RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 FOXI2Q6ZQN5 318 aa10.53□□□□□ -0.72
SDC2-203ENST00000519587 EXOC3-AS1Q8N2X6 119 aa10.53□□□□□ -0.72
SDC2-203ENST00000519587 C5orf17Q8NAS9 161 aa10.53□□□□□ -0.72
SDC2-203ENST00000519587 LYPD6BQ8NI32 183 aa10.53□□□□□ -0.72
SDC2-203ENST00000519587 RPUSD4Q96CM3 377 aaKnown RBP10.53□□□□□ -0.72
SDC2-203ENST00000519587 PGPA6NDG6 321 aa10.52□□□□□ -0.73
SDC2-203ENST00000519587 PAGE4O60829 102 aa10.52□□□□□ -0.73
SDC2-203ENST00000519587 SLC25A5P05141 298 aaKnown RBP10.52□□□□□ -0.73
SDC2-203ENST00000519587 IFITM2Q01629 132 aa10.52□□□□□ -0.73
SDC2-203ENST00000519587 IGFL4Q6B9Z1 124 aa10.52□□□□□ -0.73
SDC2-203ENST00000519587 ARL6IP6Q8N6S5 226 aa10.52□□□□□ -0.73
SDC2-203ENST00000519587 OR10J6PQ8NGY7 276 aa10.52□□□□□ -0.73
SDC2-203ENST00000519587 C20orf173Q96LM9 149 aa10.52□□□□□ -0.73
SDC2-203ENST00000519587 TXNDC17Q9BRA2 123 aa10.52□□□□□ -0.73
SDC2-203ENST00000519587 YTHDF2Q9Y5A9 579 aaKnown RBP10.52□□□□□ -0.73
SDC2-203ENST00000519587 SERTM2A0A1B0GWG4 89 aa10.51□□□□□ -0.73
SDC2-203ENST00000519587 GGTLC3B5MD39 225 aa10.51□□□□□ -0.73
SDC2-203ENST00000519587 K7EQM0 130 aa10.51□□□□□ -0.73
SDC2-203ENST00000519587 BCL2P10415 239 aa10.51□□□□□ -0.73
SDC2-203ENST00000519587 HLA-DMBP28068 263 aa10.51□□□□□ -0.73
SDC2-203ENST00000519587 SUMO1P63165 101 aaKnown RBP10.51□□□□□ -0.73
SDC2-203ENST00000519587 CCL20P78556 96 aa10.51□□□□□ -0.73
SDC2-203ENST00000519587 C11orf94C9JXX5 98 aa10.5□□□□□ -0.73
SDC2-203ENST00000519587 F6UZH7 168 aa10.5□□□□□ -0.73
SDC2-203ENST00000519587 M0R3E3 92 aa10.5□□□□□ -0.73
SDC2-203ENST00000519587 RGS13O14921 159 aa10.5□□□□□ -0.73
SDC2-203ENST00000519587 DUSP14O95147 198 aaKnown RBP10.5□□□□□ -0.73
SDC2-203ENST00000519587 CLLU1Q5K131 121 aa10.5□□□□□ -0.73
SDC2-203ENST00000519587 APRG1Q8IVJ8 170 aa10.5□□□□□ -0.73
SDC2-203ENST00000519587 STHQ8IWL8 128 aa10.5□□□□□ -0.73
SDC2-203ENST00000519587 SAV1Q9H4B6 383 aaPredicted RBP10.5□□□□□ -0.73
SDC2-203ENST00000519587 TUBA4BQ9H853 241 aa10.5□□□□□ -0.73
SDC2-203ENST00000519587 VAX2Q9UIW0 290 aa10.5□□□□□ -0.73
SDC2-203ENST00000519587 RPH3ALQ9UNE2 315 aa10.5□□□□□ -0.73
SDC2-203ENST00000519587 A0A0J9YX75 114 aa10.49□□□□□ -0.73
SDC2-203ENST00000519587 HLA-DRB4P13762 266 aa10.49□□□□□ -0.73
SDC2-203ENST00000519587 MEF2BQ02080 365 aaPredicted RBP10.49□□□□□ -0.73
SDC2-203ENST00000519587 HIST1H1AQ02539 215 aaPredicted RBP10.49□□□□□ -0.73
SDC2-203ENST00000519587 HAGHQ16775 308 aa10.49□□□□□ -0.73
SDC2-203ENST00000519587 ACTL10Q5JWF8 245 aa10.49□□□□□ -0.73
SDC2-203ENST00000519587 Q8N1Y9 231 aa10.49□□□□□ -0.73
SDC2-203ENST00000519587 OR8A1Q8NGG7 326 aa10.49□□□□□ -0.73
SDC2-203ENST00000519587 PCNPQ8WW12 178 aaKnown RBP10.49□□□□□ -0.73
SDC2-203ENST00000519587 HIST1H2BAQ96A08 127 aa10.49□□□□□ -0.73
SDC2-203ENST00000519587 ATG101Q9BSB4 218 aa10.49□□□□□ -0.73
SDC2-203ENST00000519587 SRD5A3Q9H8P0 318 aa10.49□□□□□ -0.73
SDC2-203ENST00000519587 C19orf73Q9NVV2 129 aa10.49□□□□□ -0.73
SDC2-203ENST00000519587 HLA-DRB4X5D2U9 266 aa10.49□□□□□ -0.73
SDC2-203ENST00000519587 RBAKDNA6NC62 111 aa10.48□□□□□ -0.73
SDC2-203ENST00000519587 FBLL1A6NHQ2 334 aaKnown RBP10.48□□□□□ -0.73
SDC2-203ENST00000519587 KNCNA6PVL3 124 aa10.48□□□□□ -0.73
SDC2-203ENST00000519587 ZNF705FA8MVS1 300 aaPredicted RBP10.48□□□□□ -0.73
SDC2-203ENST00000519587 PDE6DO43924 150 aa10.48□□□□□ -0.73
SDC2-203ENST00000519587 ATP5G3P48201 142 aa10.48□□□□□ -0.73
SDC2-203ENST00000519587 DEFB125Q8N687 156 aa10.48□□□□□ -0.73
SDC2-203ENST00000519587 CYB561D1Q8N8Q1 229 aa10.48□□□□□ -0.73
SDC2-203ENST00000519587 WFDC10AQ9H1F0 79 aa10.48□□□□□ -0.73
SDC2-203ENST00000519587 AURKAIP1Q9NWT8 199 aaPredicted RBP10.48□□□□□ -0.73
SDC2-203ENST00000519587 PPP1R14DQ9NXH3 145 aa10.48□□□□□ -0.73
SDC2-203ENST00000519587 EPDR1Q9UM22 224 aa10.48□□□□□ -0.73
SDC2-203ENST00000519587 IGKV2-40A0A087WW87 121 aaPredicted RBP10.47□□□□□ -0.73
SDC2-203ENST00000519587 LOC102723971A0A1B0GUV8 181 aa10.47□□□□□ -0.73
SDC2-203ENST00000519587 RBFOX3A6NFN3 312 aa10.47□□□□□ -0.73
SDC2-203ENST00000519587 DIRC3C9JPN6 131 aa10.47□□□□□ -0.73
SDC2-203ENST00000519587 PEX7O00628 323 aa10.47□□□□□ -0.73
SDC2-203ENST00000519587 IGKV2D-40P01614 121 aaPredicted RBP10.47□□□□□ -0.73
SDC2-203ENST00000519587 TCRAP04437 139 aa10.47□□□□□ -0.73
SDC2-203ENST00000519587 GNG5P63218 68 aa10.47□□□□□ -0.73
SDC2-203ENST00000519587 TOR2AQ5JU69 321 aa10.47□□□□□ -0.73
SDC2-203ENST00000519587 TMEM78Q5T7P6 136 aa10.47□□□□□ -0.73
SDC2-203ENST00000519587 GOLT1AQ6ZVE7 132 aa10.47□□□□□ -0.73
SDC2-203ENST00000519587 FAM210AQ96ND0 272 aa10.47□□□□□ -0.73
SDC2-203ENST00000519587 CLUHP3Q96NS8 147 aa10.47□□□□□ -0.73
SDC2-203ENST00000519587 EIF5A2Q9GZV4 153 aaKnown RBP10.47□□□□□ -0.73
SDC2-203ENST00000519587 PRAC2D3DTV9 90 aa10.46□□□□□ -0.73
SDC2-203ENST00000519587 NPIPB6E9PJ23 425 aa10.46□□□□□ -0.73
SDC2-203ENST00000519587 F6UB75 175 aa10.46□□□□□ -0.73
SDC2-203ENST00000519587 H3BMM0 161 aa10.46□□□□□ -0.73
SDC2-203ENST00000519587 IGHV4-30-4P0DP06 118 aa10.46□□□□□ -0.73
SDC2-203ENST00000519587 CNN1P51911 297 aaKnown RBP10.46□□□□□ -0.73
SDC2-203ENST00000519587 NUTF2P61970 127 aaKnown RBP10.46□□□□□ -0.73
SDC2-203ENST00000519587 ZNF124Q15973 351 aa10.46□□□□□ -0.73
SDC2-203ENST00000519587 ZNF506Q5JVG8 444 aa10.46□□□□□ -0.73
SDC2-203ENST00000519587 CCDC28AQ8IWP9 274 aa10.46□□□□□ -0.73
SDC2-203ENST00000519587 OR4B1Q8NGF8 309 aa10.46□□□□□ -0.73
SDC2-203ENST00000519587 LOC102724200A0A096LPH7 203 aaPredicted RBP10.45□□□□□ -0.74
SDC2-203ENST00000519587 A8MZ25 164 aa10.45□□□□□ -0.74
SDC2-203ENST00000519587 AKR1C3P42330 323 aa10.45□□□□□ -0.74
SDC2-203ENST00000519587 APOC4P55056 127 aa10.45□□□□□ -0.74
SDC2-203ENST00000519587 GDF5OSQ5U4N7 250 aa10.45□□□□□ -0.74
SDC2-203ENST00000519587 MORN3Q6PF18 240 aaPredicted RBP10.45□□□□□ -0.74
SDC2-203ENST00000519587 C9orf47Q6ZRZ4 202 aa10.45□□□□□ -0.74
SDC2-203ENST00000519587 TRPT1Q86TN4 253 aaKnown RBP10.45□□□□□ -0.74
SDC2-203ENST00000519587 LINC00477Q96M19 166 aa10.45□□□□□ -0.74
SDC2-203ENST00000519587 ODF3Q96PU9 254 aa10.45□□□□□ -0.74
SDC2-203ENST00000519587 NDFIP1Q9BT67 221 aa10.45□□□□□ -0.74
SDC2-203ENST00000519587 AGRNO00468 2067 aa10.45□□□□□ -0.74
SDC2-203ENST00000519587 NDUFS6O75380 124 aaKnown RBP10.44□□□□□ -0.74
SDC2-203ENST00000519587 PRB2P02812 416 aaPredicted RBP10.44□□□□□ -0.74
SDC2-203ENST00000519587 S100A9P06702 114 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms