RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 WDR61Q9GZS3 305 aaKnown RBP1.73□□□□□ -2.13
HERC4-215ENST00000515753 ABCG5Q9H222 651 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 TIMM22Q9Y584 194 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 CACNA1DQ01668 2161 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 NBASA2RRP1 2371 aa1.73□□□□□ -2.13
HERC4-215ENST00000515753 TNRC6AQ8NDV7 1962 aaKnown RBP1.72□□□□□ -2.13
HERC4-215ENST00000515753 TEX15Q9BXT5 2789 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 CSMD1Q96PZ7 3565 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 IGHV3-15A0A0B4J1V0 119 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 IGHV3-73A0A0B4J1V6 119 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 IGHV1-18A0A0C4DH31 117 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 A0A1B0GU33 70 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 OR11H12B2RN74 326 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 CLDN25C9JDP6 229 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 ATP6V1G2-DDX39BF2Z307 99 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 LY6HO94772 140 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 ZNF682O95780 498 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 IGHV1-69P01742 117 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 C1QBP02746 253 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 TFPTP0C1Z6 253 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 PPIBP23284 216 aaKnown RBP1.72□□□□□ -2.13
HERC4-215ENST00000515753 BLVRBP30043 206 aaPredicted RBP1.72□□□□□ -2.13
HERC4-215ENST00000515753 GUCA1AP43080 201 aaPredicted RBP1.72□□□□□ -2.13
HERC4-215ENST00000515753 LPAR6P43657 344 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 FXYD7P58549 80 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 TAS2R41P59536 307 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 RPL38P63173 70 aaKnown RBP1.72□□□□□ -2.13
HERC4-215ENST00000515753 GNG3P63215 75 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 EMX2Q04743 252 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 AKR1C1Q04828 323 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 WHAMMP3Q1A5X7 153 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 TMEM136Q6ZRR5 245 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 GOLT1AQ6ZVE7 132 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 C12orf45Q8N5I9 185 aaPredicted RBP1.72□□□□□ -2.13
HERC4-215ENST00000515753 ZNF283Q8N7M2 679 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 Q8NAQ8 132 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 OR10P1Q8NGE3 313 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 OR11H2Q8NH07 326 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 CLDND2Q8NHS1 167 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 RPS4Y2Q8TD47 263 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 GPR146Q96CH1 333 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 CCDC90BQ9GZT6 254 aa1.72□□□□□ -2.13
HERC4-215ENST00000515753 NCOA6Q14686 2063 aaPredicted RBP1.71□□□□□ -2.13
HERC4-215ENST00000515753 HIVEP2P31629 2446 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 OTOGQ6ZRI0 2925 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 BOD1L1Q8NFC6 3051 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 IGLV3-9A0A075B6K5 115 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 TRAV9-1A0A075B6T8 112 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 TRAPPC13A5PLN9 417 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 PRORSD1PA6NEY8 169 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 GGTLC3B5MD39 225 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 AIPO00170 330 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 PSCAO43653 123 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 PIAS1O75925 651 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 NPYP01303 97 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 IFNA10P01566 189 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 RPSAP08865 295 aaKnown RBP1.71□□□□□ -2.14
HERC4-215ENST00000515753 ERP29P30040 261 aaKnown RBP1.71□□□□□ -2.14
HERC4-215ENST00000515753 S100A3P33764 101 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 RAB13P51153 203 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 TAS2R30P59541 319 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 NCALDP61601 193 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 RPS11P62280 158 aaKnown RBP eCLIP1.71□□□□□ -2.14
HERC4-215ENST00000515753 RPL30P62888 115 aaKnown RBP1.71□□□□□ -2.14
HERC4-215ENST00000515753 UBA52P62987 128 aaKnown RBP1.71□□□□□ -2.14
HERC4-215ENST00000515753 HBA1P69905 142 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 CCL20P78556 96 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 FLI1Q01543 452 aaPredicted RBP1.71□□□□□ -2.14
HERC4-215ENST00000515753 TNFRSF9Q07011 255 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 BAMBIQ13145 260 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 LY6EQ16553 131 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 TMEM155Q4W5P6 130 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 AKR1C8PQ5T2L2 129 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 C1orf140Q5VVS0 124 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 AMMECR1LQ6DCA0 310 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 IGFL1Q6UW32 110 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 SPATA12Q7Z6I5 190 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 CROCCP2Q86T23 111 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 EIF4E3Q8N5X7 224 aaKnown RBP1.71□□□□□ -2.14
HERC4-215ENST00000515753 C1orf64Q8NEQ6 169 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 PYDC1Q8WXC3 89 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 SLC7A6Q92536 515 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 TOMM6Q96B49 74 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 ERMAPQ96PL5 475 aaPredicted RBP1.71□□□□□ -2.14
HERC4-215ENST00000515753 GINS3Q9BRX5 216 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 TMEM70Q9BUB7 260 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 SH3BGRL3Q9H299 93 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 DUSP21Q9H596 190 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 EFCAB1Q9HAE3 211 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 BCL2L10Q9HD36 194 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 MARCOQ9UEW3 520 aaPredicted RBP1.71□□□□□ -2.14
HERC4-215ENST00000515753 NOP16Q9Y3C1 178 aaKnown RBP1.71□□□□□ -2.14
HERC4-215ENST00000515753 UFC1Q9Y3C8 167 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 DNAJC15Q9Y5T4 150 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 DNHD1Q96M86 4753 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 HIVEP3Q5T1R4 2406 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 DSCAMO60469 2012 aa1.71□□□□□ -2.14
HERC4-215ENST00000515753 RP1L1Q8IWN7 2480 aaPredicted RBP1.71□□□□□ -2.14
HERC4-215ENST00000515753 TRAV36DV7A0A075B6V5 113 aa1.7□□□□□ -2.14
HERC4-215ENST00000515753 CLPSL1A2RUU4 121 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms