RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 RPL11P62913 178 aaKnown RBP9.83□□□□□ -0.84
CPNE3-205ENST00000522240 SUMO1P63165 101 aaKnown RBP9.83□□□□□ -0.84
CPNE3-205ENST00000522240 PAFAH1B2P68402 229 aa9.83□□□□□ -0.84
CPNE3-205ENST00000522240 SLC7A5P1Q8MH63 180 aa9.83□□□□□ -0.84
CPNE3-205ENST00000522240 DCANP1Q8TF63 244 aa9.83□□□□□ -0.84
CPNE3-205ENST00000522240 C16orf92Q96LL3 132 aa9.83□□□□□ -0.84
CPNE3-205ENST00000522240 MS4A6AQ9H2W1 248 aa9.83□□□□□ -0.84
CPNE3-205ENST00000522240 K7EQG2 157 aa9.82□□□□□ -0.84
CPNE3-205ENST00000522240 IGLV1-51P01701 117 aa9.82□□□□□ -0.84
CPNE3-205ENST00000522240 SLC25A5P05141 298 aaKnown RBP9.82□□□□□ -0.84
CPNE3-205ENST00000522240 RBPMS2Q6ZRY4 209 aaKnown RBP9.82□□□□□ -0.84
CPNE3-205ENST00000522240 TMEM61Q8N0U2 210 aa9.82□□□□□ -0.84
CPNE3-205ENST00000522240 EXOC3-AS1Q8N2X6 119 aa9.82□□□□□ -0.84
CPNE3-205ENST00000522240 CMTM2Q8TAZ6 248 aa9.82□□□□□ -0.84
CPNE3-205ENST00000522240 HIST1H2BAQ96A08 127 aa9.82□□□□□ -0.84
CPNE3-205ENST00000522240 RPUSD4Q96CM3 377 aaKnown RBP9.82□□□□□ -0.84
CPNE3-205ENST00000522240 SPAG8Q99932 426 aaPredicted RBP9.82□□□□□ -0.84
CPNE3-205ENST00000522240 MCRIP2Q9BUT9 160 aaKnown RBP9.82□□□□□ -0.84
CPNE3-205ENST00000522240 SLC35B3Q9H1N7 401 aa9.82□□□□□ -0.84
CPNE3-205ENST00000522240 TRAV8-2A0A0B4J237 113 aa9.81□□□□□ -0.84
CPNE3-205ENST00000522240 SERTM2A0A1B0GWG4 89 aa9.81□□□□□ -0.84
CPNE3-205ENST00000522240 SCO2A0A1W2PP80 73 aa9.81□□□□□ -0.84
CPNE3-205ENST00000522240 C9JQL5 133 aa9.81□□□□□ -0.84
CPNE3-205ENST00000522240 DNASE2O00115 360 aaPredicted RBP9.81□□□□□ -0.84
CPNE3-205ENST00000522240 PEX7O00628 323 aa9.81□□□□□ -0.84
CPNE3-205ENST00000522240 ID1P41134 155 aa9.81□□□□□ -0.84
CPNE3-205ENST00000522240 CSN1S1P47710 185 aa9.81□□□□□ -0.84
CPNE3-205ENST00000522240 CD300EQ496F6 205 aaPredicted RBP9.81□□□□□ -0.84
CPNE3-205ENST00000522240 C9orf66Q5T8R8 295 aa9.81□□□□□ -0.84
CPNE3-205ENST00000522240 LCN12Q6JVE5 192 aa9.81□□□□□ -0.84
CPNE3-205ENST00000522240 CYB561D1Q8N8Q1 229 aa9.81□□□□□ -0.84
CPNE3-205ENST00000522240 WFDC9Q8NEX5 89 aa9.81□□□□□ -0.84
CPNE3-205ENST00000522240 ATG101Q9BSB4 218 aa9.81□□□□□ -0.84
CPNE3-205ENST00000522240 EPDR1Q9UM22 224 aa9.81□□□□□ -0.84
CPNE3-205ENST00000522240 WNK1Q9H4A3 2382 aa9.8□□□□□ -0.84
CPNE3-205ENST00000522240 IGKV3-7A0A075B6H7 116 aa9.8□□□□□ -0.84
CPNE3-205ENST00000522240 TMEM218A2RU14 115 aa9.8□□□□□ -0.84
CPNE3-205ENST00000522240 OR4C46A6NHA9 309 aa9.8□□□□□ -0.84
CPNE3-205ENST00000522240 WIPF1O43516 503 aa9.8□□□□□ -0.84
CPNE3-205ENST00000522240 SFTA3P0C7M3 94 aa9.8□□□□□ -0.84
CPNE3-205ENST00000522240 PSG3Q16557 428 aa9.8□□□□□ -0.84
CPNE3-205ENST00000522240 C2CD4CQ8TF44 421 aa9.8□□□□□ -0.84
CPNE3-205ENST00000522240 TGP01266 2768 aa9.8□□□□□ -0.84
CPNE3-205ENST00000522240 M0R3E3 92 aa9.79□□□□□ -0.84
CPNE3-205ENST00000522240 TCRAP04437 139 aa9.79□□□□□ -0.84
CPNE3-205ENST00000522240 AKR1C3P42330 323 aa9.79□□□□□ -0.84
CPNE3-205ENST00000522240 SNRPD3P62318 126 aaKnown RBP9.79□□□□□ -0.84
CPNE3-205ENST00000522240 GNG5P63218 68 aa9.79□□□□□ -0.84
CPNE3-205ENST00000522240 GBGT1Q8N5D6 347 aa9.79□□□□□ -0.84
CPNE3-205ENST00000522240 GPR61Q9BZJ8 451 aa9.79□□□□□ -0.84
CPNE3-205ENST00000522240 SELENOKQ9Y6D0 94 aa9.79□□□□□ -0.84
CPNE3-205ENST00000522240 RBAKDNA6NC62 111 aa9.78□□□□□ -0.84
CPNE3-205ENST00000522240 FBLL1A6NHQ2 334 aaKnown RBP9.78□□□□□ -0.84
CPNE3-205ENST00000522240 KRBOX1C9JBD0 128 aa9.78□□□□□ -0.84
CPNE3-205ENST00000522240 DIRC3C9JPN6 131 aa9.78□□□□□ -0.84
CPNE3-205ENST00000522240 K7EQM0 130 aa9.78□□□□□ -0.84
CPNE3-205ENST00000522240 HLA-DMBP28068 263 aa9.78□□□□□ -0.84
CPNE3-205ENST00000522240 CNN1P51911 297 aaKnown RBP9.78□□□□□ -0.84
CPNE3-205ENST00000522240 FAM74A3Q4VXF1 159 aa9.78□□□□□ -0.84
CPNE3-205ENST00000522240 RNF182Q8N6D2 247 aa9.78□□□□□ -0.84
CPNE3-205ENST00000522240 PARLQ9H300 379 aa9.78□□□□□ -0.84
CPNE3-205ENST00000522240 RPH3ALQ9UNE2 315 aa9.78□□□□□ -0.84
CPNE3-205ENST00000522240 TRBV6-1A0A0K0K1D8 114 aa9.77□□□□□ -0.85
CPNE3-205ENST00000522240 S100A9P06702 114 aaKnown RBP9.77□□□□□ -0.85
CPNE3-205ENST00000522240 TFPI2P48307 235 aa9.77□□□□□ -0.85
CPNE3-205ENST00000522240 SOHLH1Q5JUK2 328 aa9.77□□□□□ -0.85
CPNE3-205ENST00000522240 IGFL4Q6B9Z1 124 aa9.77□□□□□ -0.85
CPNE3-205ENST00000522240 GOLT1AQ6ZVE7 132 aa9.77□□□□□ -0.85
CPNE3-205ENST00000522240 WFDC3Q8IUB2 231 aa9.77□□□□□ -0.85
CPNE3-205ENST00000522240 TMEM75Q8N9X5 138 aa9.77□□□□□ -0.85
CPNE3-205ENST00000522240 ZNF738Q8NE65 137 aa9.77□□□□□ -0.85
CPNE3-205ENST00000522240 FMC1Q96HJ9 113 aa9.77□□□□□ -0.85
CPNE3-205ENST00000522240 C20orf173Q96LM9 149 aa9.77□□□□□ -0.85
CPNE3-205ENST00000522240 SEC11CQ9BY50 192 aa9.77□□□□□ -0.85
CPNE3-205ENST00000522240 ZNF256Q9Y2P7 627 aaPredicted RBP9.77□□□□□ -0.85
CPNE3-205ENST00000522240 KLF12Q9Y4X4 402 aa9.77□□□□□ -0.85
CPNE3-205ENST00000522240 IZUMO1RA6ND01 250 aa9.76□□□□□ -0.85
CPNE3-205ENST00000522240 C9JCJ5 164 aa9.76□□□□□ -0.85
CPNE3-205ENST00000522240 ATP6V1G1O75348 118 aa9.76□□□□□ -0.85
CPNE3-205ENST00000522240 ZNF688P0C7X2 276 aa9.76□□□□□ -0.85
CPNE3-205ENST00000522240 ADCYAP1P18509 176 aa9.76□□□□□ -0.85
CPNE3-205ENST00000522240 CEBPGP53567 150 aa9.76□□□□□ -0.85
CPNE3-205ENST00000522240 TAS2R60P59551 318 aa9.76□□□□□ -0.85
CPNE3-205ENST00000522240 C10orf91Q5T1B1 145 aa9.76□□□□□ -0.85
CPNE3-205ENST00000522240 FAM24BQ8N5W8 94 aa9.76□□□□□ -0.85
CPNE3-205ENST00000522240 SMIM7Q9BQ49 75 aa9.76□□□□□ -0.85
CPNE3-205ENST00000522240 CARHSP1Q9Y2V2 147 aaKnown RBP9.76□□□□□ -0.85
CPNE3-205ENST00000522240 IGKV2-40A0A087WW87 121 aaPredicted RBP9.75□□□□□ -0.85
CPNE3-205ENST00000522240 ZNF727A8MUV8 499 aa9.75□□□□□ -0.85
CPNE3-205ENST00000522240 ZNF705FA8MVS1 300 aaPredicted RBP9.75□□□□□ -0.85
CPNE3-205ENST00000522240 F8W036 122 aa9.75□□□□□ -0.85
CPNE3-205ENST00000522240 IGKV2D-40P01614 121 aaPredicted RBP9.75□□□□□ -0.85
CPNE3-205ENST00000522240 RPL35P42766 123 aaKnown RBP9.75□□□□□ -0.85
CPNE3-205ENST00000522240 CMC4P56277 68 aaPredicted RBP9.75□□□□□ -0.85
CPNE3-205ENST00000522240 UBE2G1P62253 170 aa9.75□□□□□ -0.85
CPNE3-205ENST00000522240 GUCA2BQ16661 112 aa9.75□□□□□ -0.85
CPNE3-205ENST00000522240 TMEM183BQ1AE95 376 aa9.75□□□□□ -0.85
CPNE3-205ENST00000522240 PSMG4Q5JS54 123 aa9.75□□□□□ -0.85
CPNE3-205ENST00000522240 PRR31Q5SQ13 230 aa9.75□□□□□ -0.85
CPNE3-205ENST00000522240 Q86TA4 180 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms