RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 RAB19A4D1S5 217 aa9.99□□□□□ -0.81
CLK4-210ENST00000522136 OR4C46A6NHA9 309 aa9.99□□□□□ -0.81
CLK4-210ENST00000522136 ID1P41134 155 aa9.99□□□□□ -0.81
CLK4-210ENST00000522136 ZNF738Q8NE65 137 aa9.99□□□□□ -0.81
CLK4-210ENST00000522136 CMTM2Q8TAZ6 248 aa9.99□□□□□ -0.81
CLK4-210ENST00000522136 EPDR1Q9UM22 224 aa9.99□□□□□ -0.81
CLK4-210ENST00000522136 TRAV2A0A0B4J234 112 aa9.98□□□□□ -0.81
CLK4-210ENST00000522136 ZNF705DP0CH99 300 aaPredicted RBP9.98□□□□□ -0.81
CLK4-210ENST00000522136 ZNF705BP0CI00 300 aaPredicted RBP9.98□□□□□ -0.81
CLK4-210ENST00000522136 C5orf17Q8NAS9 161 aa9.98□□□□□ -0.81
CLK4-210ENST00000522136 NKX6-2Q9C056 277 aaPredicted RBP9.98□□□□□ -0.81
CLK4-210ENST00000522136 TREM1Q9NP99 234 aa9.98□□□□□ -0.81
CLK4-210ENST00000522136 IGKV2-40A0A087WW87 121 aaPredicted RBP9.97□□□□□ -0.81
CLK4-210ENST00000522136 F6UB75 175 aa9.97□□□□□ -0.81
CLK4-210ENST00000522136 IGKV2D-40P01614 121 aaPredicted RBP9.97□□□□□ -0.81
CLK4-210ENST00000522136 CD7P09564 240 aa9.97□□□□□ -0.81
CLK4-210ENST00000522136 TAGLN2P37802 199 aaKnown RBP9.97□□□□□ -0.81
CLK4-210ENST00000522136 DEFB131AP59861 70 aa9.97□□□□□ -0.81
CLK4-210ENST00000522136 SNRPD3P62318 126 aaKnown RBP9.97□□□□□ -0.81
CLK4-210ENST00000522136 PEA15Q15121 130 aa9.97□□□□□ -0.81
CLK4-210ENST00000522136 ZNF124Q15973 351 aa9.97□□□□□ -0.81
CLK4-210ENST00000522136 BEAN1Q3B7T3 259 aa9.97□□□□□ -0.81
CLK4-210ENST00000522136 RPUSD4Q96CM3 377 aaKnown RBP9.97□□□□□ -0.81
CLK4-210ENST00000522136 LINC00479Q96M42 142 aa9.97□□□□□ -0.81
CLK4-210ENST00000522136 PKD1L1Q8TDX9 2849 aa9.97□□□□□ -0.81
CLK4-210ENST00000522136 DIRC3C9JPN6 131 aa9.97□□□□□ -0.81
CLK4-210ENST00000522136 WIPF1O43516 503 aa9.97□□□□□ -0.81
CLK4-210ENST00000522136 SRP19P09132 144 aaKnown RBP9.97□□□□□ -0.81
CLK4-210ENST00000522136 CEBPGP53567 150 aa9.97□□□□□ -0.81
CLK4-210ENST00000522136 SAMD13Q5VXD3 122 aa9.97□□□□□ -0.81
CLK4-210ENST00000522136 GOLT1AQ6ZVE7 132 aa9.97□□□□□ -0.81
CLK4-210ENST00000522136 SGK494Q96LW2 274 aa9.97□□□□□ -0.81
CLK4-210ENST00000522136 MAP6D1Q9H9H5 199 aa9.97□□□□□ -0.81
CLK4-210ENST00000522136 PRELID1Q9Y255 219 aa9.97□□□□□ -0.81
CLK4-210ENST00000522136 TRAV34A0A0B4J273 112 aa9.96□□□□□ -0.81
CLK4-210ENST00000522136 G3V4G9 280 aa9.96□□□□□ -0.81
CLK4-210ENST00000522136 PEX7O00628 323 aa9.96□□□□□ -0.81
CLK4-210ENST00000522136 TCRAP04437 139 aa9.96□□□□□ -0.81
CLK4-210ENST00000522136 CSN1S1P47710 185 aa9.96□□□□□ -0.81
CLK4-210ENST00000522136 ODF3L2Q3SX64 289 aa9.96□□□□□ -0.81
CLK4-210ENST00000522136 GDF5OSQ5U4N7 250 aa9.96□□□□□ -0.81
CLK4-210ENST00000522136 APRG1Q8IVJ8 170 aa9.96□□□□□ -0.81
CLK4-210ENST00000522136 TXNDC17Q9BRA2 123 aa9.96□□□□□ -0.81
CLK4-210ENST00000522136 DERL1Q9BUN8 251 aa9.96□□□□□ -0.81
CLK4-210ENST00000522136 PDE6DO43924 150 aa9.95□□□□□ -0.82
CLK4-210ENST00000522136 ERCC8Q13216 396 aa9.95□□□□□ -0.82
CLK4-210ENST00000522136 CYB561D1Q8N8Q1 229 aa9.95□□□□□ -0.82
CLK4-210ENST00000522136 CITED4Q96RK1 184 aa9.95□□□□□ -0.82
CLK4-210ENST00000522136 WFDC10AQ9H1F0 79 aa9.95□□□□□ -0.82
CLK4-210ENST00000522136 CLEC5AQ9NY25 188 aa9.95□□□□□ -0.82
CLK4-210ENST00000522136 ANK2Q01484 3957 aa9.95□□□□□ -0.82
CLK4-210ENST00000522136 TRAV8-1A0A0A6YYK1 113 aa9.95□□□□□ -0.82
CLK4-210ENST00000522136 MRPL53Q96EL3 112 aaKnown RBP9.95□□□□□ -0.82
CLK4-210ENST00000522136 ASCL2Q99929 193 aa9.95□□□□□ -0.82
CLK4-210ENST00000522136 VGLL1Q99990 258 aa9.95□□□□□ -0.82
CLK4-210ENST00000522136 ATG101Q9BSB4 218 aa9.95□□□□□ -0.82
CLK4-210ENST00000522136 KNCNA6PVL3 124 aa9.94□□□□□ -0.82
CLK4-210ENST00000522136 F6UZH7 168 aa9.94□□□□□ -0.82
CLK4-210ENST00000522136 KRTAP10-11P60412 298 aa9.94□□□□□ -0.82
CLK4-210ENST00000522136 EIF4E3Q8N5X7 224 aaKnown RBP9.94□□□□□ -0.82
CLK4-210ENST00000522136 C2CD4CQ8TF44 421 aa9.94□□□□□ -0.82
CLK4-210ENST00000522136 HIST1H2BAQ96A08 127 aa9.94□□□□□ -0.82
CLK4-210ENST00000522136 C11orf52Q96A22 123 aa9.94□□□□□ -0.82
CLK4-210ENST00000522136 C19orf73Q9NVV2 129 aa9.94□□□□□ -0.82
CLK4-210ENST00000522136 OR8A1Q8NGG7 326 aa9.94□□□□□ -0.82
CLK4-210ENST00000522136 GPR61Q9BZJ8 451 aa9.94□□□□□ -0.82
CLK4-210ENST00000522136 SLC35B3Q9H1N7 401 aa9.94□□□□□ -0.82
CLK4-210ENST00000522136 OR11H12B2RN74 326 aa9.93□□□□□ -0.82
CLK4-210ENST00000522136 TMEM250H0YL14 139 aa9.93□□□□□ -0.82
CLK4-210ENST00000522136 AKR1C3P42330 323 aa9.93□□□□□ -0.82
CLK4-210ENST00000522136 HIST1H1AQ02539 215 aaPredicted RBP9.93□□□□□ -0.82
CLK4-210ENST00000522136 ZNF674Q2M3X9 581 aa9.93□□□□□ -0.82
CLK4-210ENST00000522136 ACTL10Q5JWF8 245 aa9.93□□□□□ -0.82
CLK4-210ENST00000522136 UQCC3Q6UW78 93 aa9.93□□□□□ -0.82
CLK4-210ENST00000522136 PRR25Q96S07 402 aa9.93□□□□□ -0.82
CLK4-210ENST00000522136 A0A0J9YX75 114 aa9.92□□□□□ -0.82
CLK4-210ENST00000522136 IGKV3-20P01619 116 aa9.92□□□□□ -0.82
CLK4-210ENST00000522136 IGLV2-11P01706 119 aa9.92□□□□□ -0.82
CLK4-210ENST00000522136 SFTA3P0C7M3 94 aa9.92□□□□□ -0.82
CLK4-210ENST00000522136 NDUFA5Q16718 116 aa9.92□□□□□ -0.82
CLK4-210ENST00000522136 SAMD5Q5TGI4 173 aa9.92□□□□□ -0.82
CLK4-210ENST00000522136 ARL6IP6Q8N6S5 226 aa9.92□□□□□ -0.82
CLK4-210ENST00000522136 TCEAL7Q9BRU2 100 aa9.92□□□□□ -0.82
CLK4-210ENST00000522136 AGPAT4-IT1Q9H0P7 198 aa9.92□□□□□ -0.82
CLK4-210ENST00000522136 PARLQ9H300 379 aa9.92□□□□□ -0.82
CLK4-210ENST00000522136 SMDT1Q9H4I9 107 aa9.92□□□□□ -0.82
CLK4-210ENST00000522136 RPL35P42766 123 aaKnown RBP9.92□□□□□ -0.82
CLK4-210ENST00000522136 CNN1P51911 297 aaKnown RBP9.92□□□□□ -0.82
CLK4-210ENST00000522136 OR10J6PQ8NGY7 276 aa9.92□□□□□ -0.82
CLK4-210ENST00000522136 Q8TAT8 98 aa9.92□□□□□ -0.82
CLK4-210ENST00000522136 SAV1Q9H4B6 383 aaPredicted RBP9.92□□□□□ -0.82
CLK4-210ENST00000522136 EGFEM1PQ0D2K5 195 aa9.91□□□□□ -0.82
CLK4-210ENST00000522136 EBLN2Q6P2I7 272 aa9.91□□□□□ -0.82
CLK4-210ENST00000522136 FOXI2Q6ZQN5 318 aa9.91□□□□□ -0.82
CLK4-210ENST00000522136 PRNTQ86SH4 94 aa9.91□□□□□ -0.82
CLK4-210ENST00000522136 GTSCR1Q86UQ5 136 aa9.91□□□□□ -0.82
CLK4-210ENST00000522136 DEFB125Q8N687 156 aa9.91□□□□□ -0.82
CLK4-210ENST00000522136 KLF12Q9Y4X4 402 aa9.91□□□□□ -0.82
CLK4-210ENST00000522136 CMYA5Q8N3K9 4069 aa9.91□□□□□ -0.82
CLK4-210ENST00000522136 TRBV20OR9-2A0A075B6H5 130 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms