RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 GGTLC3B5MD39 225 aa8.89□□□□□ -0.99
PDLIM5-220ENST00000514830 IFNA1P01562 189 aa8.89□□□□□ -0.99
PDLIM5-220ENST00000514830 SNRPCP09234 159 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-220ENST00000514830 CD7P09564 240 aa8.89□□□□□ -0.99
PDLIM5-220ENST00000514830 RAB14P61106 215 aa8.89□□□□□ -0.99
PDLIM5-220ENST00000514830 ICAM4Q14773 271 aa8.89□□□□□ -0.99
PDLIM5-220ENST00000514830 PSMG4Q5JS54 123 aa8.89□□□□□ -0.99
PDLIM5-220ENST00000514830 FOXI2Q6ZQN5 318 aa8.89□□□□□ -0.99
PDLIM5-220ENST00000514830 IQCF2Q8IXL9 164 aa8.89□□□□□ -0.99
PDLIM5-220ENST00000514830 EXOC3-AS1Q8N2X6 119 aa8.89□□□□□ -0.99
PDLIM5-220ENST00000514830 C5orf17Q8NAS9 161 aa8.89□□□□□ -0.99
PDLIM5-220ENST00000514830 SERTM2A0A1B0GWG4 89 aa8.88□□□□□ -0.99
PDLIM5-220ENST00000514830 RBAKDNA6NC62 111 aa8.88□□□□□ -0.99
PDLIM5-220ENST00000514830 PGPA6NDG6 321 aa8.88□□□□□ -0.99
PDLIM5-220ENST00000514830 SLC25A5P05141 298 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-220ENST00000514830 BCL2P10415 239 aa8.88□□□□□ -0.99
PDLIM5-220ENST00000514830 DEFB131AP59861 70 aa8.88□□□□□ -0.99
PDLIM5-220ENST00000514830 RNF182Q8N6D2 247 aa8.88□□□□□ -0.99
PDLIM5-220ENST00000514830 SAV1Q9H4B6 383 aaPredicted RBP8.88□□□□□ -0.99
PDLIM5-220ENST00000514830 A0A0J9YX75 114 aa8.87□□□□□ -0.99
PDLIM5-220ENST00000514830 M0R3E3 92 aa8.87□□□□□ -0.99
PDLIM5-220ENST00000514830 PAGE4O60829 102 aa8.87□□□□□ -0.99
PDLIM5-220ENST00000514830 HLA-DRB4P13762 266 aa8.87□□□□□ -0.99
PDLIM5-220ENST00000514830 HLA-DMBP28068 263 aa8.87□□□□□ -0.99
PDLIM5-220ENST00000514830 CSN1S1P47710 185 aa8.87□□□□□ -0.99
PDLIM5-220ENST00000514830 SUMO1P63165 101 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-220ENST00000514830 IGFL4Q6B9Z1 124 aa8.87□□□□□ -0.99
PDLIM5-220ENST00000514830 ZNF738Q8NE65 137 aa8.87□□□□□ -0.99
PDLIM5-220ENST00000514830 HIST1H2BAQ96A08 127 aa8.87□□□□□ -0.99
PDLIM5-220ENST00000514830 RPUSD4Q96CM3 377 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-220ENST00000514830 LINC00052Q96N35 136 aa8.87□□□□□ -0.99
PDLIM5-220ENST00000514830 PRR25Q96S07 402 aa8.87□□□□□ -0.99
PDLIM5-220ENST00000514830 PPP1R14DQ9NXH3 145 aa8.87□□□□□ -0.99
PDLIM5-220ENST00000514830 GNG13Q9P2W3 67 aa8.87□□□□□ -0.99
PDLIM5-220ENST00000514830 VAX2Q9UIW0 290 aa8.87□□□□□ -0.99
PDLIM5-220ENST00000514830 HLA-DRB4X5D2U9 266 aa8.87□□□□□ -0.99
PDLIM5-220ENST00000514830 AGRNO00468 2067 aa8.87□□□□□ -0.99
PDLIM5-220ENST00000514830 LOC102723971A0A1B0GUV8 181 aa8.86□□□□□ -0.99
PDLIM5-220ENST00000514830 A0A1B0GV50 99 aa8.86□□□□□ -0.99
PDLIM5-220ENST00000514830 FBLL1A6NHQ2 334 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-220ENST00000514830 DIRC3C9JPN6 131 aa8.86□□□□□ -0.99
PDLIM5-220ENST00000514830 UBE2G2P60604 165 aa8.86□□□□□ -0.99
PDLIM5-220ENST00000514830 MEF2BQ02080 365 aaPredicted RBP8.86□□□□□ -0.99
PDLIM5-220ENST00000514830 ZNF506Q5JVG8 444 aa8.86□□□□□ -0.99
PDLIM5-220ENST00000514830 EBLN2Q6P2I7 272 aa8.86□□□□□ -0.99
PDLIM5-220ENST00000514830 C9orf47Q6ZRZ4 202 aa8.86□□□□□ -0.99
PDLIM5-220ENST00000514830 OR8A1Q8NGG7 326 aa8.86□□□□□ -0.99
PDLIM5-220ENST00000514830 CMTM2Q8TAZ6 248 aa8.86□□□□□ -0.99
PDLIM5-220ENST00000514830 FAM210AQ96ND0 272 aa8.86□□□□□ -0.99
PDLIM5-220ENST00000514830 SMDT1Q9H4I9 107 aa8.86□□□□□ -0.99
PDLIM5-220ENST00000514830 MED9Q9NWA0 146 aa8.86□□□□□ -0.99
PDLIM5-220ENST00000514830 EPDR1Q9UM22 224 aa8.86□□□□□ -0.99
PDLIM5-220ENST00000514830 TRBV7-9A0A0J9YWB2 115 aa8.85□□□□□ -0.99
PDLIM5-220ENST00000514830 RBFOX3A6NFN3 312 aa8.85□□□□□ -0.99
PDLIM5-220ENST00000514830 ZNF705FA8MVS1 300 aaPredicted RBP8.85□□□□□ -0.99
PDLIM5-220ENST00000514830 C11orf94C9JXX5 98 aa8.85□□□□□ -0.99
PDLIM5-220ENST00000514830 NPIPB6E9PJ23 425 aa8.85□□□□□ -0.99
PDLIM5-220ENST00000514830 H3BMM0 161 aa8.85□□□□□ -0.99
PDLIM5-220ENST00000514830 PDE6DO43924 150 aa8.85□□□□□ -0.99
PDLIM5-220ENST00000514830 DUSP14O95147 198 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-220ENST00000514830 TCRAP04437 139 aa8.85□□□□□ -0.99
PDLIM5-220ENST00000514830 CST9LP1Q5W188 147 aa8.85□□□□□ -0.99
PDLIM5-220ENST00000514830 TRPT1Q86TN4 253 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-220ENST00000514830 APRG1Q8IVJ8 170 aa8.85□□□□□ -0.99
PDLIM5-220ENST00000514830 C11orf52Q96A22 123 aa8.85□□□□□ -0.99
PDLIM5-220ENST00000514830 ODF3Q96PU9 254 aa8.85□□□□□ -0.99
PDLIM5-220ENST00000514830 CITED4Q96RK1 184 aa8.85□□□□□ -0.99
PDLIM5-220ENST00000514830 ATG101Q9BSB4 218 aa8.85□□□□□ -0.99
PDLIM5-220ENST00000514830 PRAC2D3DTV9 90 aa8.84□□□□□ -0.99
PDLIM5-220ENST00000514830 F6UZH7 168 aa8.84□□□□□ -0.99
PDLIM5-220ENST00000514830 K7EQM0 130 aa8.84□□□□□ -0.99
PDLIM5-220ENST00000514830 ATP5G3P48201 142 aa8.84□□□□□ -0.99
PDLIM5-220ENST00000514830 GDF5OSQ5U4N7 250 aa8.84□□□□□ -0.99
PDLIM5-220ENST00000514830 LINC00322Q6ZN03 302 aaPredicted RBP8.84□□□□□ -0.99
PDLIM5-220ENST00000514830 DEFB125Q8N687 156 aa8.84□□□□□ -0.99
PDLIM5-220ENST00000514830 CYB561D1Q8N8Q1 229 aa8.84□□□□□ -0.99
PDLIM5-220ENST00000514830 OR10J6PQ8NGY7 276 aa8.84□□□□□ -0.99
PDLIM5-220ENST00000514830 LINC00477Q96M19 166 aa8.84□□□□□ -0.99
PDLIM5-220ENST00000514830 AURKAIP1Q9NWT8 199 aaPredicted RBP8.84□□□□□ -0.99
PDLIM5-220ENST00000514830 KLF12Q9Y4X4 402 aa8.84□□□□□ -0.99
PDLIM5-220ENST00000514830 LENEPQ9Y5L5 61 aa8.84□□□□□ -0.99
PDLIM5-220ENST00000514830 TRBV6-1A0A0K0K1D8 114 aa8.83□□□□□ -1
PDLIM5-220ENST00000514830 RAB19A4D1S5 217 aa8.83□□□□□ -1
PDLIM5-220ENST00000514830 TMEM250H0YL14 139 aa8.83□□□□□ -1
PDLIM5-220ENST00000514830 PEX7O00628 323 aa8.83□□□□□ -1
PDLIM5-220ENST00000514830 S100A9P06702 114 aaKnown RBP8.83□□□□□ -1
PDLIM5-220ENST00000514830 CNN1P51911 297 aaKnown RBP8.83□□□□□ -1
PDLIM5-220ENST00000514830 HAGHQ16775 308 aa8.83□□□□□ -1
PDLIM5-220ENST00000514830 ACTL10Q5JWF8 245 aa8.83□□□□□ -1
PDLIM5-220ENST00000514830 STHQ8IWL8 128 aa8.83□□□□□ -1
PDLIM5-220ENST00000514830 TMEM75Q8N9X5 138 aa8.83□□□□□ -1
PDLIM5-220ENST00000514830 PCNPQ8WW12 178 aaKnown RBP8.83□□□□□ -1
PDLIM5-220ENST00000514830 WFDC10AQ9H1F0 79 aa8.83□□□□□ -1
PDLIM5-220ENST00000514830 SRD5A3Q9H8P0 318 aa8.83□□□□□ -1
PDLIM5-220ENST00000514830 KIR2DL5BA0A0G2JN68 375 aa8.82□□□□□ -1
PDLIM5-220ENST00000514830 KIR2DL5BA0A0G2JPC4 375 aa8.82□□□□□ -1
PDLIM5-220ENST00000514830 KNCNA6PVL3 124 aa8.82□□□□□ -1
PDLIM5-220ENST00000514830 F6UB75 175 aa8.82□□□□□ -1
PDLIM5-220ENST00000514830 K7EIL1 84 aa8.82□□□□□ -1
PDLIM5-220ENST00000514830 IGLV2-11P01706 119 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms