RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 SMIM12Q96EX1 92 aa11.07□□□□□ -0.64
CLN8-204ENST00000519254 IGHV3OR16-13A0A075B7E8 117 aa11.06□□□□□ -0.64
CLN8-204ENST00000519254 IGHV3-49A0A0A0MS15 119 aa11.06□□□□□ -0.64
CLN8-204ENST00000519254 IGHV3-74A0A0B4J1X5 117 aa11.06□□□□□ -0.64
CLN8-204ENST00000519254 IGHV3-66A0A0C4DH42 116 aa11.06□□□□□ -0.64
CLN8-204ENST00000519254 TRBV6-1A0A0K0K1D8 114 aa11.06□□□□□ -0.64
CLN8-204ENST00000519254 DIRC3C9JPN6 131 aa11.06□□□□□ -0.64
CLN8-204ENST00000519254 NDUFA4O00483 81 aa11.06□□□□□ -0.64
CLN8-204ENST00000519254 PRB4P10163 310 aaPredicted RBP11.06□□□□□ -0.64
CLN8-204ENST00000519254 DEFB136Q30KP8 78 aa11.06□□□□□ -0.64
CLN8-204ENST00000519254 IBA57Q5T440 356 aaKnown RBP11.06□□□□□ -0.64
CLN8-204ENST00000519254 UNQ9165/PRO28630Q6UXU0 137 aa11.06□□□□□ -0.64
CLN8-204ENST00000519254 Q86TA4 180 aa11.06□□□□□ -0.64
CLN8-204ENST00000519254 KLHL30-AS1Q8NEE0 82 aa11.06□□□□□ -0.64
CLN8-204ENST00000519254 AAMDCQ9H7C9 122 aa11.06□□□□□ -0.64
CLN8-204ENST00000519254 A0A087X0K7 114 aa11.05□□□□□ -0.64
CLN8-204ENST00000519254 ZNF320A2RRD8 509 aa11.05□□□□□ -0.64
CLN8-204ENST00000519254 ZNF253O75346 499 aa11.05□□□□□ -0.64
CLN8-204ENST00000519254 FAM231DQ6ZW35 169 aa11.05□□□□□ -0.64
CLN8-204ENST00000519254 CITED2Q99967 270 aaPredicted RBP11.05□□□□□ -0.64
CLN8-204ENST00000519254 BIN3Q9NQY0 253 aa11.05□□□□□ -0.64
CLN8-204ENST00000519254 CDX1P47902 265 aaPredicted RBP11.05□□□□□ -0.64
CLN8-204ENST00000519254 RPEL1Q2QD12 228 aa11.05□□□□□ -0.64
CLN8-204ENST00000519254 FAM209BQ5JX69 171 aa11.05□□□□□ -0.64
CLN8-204ENST00000519254 TMEM75Q8N9X5 138 aa11.05□□□□□ -0.64
CLN8-204ENST00000519254 NUDT10Q8NFP7 164 aa11.05□□□□□ -0.64
CLN8-204ENST00000519254 NUDT11Q96G61 164 aa11.05□□□□□ -0.64
CLN8-204ENST00000519254 ZNF331Q9NQX6 463 aaPredicted RBP11.05□□□□□ -0.64
CLN8-204ENST00000519254 IGHV4OR15-8A0A075B7B6 117 aa11.04□□□□□ -0.64
CLN8-204ENST00000519254 A0A087WW49 117 aa11.04□□□□□ -0.64
CLN8-204ENST00000519254 ZNF785A8K8V0 405 aa11.04□□□□□ -0.64
CLN8-204ENST00000519254 IGFL4Q6B9Z1 124 aa11.04□□□□□ -0.64
CLN8-204ENST00000519254 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.04□□□□□ -0.64
CLN8-204ENST00000519254 LINC00322Q6ZN03 302 aaPredicted RBP11.04□□□□□ -0.64
CLN8-204ENST00000519254 PRNTQ86SH4 94 aa11.04□□□□□ -0.64
CLN8-204ENST00000519254 TMEM183AQ8IXX5 376 aa11.04□□□□□ -0.64
CLN8-204ENST00000519254 C4orf3Q8WVX3 66 aa11.04□□□□□ -0.64
CLN8-204ENST00000519254 FRZBQ92765 325 aa11.04□□□□□ -0.64
CLN8-204ENST00000519254 SAV1Q9H4B6 383 aaPredicted RBP11.04□□□□□ -0.64
CLN8-204ENST00000519254 TRAV9-1A0A075B6T8 112 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 ZNF705GA8MUZ8 300 aaPredicted RBP11.03□□□□□ -0.64
CLN8-204ENST00000519254 SNRPEP62304 92 aaKnown RBP11.03□□□□□ -0.64
CLN8-204ENST00000519254 PSG3Q16557 428 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 PRR27Q6MZM9 219 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 C16orf54Q6UWD8 224 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 C8orf86Q6ZUL3 223 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 ARL6IP6Q8N6S5 226 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 BTF3L4Q96K17 158 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 DUX3Q96PT4 197 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 C2CD3Q4AC94 2353 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 C5orf52A6NGY3 159 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 K7EQM0 130 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 HIST1H2BKO60814 126 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 HIST1H2BJP06899 126 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 HIST1H2BOP23527 126 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 HLA-DMBP28068 263 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 HIST1H2BBP33778 126 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 HIST1H2BDP58876 126 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 HIST1H2BCP62807 126 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 HIST2H2BEQ16778 126 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.03□□□□□ -0.64
CLN8-204ENST00000519254 GLMPQ8WWB7 406 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 HIST1H2BHQ93079 126 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 HIST1H2BNQ99877 126 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 HIST1H2BMQ99879 126 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 PSG8Q9UQ74 426 aa11.03□□□□□ -0.64
CLN8-204ENST00000519254 TSSC4Q9Y5U2 329 aaPredicted RBP11.03□□□□□ -0.64
CLN8-204ENST00000519254 NIPBLQ6KC79 2804 aaeCLIP11.03□□□□□ -0.64
CLN8-204ENST00000519254 A0A1B0GUS0 222 aa11.02□□□□□ -0.65
CLN8-204ENST00000519254 SMIM27A0A1W2PRY6 76 aa11.02□□□□□ -0.65
CLN8-204ENST00000519254 C19orf71A6NCJ1 209 aa11.02□□□□□ -0.65
CLN8-204ENST00000519254 GATCO43716 136 aaKnown RBP11.02□□□□□ -0.65
CLN8-204ENST00000519254 CA1P00915 261 aaPredicted RBP11.02□□□□□ -0.65
CLN8-204ENST00000519254 S100A6P06703 90 aa11.02□□□□□ -0.65
CLN8-204ENST00000519254 CSN1S1P47710 185 aa11.02□□□□□ -0.65
CLN8-204ENST00000519254 KRTAP10-3P60369 221 aa11.02□□□□□ -0.65
CLN8-204ENST00000519254 PRIMA1Q86XR5 153 aa11.02□□□□□ -0.65
CLN8-204ENST00000519254 ZNF492Q9P255 531 aa11.02□□□□□ -0.65
CLN8-204ENST00000519254 JMJD1CQ15652 2540 aa11.01□□□□□ -0.65
CLN8-204ENST00000519254 ZNF705FA8MVS1 300 aaPredicted RBP11.01□□□□□ -0.65
CLN8-204ENST00000519254 CHEK1O14757 476 aa11.01□□□□□ -0.65
CLN8-204ENST00000519254 TRGC1P0CF51 173 aa11.01□□□□□ -0.65
CLN8-204ENST00000519254 HOXD3P31249 432 aaPredicted RBP11.01□□□□□ -0.65
CLN8-204ENST00000519254 OR11H1Q8NG94 326 aa11.01□□□□□ -0.65
CLN8-204ENST00000519254 ASCL2Q99929 193 aa11.01□□□□□ -0.65
CLN8-204ENST00000519254 ZFP30Q9Y2G7 519 aa11.01□□□□□ -0.65
CLN8-204ENST00000519254 IGKV2-40A0A087WW87 121 aaPredicted RBP11□□□□□ -0.65
CLN8-204ENST00000519254 SERTM2A0A1B0GWG4 89 aa11□□□□□ -0.65
CLN8-204ENST00000519254 IGKV2D-40P01614 121 aaPredicted RBP11□□□□□ -0.65
CLN8-204ENST00000519254 NSUN5P1Q3KNT7 163 aa11□□□□□ -0.65
CLN8-204ENST00000519254 KRTAP24-1Q3LI83 254 aa11□□□□□ -0.65
CLN8-204ENST00000519254 FAM106AQ4KMX7 169 aa11□□□□□ -0.65
CLN8-204ENST00000519254 ACTL10Q5JWF8 245 aa11□□□□□ -0.65
CLN8-204ENST00000519254 WFDC12Q8WWY7 111 aa11□□□□□ -0.65
CLN8-204ENST00000519254 DPF1Q92782 380 aa11□□□□□ -0.65
CLN8-204ENST00000519254 GRAMD2BQ96HH9 432 aa11□□□□□ -0.65
CLN8-204ENST00000519254 TRAV8-2A0A0B4J237 113 aa11□□□□□ -0.65
CLN8-204ENST00000519254 LINC01619G3V211 115 aa11□□□□□ -0.65
CLN8-204ENST00000519254 FRMD6-AS1P0C7T7 363 aa11□□□□□ -0.65
CLN8-204ENST00000519254 SLURP1P55000 103 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms