aa7.8□□□□□ -1.16
SDCBP-211ENST00000523441 LCN15Q6UWW0 184 aa7.8□□□□□ -1.16
SDCBP-211ENST00000523441 C11orf72Q8NBR9 251 aa7.8□□□□□ -1.16
SDCBP-211ENST00000523441 NTN5Q8WTR8 489 aaPredicted RBP7.8□□□□□ -1.16
SDCBP-211ENST00000523441 ARV1Q9H2C2 271 aa7.8□□□□□ -1.16
SDCBP-211ENST00000523441 ZNF331Q9NQX6 463 aaPredicted RBP7.8□□□□□ -1.16
SDCBP-211ENST00000523441 PRO0255Q9UI72 69 aa7.8□□□□□ -1.16
SDCBP-211ENST00000523441 RCL1Q9Y2P8 373 aaKnown RBP7.8□□□□□ -1.16
SDCBP-211ENST00000523441 LRCOL1A6NCL2 159 aa7.79□□□□□ -1.16
SDCBP-211ENST00000523441 LECT2O14960 151 aa7.79□□□□□ -1.16
SDCBP-211ENST00000523441 RGS5O15539 181 aa7.79□□□□□ -1.16
SDCBP-211ENST00000523441 SYNGR2O43760 224 aa7.79□□□□□ -1.16
SDCBP-211ENST00000523441 MED6O75586 246 aa7.79□□□□□ -1.16
SDCBP-211ENST00000523441 SFTA3P0C7M3 94 aa7.79□□□□□ -1.16
SDCBP-211ENST00000523441 ANXA3P12429 323 aa7.79□□□□□ -1.16
SDCBP-211ENST00000523441 CD300CQ08708 224 aa7.79□□□□□ -1.16
SDCBP-211ENST00000523441 SLC38A11Q08AI6 406 aa7.79□□□□□ -1.16
SDCBP-211ENST00000523441 ERCC8Q13216 396 aa7.79□□□□□ -1.16
SDCBP-211ENST00000523441 PATE2Q6UY27 113 aa7.79□□□□□ -1.16
SDCBP-211ENST00000523441 ZNF680Q8NEM1 530 aa7.79□□□□□ -1.16
SDCBP-211ENST00000523441 PCNPQ8WW12 178 aaKnown RBP7.79□□□□□ -1.16
SDCBP-211ENST00000523441 ST6GAL2Q96JF0 529 aa7.79□□□□□ -1.16
SDCBP-211ENST00000523441 PRRT1Q99946 306 aa7.79□□□□□ -1.16
SDCBP-211ENST00000523441 SLC50A1Q9BRV3 221 aa7.79□□□□□ -1.16
SDCBP-211ENST00000523441 TP53TG3Q9ULZ0 132 aa7.79□□□□□ -1.16
SDCBP-211ENST00000523441 STRAPQ9Y3F4 350 aaKnown RBP7.79□□□□□ -1.16
SDCBP-211ENST00000523441 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.78□□□□□ -1.16
SDCBP-211ENST00000523441 C7orf71A4D174 169 aa7.78□□□□□ -1.16
SDCBP-211ENST00000523441 K7EQD1 137 aa7.78□□□□□ -1.16
SDCBP-211ENST00000523441 SPINK4O60575 86 aa7.78□□□□□ -1.16
SDCBP-211ENST00000523441 CCNKO75909 580 aa7.78□□□□□ -1.16
SDCBP-211ENST00000523441 GYPEP15421 78 aa7.78□□□□□ -1.16
SDCBP-211ENST00000523441 FHL2Q14192 279 aa7.78□□□□□ -1.16
SDCBP-211ENST00000523441 TEPPQ6URK8 271 aa7.78□□□□□ -1.16
SDCBP-211ENST00000523441 LINC00305Q7Z4B0 112 aa7.78□□□□□ -1.16
SDCBP-211ENST00000523441 EIF4E3Q8N5X7 224 aaKnown RBP7.78□□□□□ -1.16
SDCBP-211ENST00000523441 FUNDC2Q9BWH2 189 aa7.78□□□□□ -1.16
SDCBP-211ENST00000523441 VCX3AQ9NNX9 186 aa7.78□□□□□ -1.16
SDCBP-211ENST00000523441 MRPS12O15235 138 aaKnown RBP7.77□□□□□ -1.17
SDCBP-211ENST00000523441 PITX3O75364 302 aa7.77□□□□□ -1.17
SDCBP-211ENST00000523441 HOXB5P09067 269 aa7.77□□□□□ -1.17
SDCBP-211ENST00000523441 VAMP1P23763 118 aa7.77□□□□□ -1.17
SDCBP-211ENST00000523441 Q6ZQT7 251 aa7.77□□□□□ -1.17
SDCBP-211ENST00000523441 AP3S1Q92572 193 aa7.77□□□□□ -1.17
SDCBP-211ENST00000523441 CIB3Q96Q77 187 aaPredicted RBP7.77□□□□□ -1.17
SDCBP-211ENST00000523441 RGS13O14921 159 aa7.76□□□□□ -1.17
SDCBP-211ENST00000523441 IGHV3-30P01768 117 aa7.76□□□□□ -1.17
SDCBP-211ENST00000523441 IGHV3-33P01772 117 aa7.76□□□□□ -1.17
SDCBP-211ENST00000523441 IGHV3-30-3P0DP02 117 aa7.76□□□□□ -1.17
SDCBP-211ENST00000523441 IGHV3-30-5P0DP03 117 aa7.76□□□□□ -1.17
SDCBP-211ENST00000523441 TCL1AP56279 114 aa7.76□□□□□ -1.17
SDCBP-211ENST00000523441 SRPXP78539 464 aa7.76□□□□□ -1.17
SDCBP-211ENST00000523441 IL18Q14116 193 aa7.76□□□□□ -1.17
SDCBP-211ENST00000523441 MORN5Q5VZ52 161 aa7.76□□□□□ -1.17
SDCBP-211ENST00000523441 S100A7AQ86SG5 101 aa7.76□□□□□ -1.17
SDCBP-211ENST00000523441 BPIFA4PQ86YQ2 179 aa7.76□□□□□ -1.17
SDCBP-211ENST00000523441 C15orf40Q8WUR7 153 aa7.76□□□□□ -1.17
SDCBP-211ENST00000523441 ARPC5LQ9BPX5 153 aa7.76□□□□□ -1.17
SDCBP-211ENST00000523441 MIXL1Q9H2W2 232 aa7.76□□□□□ -1.17
SDCBP-211ENST00000523441 SCP2D1Q9UJQ7 156 aa7.76□□□□□ -1.17
SDCBP-211ENST00000523441 LOC100131303A0A0U1RQF7 123 aa7.75□□□□□ -1.17
SDCBP-211ENST00000523441 H3BQ15 152 aa7.75□□□□□ -1.17
SDCBP-211ENST00000523441 GOSR2O14653 212 aa7.75□□□□□ -1.17
SDCBP-211ENST00000523441 COX7A2P2O60397 106 aa7.75□□□□□ -1.17
SDCBP-211ENST00000523441 MPDU1O75352 247 aa7.75□□□□□ -1.17
SDCBP-211ENST00000523441 SLC25A5P05141 298 aaKnown RBP7.75□□□□□ -1.17
SDCBP-211ENST00000523441 GPX1P07203 203 aa7.75□□□□□ -1.17
SDCBP-211ENST00000523441 CXCL2P19875 107 aa7.75□□□□□ -1.17
SDCBP-211ENST00000523441 WFDC2Q14508 124 aa7.75□□□□□ -1.17
SDCBP-211ENST00000523441 SCXQ7RTU7 201 aa7.75□□□□□ -1.17
SDCBP-211ENST00000523441 C10orf126Q8N4M7 172 aa7.75□□□□□ -1.17
SDCBP-211ENST00000523441 NHLRC2Q8NBF2 726 aa7.75□□□□□ -1.17
SDCBP-211ENST00000523441 ZNF479Q96JC4 524 aa7.75□□□□□ -1.17
SDCBP-211ENST00000523441 SCGB3A2Q96PL1 93 aa7.75□□□□□ -1.17
SDCBP-211ENST00000523441 NAA50Q9GZZ1 169 aaKnown RBP7.75□□□□□ -1.17
SDCBP-211ENST00000523441 PSENENQ9NZ42 101 aa7.75□□□□□ -1.17
SDCBP-211ENST00000523441 CCDC59Q9P031 241 aaKnown RBP7.75□□□□□ -1.17
SDCBP-211ENST00000523441 TRAV5A0A0B4J249 113 aa7.74□□□□□ -1.17
SDCBP-211ENST00000523441 A6NJY4 79 aa7.74□□□□□ -1.17
SDCBP-211ENST00000523441 M0R3E3 92 aa7.74□□□□□ -1.17
SDCBP-211ENST00000523441 SSSCA1O60232 199 aa7.74□□□□□ -1.17
SDCBP-211ENST00000523441 ATP6V1G2O95670 118 aa7.74□□□□□ -1.17
SDCBP-211ENST00000523441 OXTP01178 125 aa7.74□□□□□ -1.17
SDCBP-211ENST00000523441 IGLV2-8P01709 118 aa7.74□□□□□ -1.17
SDCBP-211ENST00000523441 METTL15P1P0C7V9 234 aa7.74□□□□□ -1.17
SDCBP-211ENST00000523441 PPT1P50897 306 aa7.74□□□□□ -1.17
SDCBP-211ENST00000523441 PLP1P60201 277 aa7.74□□□□□ -1.17
SDCBP-211ENST00000523441 SELENOTP62341 195 aa7.74□□□□□ -1.17
SDCBP-211ENST00000523441 POLR2GP62487 172 aaKnown RBP eCLIP7.74□□□□□ -1.17
SDCBP-211ENST00000523441 SSBP1Q04837 148 aaKnown RBP7.74□□□□□ -1.17
SDCBP-211ENST00000523441 SLAQ13239 276 aa7.74□□□□□ -1.17
SDCBP-211ENST00000523441 OPCMLQ14982 345 aa7.74□□□□□ -1.17
SDCBP-211ENST00000523441 SMIM4Q8WVI0 70 aa7.74□□□□□ -1.17
SDCBP-211ENST00000523441 VGLL1Q99990 258 aa7.74□□□□□ -1.17
SDCBP-211ENST00000523441 MRPL32Q9BYC8 188 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms