RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 TMEM256Q8N2U0 113 aa10.4□□□□□ -0.74
PCDHGB1-201ENST00000523390 SCGB3A1Q96QR1 104 aa10.4□□□□□ -0.74
PCDHGB1-201ENST00000523390 DAZ1Q9NQZ3 744 aaKnown RBP10.4□□□□□ -0.74
PCDHGB1-201ENST00000523390 IGHV4-30-2A0A087WSY4 118 aa10.4□□□□□ -0.74
PCDHGB1-201ENST00000523390 SAP30O75446 220 aa10.4□□□□□ -0.74
PCDHGB1-201ENST00000523390 HOXB4P17483 251 aaPredicted RBP10.4□□□□□ -0.74
PCDHGB1-201ENST00000523390 TRAV8-6A0A0B4J262 113 aa10.4□□□□□ -0.74
PCDHGB1-201ENST00000523390 EREGO14944 169 aa10.4□□□□□ -0.74
PCDHGB1-201ENST00000523390 LINC00614P0C842 121 aa10.4□□□□□ -0.74
PCDHGB1-201ENST00000523390 LEPP41159 167 aa10.4□□□□□ -0.74
PCDHGB1-201ENST00000523390 RITA1Q96K30 269 aa10.4□□□□□ -0.74
PCDHGB1-201ENST00000523390 SLC25A2Q9BXI2 301 aa10.4□□□□□ -0.74
PCDHGB1-201ENST00000523390 TRGV2A0A075B6R0 118 aa10.4□□□□□ -0.75
PCDHGB1-201ENST00000523390 IL17RELQ6ZVW7 336 aa10.4□□□□□ -0.75
PCDHGB1-201ENST00000523390 C8orf31Q8N9H6 132 aa10.4□□□□□ -0.75
PCDHGB1-201ENST00000523390 PRDM13Q9H4Q3 707 aa10.4□□□□□ -0.75
PCDHGB1-201ENST00000523390 RANBP2P49792 3224 aaKnown RBP10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 PRR20EP86478 221 aa10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 PRR20CP86479 221 aa10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 PRR20DP86480 221 aa10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 PRR20BP86481 221 aa10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 PRR20AP86496 221 aa10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 C1orf122Q6ZSJ8 110 aa10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 ATP5L2Q7Z4Y8 100 aa10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 PPP1R17O96001 155 aa10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 PRSS2P07478 247 aa10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 SMAGPQ0VAQ4 97 aa10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 FBXL19-AS1Q494R0 122 aa10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 TMEM170BQ5T4T1 132 aa10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 ZNF114Q8NC26 417 aa10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 JMJD1CQ15652 2540 aa10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 CHD7Q9P2D1 2997 aa10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 TRAV12-3A0A0B4J271 114 aa10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 FXYD7P58549 80 aa10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 OR10J3Q5JRS4 329 aa10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 NIT1Q86X76 327 aa10.39□□□□□ -0.75
PCDHGB1-201ENST00000523390 J3QR89 54 aa10.38□□□□□ -0.75
PCDHGB1-201ENST00000523390 OR11H6Q8NGC7 330 aa10.38□□□□□ -0.75
PCDHGB1-201ENST00000523390 LRRK2Q5S007 2527 aa10.38□□□□□ -0.75
PCDHGB1-201ENST00000523390 TRBV19A0A075B6N1 114 aa10.38□□□□□ -0.75
PCDHGB1-201ENST00000523390 F2Z2F3 143 aa10.38□□□□□ -0.75
PCDHGB1-201ENST00000523390 IGLV2-14P01704 120 aa10.38□□□□□ -0.75
PCDHGB1-201ENST00000523390 PDE6HQ13956 83 aa10.38□□□□□ -0.75
PCDHGB1-201ENST00000523390 EML5Q05BV3 1969 aa10.38□□□□□ -0.75
PCDHGB1-201ENST00000523390 ATP5LO75964 103 aa10.38□□□□□ -0.75
PCDHGB1-201ENST00000523390 ACTL10Q5JWF8 245 aa10.38□□□□□ -0.75
PCDHGB1-201ENST00000523390 GEMIN7Q9H840 131 aaKnown RBP10.38□□□□□ -0.75
PCDHGB1-201ENST00000523390 OR11H12B2RN74 326 aa10.38□□□□□ -0.75
PCDHGB1-201ENST00000523390 OR11H1Q8NG94 326 aa10.38□□□□□ -0.75
PCDHGB1-201ENST00000523390 OR11H2Q8NH07 326 aa10.38□□□□□ -0.75
PCDHGB1-201ENST00000523390 HTN3P15516 51 aa10.37□□□□□ -0.75
PCDHGB1-201ENST00000523390 C12orf54Q6X4T0 127 aa10.37□□□□□ -0.75
PCDHGB1-201ENST00000523390 DEFB104AQ8WTQ1 72 aa10.37□□□□□ -0.75
PCDHGB1-201ENST00000523390 UNC80Q8N2C7 3258 aa10.37□□□□□ -0.75
PCDHGB1-201ENST00000523390 GTF2H5Q6ZYL4 71 aa10.37□□□□□ -0.75
PCDHGB1-201ENST00000523390 Q71RC1 249 aaPredicted RBP10.37□□□□□ -0.75
PCDHGB1-201ENST00000523390 RAB37Q96AX2 223 aa10.37□□□□□ -0.75
PCDHGB1-201ENST00000523390 D6R8Y8 96 aa10.37□□□□□ -0.75
PCDHGB1-201ENST00000523390 PPBPP02775 128 aa10.37□□□□□ -0.75
PCDHGB1-201ENST00000523390 DMRTA1Q5VZB9 504 aa10.37□□□□□ -0.75
PCDHGB1-201ENST00000523390 LOC102724200A0A096LPH7 203 aaPredicted RBP10.36□□□□□ -0.75
PCDHGB1-201ENST00000523390 PFN1P07737 140 aaKnown RBP10.36□□□□□ -0.75
PCDHGB1-201ENST00000523390 ASPHD1Q5U4P2 390 aa10.36□□□□□ -0.75
PCDHGB1-201ENST00000523390 HIST1H4GQ99525 98 aa10.36□□□□□ -0.75
PCDHGB1-201ENST00000523390 RPL24P83731 157 aaKnown RBP10.36□□□□□ -0.75
PCDHGB1-201ENST00000523390 PAPPA-AS1Q5QFB9 102 aa10.36□□□□□ -0.75
PCDHGB1-201ENST00000523390 UTF1Q5T230 341 aa10.36□□□□□ -0.75
PCDHGB1-201ENST00000523390 LINC00477Q96M19 166 aa10.36□□□□□ -0.75
PCDHGB1-201ENST00000523390 ABCA12Q86UK0 2595 aa10.36□□□□□ -0.75
PCDHGB1-201ENST00000523390 CRXO43186 299 aaPredicted RBP10.36□□□□□ -0.75
PCDHGB1-201ENST00000523390 IGHV4-59P01825 116 aa10.36□□□□□ -0.75
PCDHGB1-201ENST00000523390 THAP8Q8NA92 274 aa10.36□□□□□ -0.75
PCDHGB1-201ENST00000523390 ARHGAP32A7KAX9 2087 aa10.36□□□□□ -0.75
PCDHGB1-201ENST00000523390 H7C2G1 150 aa10.36□□□□□ -0.75
PCDHGB1-201ENST00000523390 IGHV4-38-2P0DP08 117 aa10.36□□□□□ -0.75
PCDHGB1-201ENST00000523390 PLA2G5P39877 138 aa10.36□□□□□ -0.75
PCDHGB1-201ENST00000523390 DEFB112Q30KQ8 113 aa10.36□□□□□ -0.75
PCDHGB1-201ENST00000523390 DNLZQ5SXM8 178 aa10.36□□□□□ -0.75
PCDHGB1-201ENST00000523390 ST20Q9HBF5 79 aa10.36□□□□□ -0.75
PCDHGB1-201ENST00000523390 HBDP02042 147 aa10.35□□□□□ -0.75
PCDHGB1-201ENST00000523390 LGALS3P17931 250 aaKnown RBP10.35□□□□□ -0.75
PCDHGB1-201ENST00000523390 LSM4Q9Y4Z0 139 aaKnown RBP10.35□□□□□ -0.75
PCDHGB1-201ENST00000523390 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.35□□□□□ -0.75
PCDHGB1-201ENST00000523390 PROP1O75360 226 aa10.35□□□□□ -0.75
PCDHGB1-201ENST00000523390 ZFP36P26651 326 aaKnown RBP10.35□□□□□ -0.75
PCDHGB1-201ENST00000523390 CACNG7P62955 275 aa10.35□□□□□ -0.75
PCDHGB1-201ENST00000523390 TMEM249Q2WGJ8 235 aa10.35□□□□□ -0.75
PCDHGB1-201ENST00000523390 ZNF491Q8N8L2 437 aa10.35□□□□□ -0.75
PCDHGB1-201ENST00000523390 MIEN1Q9BRT3 115 aa10.35□□□□□ -0.75
PCDHGB1-201ENST00000523390 JKAMPQ9P055 326 aa10.35□□□□□ -0.75
PCDHGB1-201ENST00000523390 CENPVL3A0A0U1RRI6 287 aa10.35□□□□□ -0.75
PCDHGB1-201ENST00000523390 A8MWP6 167 aa10.35□□□□□ -0.75
PCDHGB1-201ENST00000523390 TMEM262E9PQX1 116 aa10.35□□□□□ -0.75
PCDHGB1-201ENST00000523390 IGLV1-47P01700 117 aa10.35□□□□□ -0.75
PCDHGB1-201ENST00000523390 ARMS2P0C7Q2 107 aa10.34□□□□□ -0.75
PCDHGB1-201ENST00000523390 LYRM7Q5U5X0 104 aa10.34□□□□□ -0.75
PCDHGB1-201ENST00000523390 ODF3L1Q8IXM7 274 aa10.34□□□□□ -0.75
PCDHGB1-201ENST00000523390 NXT2Q9NPJ8 142 aaKnown RBP10.34□□□□□ -0.75
PCDHGB1-201ENST00000523390 PCP4P48539 62 aa10.34□□□□□ -0.75
PCDHGB1-201ENST00000523390 DEFB131AP59861 70 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms