RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 HLA-DMBP28068 263 aa8.74□□□□□ -1.01
SNF8-215ENST00000515572 SLC51BQ86UW2 128 aa8.74□□□□□ -1.01
SNF8-215ENST00000515572 OR8A1Q8NGG7 326 aa8.74□□□□□ -1.01
SNF8-215ENST00000515572 C1QTNF4Q9BXJ3 329 aa8.74□□□□□ -1.01
SNF8-215ENST00000515572 HMGB3O15347 200 aaKnown RBP8.73□□□□□ -1.01
SNF8-215ENST00000515572 CA1P00915 261 aaPredicted RBP8.73□□□□□ -1.01
SNF8-215ENST00000515572 DEFB1P60022 68 aa8.73□□□□□ -1.01
SNF8-215ENST00000515572 DPPA3Q6W0C5 159 aa8.73□□□□□ -1.01
SNF8-215ENST00000515572 OR4B1Q8NGF8 309 aa8.73□□□□□ -1.01
SNF8-215ENST00000515572 OR10J6PQ8NGY7 276 aa8.73□□□□□ -1.01
SNF8-215ENST00000515572 PHYHIPLQ96FC7 376 aa8.73□□□□□ -1.01
SNF8-215ENST00000515572 RCHY1Q96PM5 261 aa8.73□□□□□ -1.01
SNF8-215ENST00000515572 TMEM167BQ9NRX6 74 aa8.73□□□□□ -1.01
SNF8-215ENST00000515572 U3KQK5 164 aa8.73□□□□□ -1.01
SNF8-215ENST00000515572 COL7A1Q02388 2944 aa8.73□□□□□ -1.01
SNF8-215ENST00000515572 ZNF705FA8MVS1 300 aaPredicted RBP8.72□□□□□ -1.01
SNF8-215ENST00000515572 EIF3GO75821 320 aaKnown RBP eCLIP8.72□□□□□ -1.01
SNF8-215ENST00000515572 IGKV3-20P01619 116 aa8.72□□□□□ -1.01
SNF8-215ENST00000515572 GCHFRP30047 84 aa8.72□□□□□ -1.01
SNF8-215ENST00000515572 CNN1P51911 297 aaKnown RBP8.72□□□□□ -1.01
SNF8-215ENST00000515572 RANP62826 216 aaKnown RBP8.72□□□□□ -1.01
SNF8-215ENST00000515572 HIST1H1AQ02539 215 aaPredicted RBP8.72□□□□□ -1.01
SNF8-215ENST00000515572 ICAM4Q14773 271 aa8.72□□□□□ -1.01
SNF8-215ENST00000515572 DEFB135Q30KP9 77 aa8.72□□□□□ -1.01
SNF8-215ENST00000515572 FAM74A1Q5RGS3 127 aa8.72□□□□□ -1.01
SNF8-215ENST00000515572 EXOC3-AS1Q8N2X6 119 aa8.72□□□□□ -1.01
SNF8-215ENST00000515572 SUN5Q8TC36 379 aa8.72□□□□□ -1.01
SNF8-215ENST00000515572 TMED6Q8WW62 240 aa8.72□□□□□ -1.01
SNF8-215ENST00000515572 RNF183Q96D59 192 aa8.72□□□□□ -1.01
SNF8-215ENST00000515572 Q9H3A6 140 aa8.72□□□□□ -1.01
SNF8-215ENST00000515572 SPRY2O43597 315 aa8.71□□□□□ -1.02
SNF8-215ENST00000515572 AMBPP02760 352 aa8.71□□□□□ -1.02
SNF8-215ENST00000515572 CSN1S1P47710 185 aa8.71□□□□□ -1.02
SNF8-215ENST00000515572 RAB5CP51148 216 aa8.71□□□□□ -1.02
SNF8-215ENST00000515572 ZNF726P1Q15940 193 aa8.71□□□□□ -1.02
SNF8-215ENST00000515572 OVOL2Q9BRP0 275 aa8.71□□□□□ -1.02
SNF8-215ENST00000515572 RETNQ9HD89 108 aa8.71□□□□□ -1.02
SNF8-215ENST00000515572 TGP01266 2768 aa8.71□□□□□ -1.02
SNF8-215ENST00000515572 MAP1LC3B2A6NCE7 125 aa8.7□□□□□ -1.02
SNF8-215ENST00000515572 M0R3E3 92 aa8.7□□□□□ -1.02
SNF8-215ENST00000515572 GIG44P09565 113 aaPredicted RBP8.7□□□□□ -1.02
SNF8-215ENST00000515572 ZNF705DP0CH99 300 aaPredicted RBP8.7□□□□□ -1.02
SNF8-215ENST00000515572 ZNF705BP0CI00 300 aaPredicted RBP8.7□□□□□ -1.02
SNF8-215ENST00000515572 AMTNQ6UX39 209 aa8.7□□□□□ -1.02
SNF8-215ENST00000515572 SSX7Q7RTT5 188 aa8.7□□□□□ -1.02
SNF8-215ENST00000515572 ARL6IP6Q8N6S5 226 aa8.7□□□□□ -1.02
SNF8-215ENST00000515572 RXFP4Q8TDU9 374 aa8.7□□□□□ -1.02
SNF8-215ENST00000515572 MAP1LC3BQ9GZQ8 125 aa8.7□□□□□ -1.02
SNF8-215ENST00000515572 SLC35B3Q9H1N7 401 aa8.7□□□□□ -1.02
SNF8-215ENST00000515572 OTORQ9NRC9 128 aa8.7□□□□□ -1.02
SNF8-215ENST00000515572 PPP1R14DQ9NXH3 145 aa8.7□□□□□ -1.02
SNF8-215ENST00000515572 PGPA6NDG6 321 aa8.69□□□□□ -1.02
SNF8-215ENST00000515572 PRAC2D3DTV9 90 aa8.69□□□□□ -1.02
SNF8-215ENST00000515572 NPIPB6E9PJ23 425 aa8.69□□□□□ -1.02
SNF8-215ENST00000515572 BOLA2-SMG1P6H3BVE0 249 aa8.69□□□□□ -1.02
SNF8-215ENST00000515572 TSPOP30536 169 aa8.69□□□□□ -1.02
SNF8-215ENST00000515572 FHITP49789 147 aa8.69□□□□□ -1.02
SNF8-215ENST00000515572 IQCF2Q8IXL9 164 aa8.69□□□□□ -1.02
SNF8-215ENST00000515572 CSNK1G2-AS1Q8NCQ2 148 aa8.69□□□□□ -1.02
SNF8-215ENST00000515572 CMTM2Q8TAZ6 248 aa8.69□□□□□ -1.02
SNF8-215ENST00000515572 FAM213BQ8TBF2 198 aa8.69□□□□□ -1.02
SNF8-215ENST00000515572 MBD3L1Q8WWY6 194 aa8.69□□□□□ -1.02
SNF8-215ENST00000515572 ODF3Q96PU9 254 aa8.69□□□□□ -1.02
SNF8-215ENST00000515572 PLA2G2EQ9NZK7 142 aa8.69□□□□□ -1.02
SNF8-215ENST00000515572 XCL2Q9UBD3 114 aa8.69□□□□□ -1.02
SNF8-215ENST00000515572 RBAKDNA6NC62 111 aa8.68□□□□□ -1.02
SNF8-215ENST00000515572 SLC25A5P05141 298 aaKnown RBP8.68□□□□□ -1.02
SNF8-215ENST00000515572 H2AFB1P0C5Y9 115 aa8.68□□□□□ -1.02
SNF8-215ENST00000515572 NKX2-5P52952 324 aaPredicted RBP8.68□□□□□ -1.02
SNF8-215ENST00000515572 FGF8P55075 233 aaPredicted RBP8.68□□□□□ -1.02
SNF8-215ENST00000515572 LINC00477Q96M19 166 aa8.68□□□□□ -1.02
SNF8-215ENST00000515572 A0A1W2PRE2 83 aa8.67□□□□□ -1.02
SNF8-215ENST00000515572 CDKN1BP46527 198 aa8.67□□□□□ -1.02
SNF8-215ENST00000515572 SULT1A2P50226 295 aa8.67□□□□□ -1.02
SNF8-215ENST00000515572 FXYD7P58549 80 aa8.67□□□□□ -1.02
SNF8-215ENST00000515572 SPINK13Q1W4C9 94 aa8.67□□□□□ -1.02
SNF8-215ENST00000515572 TMEM78Q5T7P6 136 aa8.67□□□□□ -1.02
SNF8-215ENST00000515572 NBEAL2Q6ZNJ1 2754 aa8.67□□□□□ -1.02
SNF8-215ENST00000515572 C9orf47Q6ZRZ4 202 aa8.67□□□□□ -1.02
SNF8-215ENST00000515572 C5orf17Q8NAS9 161 aa8.67□□□□□ -1.02
SNF8-215ENST00000515572 OR11H2Q8NH07 326 aa8.67□□□□□ -1.02
SNF8-215ENST00000515572 SFT2D1Q8WV19 159 aa8.67□□□□□ -1.02
SNF8-215ENST00000515572 IGF2BP2-AS1Q96M15 143 aa8.67□□□□□ -1.02
SNF8-215ENST00000515572 RARRES2Q99969 163 aa8.67□□□□□ -1.02
SNF8-215ENST00000515572 NKX6-2Q9C056 277 aaPredicted RBP8.67□□□□□ -1.02
SNF8-215ENST00000515572 GOLT1BQ9Y3E0 138 aa8.67□□□□□ -1.02
SNF8-215ENST00000515572 IGKV2-40A0A087WW87 121 aaPredicted RBP8.66□□□□□ -1.02
SNF8-215ENST00000515572 SERTM2A0A1B0GWG4 89 aa8.66□□□□□ -1.02
SNF8-215ENST00000515572 ZNF705EA8MWA4 302 aaPredicted RBP8.66□□□□□ -1.02
SNF8-215ENST00000515572 DIRC3C9JPN6 131 aa8.66□□□□□ -1.02
SNF8-215ENST00000515572 TEX46H3BTG2 121 aa8.66□□□□□ -1.02
SNF8-215ENST00000515572 M0R2Z0 102 aa8.66□□□□□ -1.02
SNF8-215ENST00000515572 INSP01308 110 aa8.66□□□□□ -1.02
SNF8-215ENST00000515572 IGKV2D-40P01614 121 aaPredicted RBP8.66□□□□□ -1.02
SNF8-215ENST00000515572 CT45A10P0DMU9 189 aa8.66□□□□□ -1.02
SNF8-215ENST00000515572 LEPP41159 167 aa8.66□□□□□ -1.02
SNF8-215ENST00000515572 ZNF705AQ6ZN79 300 aaPredicted RBP8.66□□□□□ -1.02
SNF8-215ENST00000515572 AGPAT4-IT1Q9H0P7 198 aa8.66□□□□□ -1.02
SNF8-215ENST00000515572 ARL2-SNX15V9GYD0 113 aa8.66□□□□□ -1.02
SNF8-215ENST00000515572 DNAH9Q9NYC9 4486 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms