RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 SLC39A9Q9NUM3 307 aa7.89□□□□□ -1.15
PVT1-216ENST00000523068 CTXND1A0A1B0GTU2 59 aa7.88□□□□□ -1.15
PVT1-216ENST00000523068 SOCS3O14543 225 aa7.88□□□□□ -1.15
PVT1-216ENST00000523068 CDC34P49427 236 aaPredicted RBP7.88□□□□□ -1.15
PVT1-216ENST00000523068 GDF5OSQ5U4N7 250 aa7.88□□□□□ -1.15
PVT1-216ENST00000523068 EBLN2Q6P2I7 272 aa7.88□□□□□ -1.15
PVT1-216ENST00000523068 FAM122CQ6P4D5 195 aa7.88□□□□□ -1.15
PVT1-216ENST00000523068 SLC7A5P1Q8MH63 180 aa7.88□□□□□ -1.15
PVT1-216ENST00000523068 OR1L4Q8NGR5 311 aa7.88□□□□□ -1.15
PVT1-216ENST00000523068 C16orf92Q96LL3 132 aa7.88□□□□□ -1.15
PVT1-216ENST00000523068 RFNGQ9Y644 331 aa7.88□□□□□ -1.15
PVT1-216ENST00000523068 ELOA3CA0A087WX78 387 aaPredicted RBP7.87□□□□□ -1.15
PVT1-216ENST00000523068 TRAV10A0A0B4J240 114 aa7.87□□□□□ -1.15
PVT1-216ENST00000523068 RAB19A4D1S5 217 aa7.87□□□□□ -1.15
PVT1-216ENST00000523068 TMEM189A5PLL7 270 aa7.87□□□□□ -1.15
PVT1-216ENST00000523068 MAP1LC3B2A6NCE7 125 aa7.87□□□□□ -1.15
PVT1-216ENST00000523068 SMIM9A6NGZ8 99 aa7.87□□□□□ -1.15
PVT1-216ENST00000523068 IGLL5B9A064 214 aa7.87□□□□□ -1.15
PVT1-216ENST00000523068 COX7A2P2O60397 106 aa7.87□□□□□ -1.15
PVT1-216ENST00000523068 IFNA1P01562 189 aa7.87□□□□□ -1.15
PVT1-216ENST00000523068 IGKV3-20P01619 116 aa7.87□□□□□ -1.15
PVT1-216ENST00000523068 S100A1P23297 94 aa7.87□□□□□ -1.15
PVT1-216ENST00000523068 GATA2P23769 480 aaPredicted RBP7.87□□□□□ -1.15
PVT1-216ENST00000523068 HLA-DMBP28068 263 aa7.87□□□□□ -1.15
PVT1-216ENST00000523068 FHITP49789 147 aa7.87□□□□□ -1.15
PVT1-216ENST00000523068 RHOBP62745 196 aa7.87□□□□□ -1.15
PVT1-216ENST00000523068 OR4B1Q8NGF8 309 aa7.87□□□□□ -1.15
PVT1-216ENST00000523068 SFT2D1Q8WV19 159 aa7.87□□□□□ -1.15
PVT1-216ENST00000523068 PFDN5Q99471 154 aa7.87□□□□□ -1.15
PVT1-216ENST00000523068 NEU1Q99519 415 aa7.87□□□□□ -1.15
PVT1-216ENST00000523068 MAP1LC3BQ9GZQ8 125 aa7.87□□□□□ -1.15
PVT1-216ENST00000523068 RNF24Q9Y225 148 aa7.87□□□□□ -1.15
PVT1-216ENST00000523068 EPPK1P58107 5090 aaKnown RBP7.87□□□□□ -1.15
PVT1-216ENST00000523068 A0A0J9YX75 114 aa7.86□□□□□ -1.15
PVT1-216ENST00000523068 HYPMO75409 117 aa7.86□□□□□ -1.15
PVT1-216ENST00000523068 LINC00869P0C866 280 aa7.86□□□□□ -1.15
PVT1-216ENST00000523068 TAS2R45P59539 299 aa7.86□□□□□ -1.15
PVT1-216ENST00000523068 PLP1P60201 277 aa7.86□□□□□ -1.15
PVT1-216ENST00000523068 PRR20EP86478 221 aa7.86□□□□□ -1.15
PVT1-216ENST00000523068 PRR20CP86479 221 aa7.86□□□□□ -1.15
PVT1-216ENST00000523068 PRR20DP86480 221 aa7.86□□□□□ -1.15
PVT1-216ENST00000523068 PRR20BP86481 221 aa7.86□□□□□ -1.15
PVT1-216ENST00000523068 PRR20AP86496 221 aa7.86□□□□□ -1.15
PVT1-216ENST00000523068 PSG9Q00887 426 aa7.86□□□□□ -1.15
PVT1-216ENST00000523068 UQCC3Q6UW78 93 aa7.86□□□□□ -1.15
PVT1-216ENST00000523068 LCN15Q6UWW0 184 aa7.86□□□□□ -1.15
PVT1-216ENST00000523068 ZNF705AQ6ZN79 300 aaPredicted RBP7.86□□□□□ -1.15
PVT1-216ENST00000523068 Q6ZTC4 211 aa7.86□□□□□ -1.15
PVT1-216ENST00000523068 MRPL32Q9BYC8 188 aaKnown RBP7.86□□□□□ -1.15
PVT1-216ENST00000523068 HIGD1AQ9Y241 93 aa7.86□□□□□ -1.15
PVT1-216ENST00000523068 TRAV1-1A0A0B4J248 108 aa7.85□□□□□ -1.15
PVT1-216ENST00000523068 A0A1B0GV50 99 aa7.85□□□□□ -1.15
PVT1-216ENST00000523068 ZNF705FA8MVS1 300 aaPredicted RBP7.85□□□□□ -1.15
PVT1-216ENST00000523068 ZNF705DP0CH99 300 aaPredicted RBP7.85□□□□□ -1.15
PVT1-216ENST00000523068 ZNF705BP0CI00 300 aaPredicted RBP7.85□□□□□ -1.15
PVT1-216ENST00000523068 RPL7P18124 248 aaKnown RBP7.85□□□□□ -1.15
PVT1-216ENST00000523068 PPT1P50897 306 aa7.85□□□□□ -1.15
PVT1-216ENST00000523068 FXYD7P58549 80 aa7.85□□□□□ -1.15
PVT1-216ENST00000523068 DEFB1P60022 68 aa7.85□□□□□ -1.15
PVT1-216ENST00000523068 FAM78BQ5VT40 261 aa7.85□□□□□ -1.15
PVT1-216ENST00000523068 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.85□□□□□ -1.15
PVT1-216ENST00000523068 IQCF2Q8IXL9 164 aa7.85□□□□□ -1.15
PVT1-216ENST00000523068 LYPD6BQ8NI32 183 aa7.85□□□□□ -1.15
PVT1-216ENST00000523068 MBD3L1Q8WWY6 194 aa7.85□□□□□ -1.15
PVT1-216ENST00000523068 SHANK2-AS3Q9BTD1 123 aa7.85□□□□□ -1.15
PVT1-216ENST00000523068 SLC25A39Q9BZJ4 359 aaPredicted RBP7.85□□□□□ -1.15
PVT1-216ENST00000523068 DOK5Q9P104 306 aa7.85□□□□□ -1.15
PVT1-216ENST00000523068 GOLT1BQ9Y3E0 138 aa7.85□□□□□ -1.15
PVT1-216ENST00000523068 IGHV3OR16-12A0A075B7B8 117 aa7.84□□□□□ -1.15
PVT1-216ENST00000523068 TEX48A0A1B0GUV7 120 aa7.84□□□□□ -1.15
PVT1-216ENST00000523068 H3BRN7 92 aa7.84□□□□□ -1.15
PVT1-216ENST00000523068 DUSP14O95147 198 aaKnown RBP7.84□□□□□ -1.15
PVT1-216ENST00000523068 OR5G3P0C626 314 aa7.84□□□□□ -1.15
PVT1-216ENST00000523068 SPART-AS1P0CW21 52 aa7.84□□□□□ -1.15
PVT1-216ENST00000523068 TAGLN2P37802 199 aaKnown RBP7.84□□□□□ -1.15
PVT1-216ENST00000523068 PEA15Q15121 130 aa7.84□□□□□ -1.15
PVT1-216ENST00000523068 C12orf74Q32Q52 190 aa7.84□□□□□ -1.15
PVT1-216ENST00000523068 KHDC3LQ587J8 217 aa7.84□□□□□ -1.15
PVT1-216ENST00000523068 C10orf113Q5VZT2 155 aa7.84□□□□□ -1.15
PVT1-216ENST00000523068 RPP25LQ8N5L8 163 aaKnown RBP7.84□□□□□ -1.15
PVT1-216ENST00000523068 EIF4E3Q8N5X7 224 aaKnown RBP7.84□□□□□ -1.15
PVT1-216ENST00000523068 RAB24Q969Q5 203 aa7.84□□□□□ -1.15
PVT1-216ENST00000523068 C20orf173Q96LM9 149 aa7.84□□□□□ -1.15
PVT1-216ENST00000523068 SCRT1Q9BWW7 348 aa7.84□□□□□ -1.15
PVT1-216ENST00000523068 EIF5A2Q9GZV4 153 aaKnown RBP7.84□□□□□ -1.15
PVT1-216ENST00000523068 SLC35B3Q9H1N7 401 aa7.84□□□□□ -1.15
PVT1-216ENST00000523068 TREM1Q9NP99 234 aa7.84□□□□□ -1.15
PVT1-216ENST00000523068 APLNQ9ULZ1 77 aa7.84□□□□□ -1.15
PVT1-216ENST00000523068 CELA1Q9UNI1 258 aa7.84□□□□□ -1.15
PVT1-216ENST00000523068 FUT9Q9Y231 359 aa7.84□□□□□ -1.15
PVT1-216ENST00000523068 KMT2AQ03164 3969 aa7.83□□□□□ -1.16
PVT1-216ENST00000523068 IGHV4-4A0A075B6R2 117 aa7.83□□□□□ -1.16
PVT1-216ENST00000523068 DEFB131BA0A096LNP1 70 aa7.83□□□□□ -1.16
PVT1-216ENST00000523068 A8MTW9 85 aa7.83□□□□□ -1.16
PVT1-216ENST00000523068 F6UB75 175 aa7.83□□□□□ -1.16
PVT1-216ENST00000523068 CXorf1O96002 111 aa7.83□□□□□ -1.16
PVT1-216ENST00000523068 AMBPP02760 352 aa7.83□□□□□ -1.16
PVT1-216ENST00000523068 ZNF726P1Q15940 193 aa7.83□□□□□ -1.16
PVT1-216ENST00000523068 GCSAMLQ5JQS6 135 aa7.83□□□□□ -1.16
PVT1-216ENST00000523068 TOR2AQ5JU69 321 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms