RNA–Protein interactions for RNA: ENST00000515460.5

NUP54-218, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-218ENST00000515460 CXCL13O43927 109 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 SS18L1O75177 396 aaPredicted RBP4.32□□□□□ -1.72
NUP54-218ENST00000515460 NDUFS7O75251 213 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 SNCGO76070 127 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 IGHV3-7P01780 117 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 SLC25A5P05141 298 aaKnown RBP4.32□□□□□ -1.72
NUP54-218ENST00000515460 ATP5G1P05496 136 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 MYOD1P15172 320 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 B4GALT1P15291 398 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 CNTFRP26992 372 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 ATP5G3P48201 142 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 RPL31P62899 125 aaKnown RBP4.32□□□□□ -1.72
NUP54-218ENST00000515460 ATP5G2Q06055 141 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 NOXRED1Q6NXP6 359 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 MORN3Q6PF18 240 aaPredicted RBP4.32□□□□□ -1.72
NUP54-218ENST00000515460 DUX4L9Q6RFH8 374 aaPredicted RBP4.32□□□□□ -1.72
NUP54-218ENST00000515460 TMEM123Q8N131 208 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 OR11H6Q8NGC7 330 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 OR4C13Q8NGP0 309 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 OR1L8Q8NGR8 309 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 RDH5Q92781 318 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 AMELYQ99218 206 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 LINC01587Q99440 93 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 FAM103A1Q9BTL3 118 aaKnown RBP4.32□□□□□ -1.72
NUP54-218ENST00000515460 KCNK15Q9H427 330 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 SLC25A10Q9UBX3 287 aaPredicted RBP4.32□□□□□ -1.72
NUP54-218ENST00000515460 PRNDQ9UKY0 176 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 ANAPC10Q9UM13 185 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 FOXA2Q9Y261 457 aaPredicted RBP4.32□□□□□ -1.72
NUP54-218ENST00000515460 INSIG2Q9Y5U4 225 aa4.32□□□□□ -1.72
NUP54-218ENST00000515460 IGLV5-52A0A0A0MRZ9 124 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 TRAV24A0A0B4J272 114 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 A0A0J9YW62 118 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 CEBPZOSA8MTT3 80 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 C17orf100A8MU93 164 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 EFNA2O43921 213 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 NDUFA7O95182 113 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 IGHV4-39P01824 125 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 HLA-DQA1P01909 254 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 OR5AL1P0C617 328 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 LINC00694P0DN24 101 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 GATA2P23769 480 aaPredicted RBP4.31□□□□□ -1.72
NUP54-218ENST00000515460 PSMB3P49720 205 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 DIAPH2-AS1Q14236 149 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 ZNF672Q499Z4 452 aaPredicted RBP4.31□□□□□ -1.72
NUP54-218ENST00000515460 FAM159AQ6UWV7 190 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 AMTNQ6UX39 209 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 IL17RELQ6ZVW7 336 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 OR1F12Q8NHA8 337 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 GTSF1Q8WW33 167 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 RASL10AQ92737 203 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 RAB37Q96AX2 223 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 NEURL3Q96EH8 262 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 PELI1Q96FA3 418 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 C20orf78Q9BR46 151 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 TXNDC17Q9BRA2 123 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 PRRG4Q9BZD6 226 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 GLIPR2Q9H4G4 154 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 GNB4Q9HAV0 340 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 BCL2L10Q9HD36 194 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 IL36BQ9NZH7 164 aa4.31□□□□□ -1.72
NUP54-218ENST00000515460 DNAJC13O75165 2243 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 A0A096LNT2 108 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 TRAV5A0A0B4J249 113 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 PIGBOS1A0A0B4J2F0 54 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 A0A1B0GV50 99 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 ZFP92A6NM28 416 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 RIIAD1A6NNX1 92 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 E9PLD3 99 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 C11orf98E9PRG8 122 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 FCN1O00602 326 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 ATP5LO75964 103 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 NKX2-2O95096 273 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 NCR2O95944 276 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 NAPSAO96009 420 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 NCBP2P52298 156 aaKnown RBP eCLIP4.3□□□□□ -1.72
NUP54-218ENST00000515460 GNG5P63218 68 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 SERF2P84101 59 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 CEACAM16Q2WEN9 425 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 ZNF718Q3SXZ3 478 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 ETDBQ3ZM63 59 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 Q56UQ5 140 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 IBA57Q5T440 356 aaKnown RBP4.3□□□□□ -1.72
NUP54-218ENST00000515460 LYRM7Q5U5X0 104 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 FAM166AQ6J272 317 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 Q6ZS49 121 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 C2orf91Q6ZV80 131 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 CLECL1Q8IZS7 167 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 ATOH7Q8N100 152 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 ZNF645Q8N7E2 425 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 LRTM2Q8N967 370 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 TSKUQ8WUA8 353 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 BAALCQ8WXS3 180 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 TMEM230Q96A57 120 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 FAM3DQ96BQ1 224 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 ZNF524Q96C55 264 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 PRELID3AQ96N28 172 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 LYSTQ99698 3801 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 RASL11BQ9BPW5 248 aa4.3□□□□□ -1.72
NUP54-218ENST00000515460 SRXN1Q9BYN0 137 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms