RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 SMPXQ9UHP9 88 aa8.88□□□□□ -0.99
TRIM41-209ENST00000515834 B3GALT5-AS1P59052 145 aa8.88□□□□□ -0.99
TRIM41-209ENST00000515834 NUP35Q8NFH5 326 aa8.88□□□□□ -0.99
TRIM41-209ENST00000515834 DEFB105AQ8NG35 78 aa8.88□□□□□ -0.99
TRIM41-209ENST00000515834 TSSC4Q9Y5U2 329 aaPredicted RBP8.88□□□□□ -0.99
TRIM41-209ENST00000515834 RALGAPA2Q2PPJ7 1873 aa8.88□□□□□ -0.99
TRIM41-209ENST00000515834 ZNF581Q9P0T4 197 aa8.88□□□□□ -0.99
TRIM41-209ENST00000515834 Q6ZQT7 251 aa8.87□□□□□ -0.99
TRIM41-209ENST00000515834 DOCK8Q8NF50 2099 aa8.87□□□□□ -0.99
TRIM41-209ENST00000515834 MMP23AO75900 390 aa8.87□□□□□ -0.99
TRIM41-209ENST00000515834 GLRX5Q86SX6 157 aa8.87□□□□□ -0.99
TRIM41-209ENST00000515834 A0A1W2PPI3 338 aa8.87□□□□□ -0.99
TRIM41-209ENST00000515834 DEFB136Q30KP8 78 aa8.87□□□□□ -0.99
TRIM41-209ENST00000515834 OVOL2Q9BRP0 275 aa8.87□□□□□ -0.99
TRIM41-209ENST00000515834 CARHSP1Q9Y2V2 147 aaKnown RBP8.87□□□□□ -0.99
TRIM41-209ENST00000515834 LMO1P25800 156 aa8.87□□□□□ -0.99
TRIM41-209ENST00000515834 TCF15Q12870 199 aa8.87□□□□□ -0.99
TRIM41-209ENST00000515834 BCL6BQ8N143 479 aaPredicted RBP8.87□□□□□ -0.99
TRIM41-209ENST00000515834 WNK3Q9BYP7 1800 aa8.87□□□□□ -0.99
TRIM41-209ENST00000515834 hDV102S1A0JD36 115 aa8.87□□□□□ -0.99
TRIM41-209ENST00000515834 RPL18AQ02543 176 aaKnown RBP8.87□□□□□ -0.99
TRIM41-209ENST00000515834 PRSS33Q8NF86 280 aa8.87□□□□□ -0.99
TRIM41-209ENST00000515834 SCRT2Q9NQ03 307 aa8.87□□□□□ -0.99
TRIM41-209ENST00000515834 MED12Q93074 2177 aa8.87□□□□□ -0.99
TRIM41-209ENST00000515834 RNASE2P10153 161 aaKnown RBP8.86□□□□□ -0.99
TRIM41-209ENST00000515834 HSD52Q0P140 79 aa8.86□□□□□ -0.99
TRIM41-209ENST00000515834 ATP6V0BQ99437 205 aa8.86□□□□□ -0.99
TRIM41-209ENST00000515834 TP53TG1Q9Y2A0 90 aa8.86□□□□□ -0.99
TRIM41-209ENST00000515834 IGHV1OR15-1A0A075B7D0 117 aa8.86□□□□□ -0.99
TRIM41-209ENST00000515834 CCL24O00175 119 aa8.86□□□□□ -0.99
TRIM41-209ENST00000515834 NOP10Q9NPE3 64 aaKnown RBP8.86□□□□□ -0.99
TRIM41-209ENST00000515834 GUSBP1Q15486 140 aa8.86□□□□□ -0.99
TRIM41-209ENST00000515834 LCTP09848 1927 aa8.86□□□□□ -0.99
TRIM41-209ENST00000515834 H0YIZ8 118 aa8.86□□□□□ -0.99
TRIM41-209ENST00000515834 PNRC2Q9NPJ4 139 aaKnown RBP8.86□□□□□ -0.99
TRIM41-209ENST00000515834 DEFB112Q30KQ8 113 aa8.86□□□□□ -0.99
TRIM41-209ENST00000515834 DUX4L9Q6RFH8 374 aaPredicted RBP8.86□□□□□ -0.99
TRIM41-209ENST00000515834 I3L3M4 83 aa8.86□□□□□ -0.99
TRIM41-209ENST00000515834 RHODO00212 210 aa8.86□□□□□ -0.99
TRIM41-209ENST00000515834 C17orf82Q86X59 251 aaPredicted RBP8.86□□□□□ -0.99
TRIM41-209ENST00000515834 PHF3Q92576 2039 aaKnown RBP8.86□□□□□ -0.99
TRIM41-209ENST00000515834 SHANK2-AS3Q9BTD1 123 aa8.86□□□□□ -0.99
TRIM41-209ENST00000515834 SMIM2Q9BVW6 85 aa8.86□□□□□ -0.99
TRIM41-209ENST00000515834 DEFB113Q30KQ7 82 aa8.85□□□□□ -0.99
TRIM41-209ENST00000515834 ACACAQ13085 2346 aa8.85□□□□□ -0.99
TRIM41-209ENST00000515834 CD5LO43866 347 aa8.85□□□□□ -0.99
TRIM41-209ENST00000515834 IGHV4-59P01825 116 aa8.85□□□□□ -0.99
TRIM41-209ENST00000515834 NOTCH3Q9UM47 2321 aa8.85□□□□□ -0.99
TRIM41-209ENST00000515834 TEX48A0A1B0GUV7 120 aa8.85□□□□□ -0.99
TRIM41-209ENST00000515834 RNF144BQ7Z419 303 aa8.85□□□□□ -0.99
TRIM41-209ENST00000515834 LYPD1Q8N2G4 141 aa8.85□□□□□ -0.99
TRIM41-209ENST00000515834 A0A1B0GUS0 222 aa8.85□□□□□ -0.99
TRIM41-209ENST00000515834 hADV29S1A0JD25 119 aa8.85□□□□□ -0.99
TRIM41-209ENST00000515834 CDKN1BP46527 198 aa8.85□□□□□ -0.99
TRIM41-209ENST00000515834 C8orf86Q6ZUL3 223 aa8.85□□□□□ -0.99
TRIM41-209ENST00000515834 TEX36Q5VZQ5 186 aa8.84□□□□□ -0.99
TRIM41-209ENST00000515834 LINC00479Q96M42 142 aa8.84□□□□□ -0.99
TRIM41-209ENST00000515834 WISP1O95388 367 aa8.84□□□□□ -0.99
TRIM41-209ENST00000515834 GFI1Q99684 422 aa8.84□□□□□ -0.99
TRIM41-209ENST00000515834 A0A0G2JMZ2 1700 aa8.84□□□□□ -0.99
TRIM41-209ENST00000515834 LRRC37A2A6NM11 1700 aa8.84□□□□□ -0.99
TRIM41-209ENST00000515834 TRAV26-2A0A0B4J265 109 aa8.84□□□□□ -0.99
TRIM41-209ENST00000515834 RNASE13Q5GAN3 156 aaKnown RBP8.84□□□□□ -0.99
TRIM41-209ENST00000515834 ZNF362Q5T0B9 420 aaPredicted RBP8.84□□□□□ -0.99
TRIM41-209ENST00000515834 HS3ST6Q96QI5 342 aa8.84□□□□□ -0.99
TRIM41-209ENST00000515834 FBLN5Q9UBX5 448 aa8.84□□□□□ -0.99
TRIM41-209ENST00000515834 GTF3C1Q12789 2109 aa8.84□□□□□ -0.99
TRIM41-209ENST00000515834 NEGR1Q7Z3B1 354 aa8.84□□□□□ -0.99
TRIM41-209ENST00000515834 HLA-DRB4P13762 266 aa8.84□□□□□ -1
TRIM41-209ENST00000515834 PCP4P48539 62 aa8.84□□□□□ -1
TRIM41-209ENST00000515834 IFITM2Q01629 132 aa8.84□□□□□ -1
TRIM41-209ENST00000515834 HLA-DRB4X5D2U9 266 aa8.84□□□□□ -1
TRIM41-209ENST00000515834 XCL1P47992 114 aa8.83□□□□□ -1
TRIM41-209ENST00000515834 C9orf66Q5T8R8 295 aa8.83□□□□□ -1
TRIM41-209ENST00000515834 TMEM213A2RRL7 107 aa8.83□□□□□ -1
TRIM41-209ENST00000515834 NDUFS7O75251 213 aa8.83□□□□□ -1
TRIM41-209ENST00000515834 Q86TA4 180 aa8.83□□□□□ -1
TRIM41-209ENST00000515834 SRSF8Q9BRL6 282 aaKnown RBP8.83□□□□□ -1
TRIM41-209ENST00000515834 A0A087X0K7 114 aa8.83□□□□□ -1
TRIM41-209ENST00000515834 LY6G6FQ5SQ64 297 aa8.83□□□□□ -1
TRIM41-209ENST00000515834 PIFOQ8TCI5 191 aa8.83□□□□□ -1
TRIM41-209ENST00000515834 NRGNQ92686 78 aa8.83□□□□□ -1
TRIM41-209ENST00000515834 CHAC1Q9BUX1 264 aa8.83□□□□□ -1
TRIM41-209ENST00000515834 COL4A6Q14031 1691 aa8.83□□□□□ -1
TRIM41-209ENST00000515834 TICRRQ7Z2Z1 1910 aa8.83□□□□□ -1
TRIM41-209ENST00000515834 CSRP3P50461 194 aa8.83□□□□□ -1
TRIM41-209ENST00000515834 IGHV4-4A0A075B6R2 117 aa8.83□□□□□ -1
TRIM41-209ENST00000515834 LINC00518Q8N0U6 118 aa8.83□□□□□ -1
TRIM41-209ENST00000515834 NMSQ5H8A3 153 aa8.82□□□□□ -1
TRIM41-209ENST00000515834 ATRAIDQ6UW56 229 aa8.82□□□□□ -1
TRIM41-209ENST00000515834 C15orf62A8K5M9 175 aa8.82□□□□□ -1
TRIM41-209ENST00000515834 F8W735 103 aaPredicted RBP8.82□□□□□ -1
TRIM41-209ENST00000515834 NDUFA4O00483 81 aa8.82□□□□□ -1
TRIM41-209ENST00000515834 TIMM17AQ99595 171 aa8.82□□□□□ -1
TRIM41-209ENST00000515834 LINC01559Q495D7 138 aa8.82□□□□□ -1
TRIM41-209ENST00000515834 USF3Q68DE3 2245 aa8.82□□□□□ -1
TRIM41-209ENST00000515834 GRNP28799 593 aaKnown RBP8.82□□□□□ -1
TRIM41-209ENST00000515834 ESM1Q9NQ30 184 aa8.82□□□□□ -1
TRIM41-209ENST00000515834 CCL18P55774 89 aa8.81□□□□□ -1
TRIM41-209ENST00000515834 ZC2HC1BQ5TFG8 222 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms