RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 GAGE7O76087 117 aa10.15□□□□□ -0.78
SCARNA20.5-201ENST00000516991 MBPP02686 304 aaPredicted RBP10.15□□□□□ -0.78
SCARNA20.5-201ENST00000516991 GAGE12FP0CL80 117 aa10.15□□□□□ -0.78
SCARNA20.5-201ENST00000516991 GAGE12GP0CL81 117 aa10.15□□□□□ -0.78
SCARNA20.5-201ENST00000516991 GAGE12IP0CL82 117 aa10.15□□□□□ -0.78
SCARNA20.5-201ENST00000516991 BTF3P20290 206 aaKnown RBP10.15□□□□□ -0.78
SCARNA20.5-201ENST00000516991 BTCP35070 178 aa10.15□□□□□ -0.78
SCARNA20.5-201ENST00000516991 ARL16Q0P5N6 197 aa10.15□□□□□ -0.78
SCARNA20.5-201ENST00000516991 ZNF846Q147U1 533 aa10.15□□□□□ -0.78
SCARNA20.5-201ENST00000516991 Q6ZRG5 221 aa10.15□□□□□ -0.78
SCARNA20.5-201ENST00000516991 OR1L4Q8NGR5 311 aa10.15□□□□□ -0.78
SCARNA20.5-201ENST00000516991 TMEM37Q8WXS4 190 aa10.15□□□□□ -0.78
SCARNA20.5-201ENST00000516991 PFDN5Q99471 154 aa10.15□□□□□ -0.78
SCARNA20.5-201ENST00000516991 PYGO2Q9BRQ0 406 aa10.15□□□□□ -0.78
SCARNA20.5-201ENST00000516991 KRTAP4-5Q9BYR2 181 aa10.15□□□□□ -0.78
SCARNA20.5-201ENST00000516991 RBM38Q9H0Z9 239 aaKnown RBP10.15□□□□□ -0.78
SCARNA20.5-201ENST00000516991 ABCA13Q86UQ4 5058 aa10.14□□□□□ -0.79
SCARNA20.5-201ENST00000516991 HSPG2P98160 4391 aa10.14□□□□□ -0.79
SCARNA20.5-201ENST00000516991 LINC00854A0A1B0GVQ3 168 aa10.14□□□□□ -0.79
SCARNA20.5-201ENST00000516991 PRAC2D3DTV9 90 aa10.14□□□□□ -0.79
SCARNA20.5-201ENST00000516991 NPIPB6E9PJ23 425 aa10.14□□□□□ -0.79
SCARNA20.5-201ENST00000516991 ZNF253O75346 499 aa10.14□□□□□ -0.79
SCARNA20.5-201ENST00000516991 PRB4P10163 310 aaPredicted RBP10.14□□□□□ -0.79
SCARNA20.5-201ENST00000516991 CAMLGP49069 296 aa10.14□□□□□ -0.79
SCARNA20.5-201ENST00000516991 DAZ2Q13117 558 aaKnown RBP10.14□□□□□ -0.79
SCARNA20.5-201ENST00000516991 KIR3DS1Q14943 382 aa10.14□□□□□ -0.79
SCARNA20.5-201ENST00000516991 MORN5Q5VZ52 161 aa10.14□□□□□ -0.79
SCARNA20.5-201ENST00000516991 MAPKAPK5-AS1Q8N8E1 139 aa10.14□□□□□ -0.79
SCARNA20.5-201ENST00000516991 MRPL53Q96EL3 112 aaKnown RBP10.14□□□□□ -0.79
SCARNA20.5-201ENST00000516991 SAT2Q96F10 170 aaPredicted RBP10.14□□□□□ -0.79
SCARNA20.5-201ENST00000516991 PARD6GQ9BYG4 376 aaPredicted RBP10.14□□□□□ -0.79
SCARNA20.5-201ENST00000516991 DNAJC4Q9NNZ3 241 aa10.14□□□□□ -0.79
SCARNA20.5-201ENST00000516991 MRPS16Q9Y3D3 137 aaKnown RBP10.14□□□□□ -0.79
SCARNA20.5-201ENST00000516991 A0A0J9YY99 117 aa10.13□□□□□ -0.79
SCARNA20.5-201ENST00000516991 H3BQ15 152 aa10.13□□□□□ -0.79
SCARNA20.5-201ENST00000516991 H3BTX0 84 aa10.13□□□□□ -0.79
SCARNA20.5-201ENST00000516991 SNRPCP09234 159 aaKnown RBP10.13□□□□□ -0.79
SCARNA20.5-201ENST00000516991 ZNF680Q8NEM1 530 aa10.13□□□□□ -0.79
SCARNA20.5-201ENST00000516991 UQCC1Q9NVA1 299 aa10.13□□□□□ -0.79
SCARNA20.5-201ENST00000516991 TRAV12-3A0A0B4J271 114 aa10.12□□□□□ -0.79
SCARNA20.5-201ENST00000516991 J3KRW8 73 aa10.12□□□□□ -0.79
SCARNA20.5-201ENST00000516991 CT45A10P0DMU9 189 aa10.12□□□□□ -0.79
SCARNA20.5-201ENST00000516991 HOXA5P20719 270 aa10.12□□□□□ -0.79
SCARNA20.5-201ENST00000516991 BCAP31P51572 246 aa10.12□□□□□ -0.79
SCARNA20.5-201ENST00000516991 SPATA12Q7Z6I5 190 aa10.12□□□□□ -0.79
SCARNA20.5-201ENST00000516991 NRARPQ7Z6K4 114 aa10.12□□□□□ -0.79
SCARNA20.5-201ENST00000516991 C12orf45Q8N5I9 185 aaPredicted RBP10.12□□□□□ -0.79
SCARNA20.5-201ENST00000516991 C20orf85Q9H1P6 137 aa10.12□□□□□ -0.79
SCARNA20.5-201ENST00000516991 WDR83OSQ9Y284 106 aa10.12□□□□□ -0.79
SCARNA20.5-201ENST00000516991 LSM5Q9Y4Y9 91 aaKnown RBP10.12□□□□□ -0.79
SCARNA20.5-201ENST00000516991 C7orf71A4D174 169 aa10.11□□□□□ -0.79
SCARNA20.5-201ENST00000516991 CCSO14618 274 aa10.11□□□□□ -0.79
SCARNA20.5-201ENST00000516991 SLC25A5P05141 298 aaKnown RBP10.11□□□□□ -0.79
SCARNA20.5-201ENST00000516991 IL7P13232 177 aa10.11□□□□□ -0.79
SCARNA20.5-201ENST00000516991 PVALBP20472 110 aaPredicted RBP10.11□□□□□ -0.79
SCARNA20.5-201ENST00000516991 CAV2P51636 162 aa10.11□□□□□ -0.79
SCARNA20.5-201ENST00000516991 MIC13Q5XKP0 118 aa10.11□□□□□ -0.79
SCARNA20.5-201ENST00000516991 C18orf15Q96N68 181 aa10.11□□□□□ -0.79
SCARNA20.5-201ENST00000516991 SDHCQ99643 169 aaPredicted RBP10.11□□□□□ -0.79
SCARNA20.5-201ENST00000516991 KRTAP1-5Q9BYS1 174 aa10.11□□□□□ -0.79
SCARNA20.5-201ENST00000516991 TMPRSS5Q9H3S3 457 aa10.11□□□□□ -0.79
SCARNA20.5-201ENST00000516991 PRELID1Q9Y255 219 aa10.11□□□□□ -0.79
SCARNA20.5-201ENST00000516991 CST7O76096 145 aa10.1□□□□□ -0.79
SCARNA20.5-201ENST00000516991 RPL29P47914 159 aaKnown RBP10.1□□□□□ -0.79
SCARNA20.5-201ENST00000516991 ESRGQ1W209 222 aa10.1□□□□□ -0.79
SCARNA20.5-201ENST00000516991 VWC2Q2TAL6 325 aa10.1□□□□□ -0.79
SCARNA20.5-201ENST00000516991 Q6ZTI0 123 aa10.1□□□□□ -0.79
SCARNA20.5-201ENST00000516991 ZNF431Q8TF32 576 aaPredicted RBP10.1□□□□□ -0.79
SCARNA20.5-201ENST00000516991 LINC00467Q9BRT7 94 aa10.1□□□□□ -0.79
SCARNA20.5-201ENST00000516991 SLC39A9Q9NUM3 307 aa10.1□□□□□ -0.79
SCARNA20.5-201ENST00000516991 ZNF586Q9NXT0 402 aa10.1□□□□□ -0.79
SCARNA20.5-201ENST00000516991 LRP1BQ9NZR2 4599 aa10.09□□□□□ -0.79
SCARNA20.5-201ENST00000516991 TRBV19A0A075B6N1 114 aa10.09□□□□□ -0.79
SCARNA20.5-201ENST00000516991 TRGV2A0A075B6R0 118 aa10.09□□□□□ -0.79
SCARNA20.5-201ENST00000516991 C5orf51A6NDU8 294 aa10.09□□□□□ -0.79
SCARNA20.5-201ENST00000516991 FAM25EA8MYX2 175 aa10.09□□□□□ -0.79
SCARNA20.5-201ENST00000516991 HBG1P69891 147 aa10.09□□□□□ -0.79
SCARNA20.5-201ENST00000516991 HBG2P69892 147 aa10.09□□□□□ -0.79
SCARNA20.5-201ENST00000516991 BAXQ07812 192 aa10.09□□□□□ -0.79
SCARNA20.5-201ENST00000516991 PDE6HQ13956 83 aa10.09□□□□□ -0.79
SCARNA20.5-201ENST00000516991 STX12Q86Y82 276 aa10.09□□□□□ -0.79
SCARNA20.5-201ENST00000516991 Q8N1X5 172 aa10.09□□□□□ -0.79
SCARNA20.5-201ENST00000516991 CHAC2Q8WUX2 184 aa10.09□□□□□ -0.79
SCARNA20.5-201ENST00000516991 TMEM14CQ9P0S9 112 aa10.09□□□□□ -0.79
SCARNA20.5-201ENST00000516991 TRAV5A0A0B4J249 113 aa10.08□□□□□ -0.8
SCARNA20.5-201ENST00000516991 UBE2L5PA0A1B0GUS4 154 aa10.08□□□□□ -0.8
SCARNA20.5-201ENST00000516991 KLLNB2CW77 178 aa10.08□□□□□ -0.8
SCARNA20.5-201ENST00000516991 S100A11P31949 105 aa10.08□□□□□ -0.8
SCARNA20.5-201ENST00000516991 SULT1A1P50225 295 aa10.08□□□□□ -0.8
SCARNA20.5-201ENST00000516991 ANXA2RQ3ZCQ2 193 aa10.08□□□□□ -0.8
SCARNA20.5-201ENST00000516991 C11orf72Q8NBR9 251 aa10.08□□□□□ -0.8
SCARNA20.5-201ENST00000516991 C2orf50Q96LR7 162 aa10.08□□□□□ -0.8
SCARNA20.5-201ENST00000516991 C11orf1Q9H5F2 150 aa10.08□□□□□ -0.8
SCARNA20.5-201ENST00000516991 A0A096LPF7 62 aa10.07□□□□□ -0.8
SCARNA20.5-201ENST00000516991 FAM24AA6NFZ4 105 aa10.07□□□□□ -0.8
SCARNA20.5-201ENST00000516991 M0R3E3 92 aa10.07□□□□□ -0.8
SCARNA20.5-201ENST00000516991 LYRM1O43325 122 aa10.07□□□□□ -0.8
SCARNA20.5-201ENST00000516991 MPDU1O75352 247 aa10.07□□□□□ -0.8
SCARNA20.5-201ENST00000516991 HIST1H1EP10412 219 aaKnown RBP10.07□□□□□ -0.8
SCARNA20.5-201ENST00000516991 EIF4E3Q8N5X7 224 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms