RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 OR1L4Q8NGR5 311 aa10.64□□□□□ -0.71
HMGCLL1-209ENST00000515546 IGF2BP2-AS1Q96M15 143 aa10.64□□□□□ -0.71
HMGCLL1-209ENST00000515546 PFDN5Q99471 154 aa10.64□□□□□ -0.71
HMGCLL1-209ENST00000515546 SLC50A1Q9BRV3 221 aa10.64□□□□□ -0.71
HMGCLL1-209ENST00000515546 GOLT1BQ9Y3E0 138 aa10.64□□□□□ -0.71
HMGCLL1-209ENST00000515546 RFNGQ9Y644 331 aa10.64□□□□□ -0.71
HMGCLL1-209ENST00000515546 DNAH6Q9C0G6 4158 aa10.64□□□□□ -0.71
HMGCLL1-209ENST00000515546 TRAV10A0A0B4J240 114 aa10.63□□□□□ -0.71
HMGCLL1-209ENST00000515546 SLC17A3O00476 420 aa10.63□□□□□ -0.71
HMGCLL1-209ENST00000515546 TAAR5O14804 337 aa10.63□□□□□ -0.71
HMGCLL1-209ENST00000515546 CRXO43186 299 aaPredicted RBP10.63□□□□□ -0.71
HMGCLL1-209ENST00000515546 LY6G6CO95867 125 aa10.63□□□□□ -0.71
HMGCLL1-209ENST00000515546 B2MP61769 119 aa10.63□□□□□ -0.71
HMGCLL1-209ENST00000515546 C12orf74Q32Q52 190 aa10.63□□□□□ -0.71
HMGCLL1-209ENST00000515546 NPCDR1Q9BY65 106 aa10.63□□□□□ -0.71
HMGCLL1-209ENST00000515546 PARD6GQ9BYG4 376 aaPredicted RBP10.63□□□□□ -0.71
HMGCLL1-209ENST00000515546 PXMP4Q9Y6I8 212 aa10.63□□□□□ -0.71
HMGCLL1-209ENST00000515546 KANTRA0A1W2PQU2 76 aa10.62□□□□□ -0.71
HMGCLL1-209ENST00000515546 H3BQ15 152 aa10.62□□□□□ -0.71
HMGCLL1-209ENST00000515546 INSP01308 110 aa10.62□□□□□ -0.71
HMGCLL1-209ENST00000515546 ZNF266Q14584 549 aa10.62□□□□□ -0.71
HMGCLL1-209ENST00000515546 SPINK13Q1W4C9 94 aa10.62□□□□□ -0.71
HMGCLL1-209ENST00000515546 LGALS9CQ6DKI2 356 aa10.62□□□□□ -0.71
HMGCLL1-209ENST00000515546 LRRC20Q8TCA0 184 aa10.62□□□□□ -0.71
HMGCLL1-209ENST00000515546 RPUSD4Q96CM3 377 aaKnown RBP10.62□□□□□ -0.71
HMGCLL1-209ENST00000515546 SAT2Q96F10 170 aaPredicted RBP10.62□□□□□ -0.71
HMGCLL1-209ENST00000515546 IGHV3OR16-12A0A075B7B8 117 aa10.61□□□□□ -0.71
HMGCLL1-209ENST00000515546 TRAV5A0A0B4J249 113 aa10.61□□□□□ -0.71
HMGCLL1-209ENST00000515546 M0R2Z0 102 aa10.61□□□□□ -0.71
HMGCLL1-209ENST00000515546 IFNA5P01569 189 aa10.61□□□□□ -0.71
HMGCLL1-209ENST00000515546 HIST1H1AQ02539 215 aaPredicted RBP10.61□□□□□ -0.71
HMGCLL1-209ENST00000515546 GUK1Q16774 197 aa10.61□□□□□ -0.71
HMGCLL1-209ENST00000515546 HSD17B11Q8NBQ5 300 aa10.61□□□□□ -0.71
HMGCLL1-209ENST00000515546 ZNF471Q9BX82 626 aaPredicted RBP10.61□□□□□ -0.71
HMGCLL1-209ENST00000515546 APLNQ9ULZ1 77 aa10.61□□□□□ -0.71
HMGCLL1-209ENST00000515546 BORCS7-ASMTA0A0B4J1R7 106 aa10.6□□□□□ -0.71
HMGCLL1-209ENST00000515546 TEX48A0A1B0GUV7 120 aa10.6□□□□□ -0.71
HMGCLL1-209ENST00000515546 H3BTX0 84 aa10.6□□□□□ -0.71
HMGCLL1-209ENST00000515546 ZNF253O75346 499 aa10.6□□□□□ -0.71
HMGCLL1-209ENST00000515546 HBE1P02100 147 aa10.6□□□□□ -0.71
HMGCLL1-209ENST00000515546 SNRPCP09234 159 aaKnown RBP10.6□□□□□ -0.71
HMGCLL1-209ENST00000515546 SPART-AS1P0CW21 52 aa10.6□□□□□ -0.71
HMGCLL1-209ENST00000515546 ATP6V0CP27449 155 aa10.6□□□□□ -0.71
HMGCLL1-209ENST00000515546 BAP18Q8IXM2 172 aa10.6□□□□□ -0.71
HMGCLL1-209ENST00000515546 SCGB1C1Q8TD33 95 aa10.6□□□□□ -0.71
HMGCLL1-209ENST00000515546 SH3BGRL3Q9H299 93 aa10.6□□□□□ -0.71
HMGCLL1-209ENST00000515546 TMEM14CQ9P0S9 112 aa10.6□□□□□ -0.71
HMGCLL1-209ENST00000515546 DKK2Q9UBU2 259 aa10.6□□□□□ -0.71
HMGCLL1-209ENST00000515546 BIRC6Q9NR09 4857 aa10.59□□□□□ -0.71
HMGCLL1-209ENST00000515546 LOC102723971A0A1B0GUV8 181 aa10.59□□□□□ -0.71
HMGCLL1-209ENST00000515546 IGLL5B9A064 214 aa10.59□□□□□ -0.71
HMGCLL1-209ENST00000515546 GCSAMLQ5JQS6 135 aa10.59□□□□□ -0.71
HMGCLL1-209ENST00000515546 ZNF767PQ75MW2 155 aa10.59□□□□□ -0.71
HMGCLL1-209ENST00000515546 STOML3Q8TAV4 291 aa10.59□□□□□ -0.71
HMGCLL1-209ENST00000515546 KCNIP2Q9NS61 270 aa10.59□□□□□ -0.71
HMGCLL1-209ENST00000515546 ZNF586Q9NXT0 402 aa10.59□□□□□ -0.71
HMGCLL1-209ENST00000515546 PRAC2D3DTV9 90 aa10.58□□□□□ -0.72
HMGCLL1-209ENST00000515546 EMP1P54849 157 aa10.58□□□□□ -0.72
HMGCLL1-209ENST00000515546 RRN3P1Q2M238 152 aa10.58□□□□□ -0.72
HMGCLL1-209ENST00000515546 FAM222AQ5U5X8 452 aa10.58□□□□□ -0.72
HMGCLL1-209ENST00000515546 TMEM208Q9BTX3 173 aa10.58□□□□□ -0.72
HMGCLL1-209ENST00000515546 TIMM9Q9Y5J7 89 aa10.58□□□□□ -0.72
HMGCLL1-209ENST00000515546 DNAH10Q8IVF4 4471 aa10.58□□□□□ -0.72
HMGCLL1-209ENST00000515546 FRAS1Q86XX4 4008 aa10.57□□□□□ -0.72
HMGCLL1-209ENST00000515546 TRBV19A0A075B6N1 114 aa10.57□□□□□ -0.72
HMGCLL1-209ENST00000515546 IGHV4-4A0A075B6R2 117 aa10.57□□□□□ -0.72
HMGCLL1-209ENST00000515546 TRAV12-2A0A075B6T6 113 aa10.57□□□□□ -0.72
HMGCLL1-209ENST00000515546 DEFB131BA0A096LNP1 70 aa10.57□□□□□ -0.72
HMGCLL1-209ENST00000515546 PRB4P10163 310 aaPredicted RBP10.57□□□□□ -0.72
HMGCLL1-209ENST00000515546 TSPOP30536 169 aa10.57□□□□□ -0.72
HMGCLL1-209ENST00000515546 RHOBP62745 196 aa10.57□□□□□ -0.72
HMGCLL1-209ENST00000515546 PDE6HQ13956 83 aa10.57□□□□□ -0.72
HMGCLL1-209ENST00000515546 SLC51BQ86UW2 128 aa10.57□□□□□ -0.72
HMGCLL1-209ENST00000515546 MRPL53Q96EL3 112 aaKnown RBP10.57□□□□□ -0.72
HMGCLL1-209ENST00000515546 FAM167A-AS1Q96KT0 104 aa10.57□□□□□ -0.72
HMGCLL1-209ENST00000515546 PSMG3Q9BT73 122 aaPredicted RBP10.57□□□□□ -0.72
HMGCLL1-209ENST00000515546 PLA2G2EQ9NZK7 142 aa10.57□□□□□ -0.72
HMGCLL1-209ENST00000515546 YTHDF2Q9Y5A9 579 aaKnown RBP10.57□□□□□ -0.72
HMGCLL1-209ENST00000515546 NPIPB6E9PJ23 425 aa10.56□□□□□ -0.72
HMGCLL1-209ENST00000515546 NDUFB4O95168 129 aa10.56□□□□□ -0.72
HMGCLL1-209ENST00000515546 HIST1H1EP10412 219 aaKnown RBP10.56□□□□□ -0.72
HMGCLL1-209ENST00000515546 TPT1P13693 172 aaKnown RBP10.56□□□□□ -0.72
HMGCLL1-209ENST00000515546 CDKN1BP46527 198 aa10.56□□□□□ -0.72
HMGCLL1-209ENST00000515546 TMEM256Q8N2U0 113 aa10.56□□□□□ -0.72
HMGCLL1-209ENST00000515546 RPP25LQ8N5L8 163 aaKnown RBP10.56□□□□□ -0.72
HMGCLL1-209ENST00000515546 OR10J6PQ8NGY7 276 aa10.56□□□□□ -0.72
HMGCLL1-209ENST00000515546 ODF3Q96PU9 254 aa10.56□□□□□ -0.72
HMGCLL1-209ENST00000515546 NIPSNAP3BQ9BS92 247 aa10.56□□□□□ -0.72
HMGCLL1-209ENST00000515546 SLC25A2Q9BXI2 301 aa10.56□□□□□ -0.72
HMGCLL1-209ENST00000515546 PLAC8L1A1L4L8 177 aa10.55□□□□□ -0.72
HMGCLL1-209ENST00000515546 ZNF705GA8MUZ8 300 aaPredicted RBP10.55□□□□□ -0.72
HMGCLL1-209ENST00000515546 C17orf112F2Z3M2 114 aa10.55□□□□□ -0.72
HMGCLL1-209ENST00000515546 PYYP10082 97 aa10.55□□□□□ -0.72
HMGCLL1-209ENST00000515546 FFAR4Q5NUL3 377 aa10.55□□□□□ -0.72
HMGCLL1-209ENST00000515546 OR2G3Q8NGZ4 309 aa10.55□□□□□ -0.72
HMGCLL1-209ENST00000515546 GNPNAT1Q96EK6 184 aaPredicted RBP10.55□□□□□ -0.72
HMGCLL1-209ENST00000515546 MRPL32Q9BYC8 188 aaKnown RBP10.55□□□□□ -0.72
HMGCLL1-209ENST00000515546 PPP1R14DQ9NXH3 145 aa10.55□□□□□ -0.72
HMGCLL1-209ENST00000515546 TAS2R60P59551 318 aa10.54□□□□□ -0.72
HMGCLL1-209ENST00000515546 RAB2AP61019 212 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms