RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 C11orf94C9JXX5 98 aa5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 VWC2Q2TAL6 325 aa5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 BCL6BQ8N143 479 aaPredicted RBP5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 LRRC29Q8WV35 223 aa5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 DCTN5Q9BTE1 182 aa5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 CUL9Q8IWT3 2517 aa5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 ICE1Q9Y2F5 2266 aa5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 IGKV1D-17A0A075B6S4 117 aa5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 TRAV8-1A0A0A6YYK1 113 aa5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 IGHV3-43A0A0B4J1X8 118 aa5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 PROP1O75360 226 aa5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 IGHV3-13P01766 116 aa5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 IGHV3-43DP0DP04 118 aa5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 ASIPP42127 132 aa5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 IGFL3Q6UXB1 125 aa5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 TEN1Q86WV5 123 aa5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 TEX45Q8NA69 505 aa5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 H1FXQ92522 213 aaKnown RBP5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 DLX4Q92988 240 aaPredicted RBP5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 SLC25A22Q9H936 323 aa5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 SAP30LQ9HAJ7 183 aa5.97□□□□□ -1.45
PDLIM5-219ENST00000514743 TRAV8-2A0A0B4J237 113 aa5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 DEFB108AA8MXU0 73 aa5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 MPDU1O75352 247 aa5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 NDUFB4O95168 129 aa5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 APOHP02749 345 aaPredicted RBP5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 AMY1AP04745 511 aa5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 RTL8BQ17RB0 113 aa5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 RFESDQ8TAC1 157 aa5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 C20orf173Q96LM9 149 aa5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 TMEM147Q9BVK8 224 aa5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 RBAKDNA6NC62 111 aa5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 SRRM5B3KS81 715 aa5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 K7EM74 188 aa5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 IGKV1D-33P01593 117 aa5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 IGKV1-33P01594 117 aa5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 CFAP126Q5VTH2 177 aa5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 Q6ZS92 163 aa5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 GOLT1AQ6ZVE7 132 aa5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 FAM90A1Q86YD7 464 aa5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 SLC25A10Q9UBX3 287 aaPredicted RBP5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 TIMM8BQ9Y5J9 83 aaPredicted RBP5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 EP300Q09472 2414 aaPredicted RBP5.96□□□□□ -1.46
PDLIM5-219ENST00000514743 TMSB15BA0A087X1C1 80 aa5.95□□□□□ -1.46
PDLIM5-219ENST00000514743 A8MWL6 223 aa5.95□□□□□ -1.46
PDLIM5-219ENST00000514743 A8MZ25 164 aa5.95□□□□□ -1.46
PDLIM5-219ENST00000514743 GHRHP01286 108 aa5.95□□□□□ -1.46
PDLIM5-219ENST00000514743 SMCPP49901 116 aaPredicted RBP5.95□□□□□ -1.46
PDLIM5-219ENST00000514743 ADORA2A-AS1P86434 159 aa5.95□□□□□ -1.46
PDLIM5-219ENST00000514743 C22orf34Q6ZV56 151 aa5.95□□□□□ -1.46
PDLIM5-219ENST00000514743 STHQ8IWL8 128 aa5.95□□□□□ -1.46
PDLIM5-219ENST00000514743 NPPCP23582 126 aa5.95□□□□□ -1.46
PDLIM5-219ENST00000514743 COL8A2P25067 703 aa5.95□□□□□ -1.46
PDLIM5-219ENST00000514743 TCF15Q12870 199 aa5.95□□□□□ -1.46
PDLIM5-219ENST00000514743 PMVKQ15126 192 aa5.95□□□□□ -1.46
PDLIM5-219ENST00000514743 CT83Q5H943 113 aa5.95□□□□□ -1.46
PDLIM5-219ENST00000514743 WIPF2Q8TF74 440 aaPredicted RBP5.95□□□□□ -1.46
PDLIM5-219ENST00000514743 GNB1P62873 340 aa5.95□□□□□ -1.46
PDLIM5-219ENST00000514743 C15orf53Q8NAA6 179 aa5.95□□□□□ -1.46
PDLIM5-219ENST00000514743 PHLDA1Q8WV24 401 aaPredicted RBP5.95□□□□□ -1.46
PDLIM5-219ENST00000514743 C2orf48Q96LS8 159 aa5.95□□□□□ -1.46
PDLIM5-219ENST00000514743 ADGRG4Q8IZF6 3080 aa5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 UQCRQO14949 82 aa5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 CLDN14O95500 239 aa5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 LHBP01229 141 aa5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 PFN2P35080 140 aa5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 LOXL3P58215 753 aa5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 HBG1P69891 147 aa5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 HBG2P69892 147 aa5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 FAM120AOSQ5T036 256 aa5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 C1orf229Q6ZS94 237 aaPredicted RBP5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 RPP25LQ8N5L8 163 aaKnown RBP5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 IGFBPL1Q8WX77 278 aa5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 TAF15Q92804 592 aaKnown RBP eCLIP5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 IGHV3OR15-7A0A075B7D8 119 aa5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 ZNF134P52741 427 aa5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 SERF2P84101 59 aa5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 TFF3Q07654 80 aa5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 KLRB1Q12918 225 aa5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 Q8N7P7 452 aa5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 SNRNP40Q96DI7 357 aaKnown RBP5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 PYGO1Q9Y3Y4 419 aa5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 CADP27708 2225 aa5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 DYSFO75923 2080 aa5.94□□□□□ -1.46
PDLIM5-219ENST00000514743 IGLV3-9A0A075B6K5 115 aa5.93□□□□□ -1.46
PDLIM5-219ENST00000514743 DUTP33316 252 aaKnown RBP5.93□□□□□ -1.46
PDLIM5-219ENST00000514743 ZNF331Q9NQX6 463 aaPredicted RBP5.93□□□□□ -1.46
PDLIM5-219ENST00000514743 M0R1B8 84 aa5.93□□□□□ -1.46
PDLIM5-219ENST00000514743 CD7P09564 240 aa5.93□□□□□ -1.46
PDLIM5-219ENST00000514743 CGB3P0DN86 165 aa5.93□□□□□ -1.46
PDLIM5-219ENST00000514743 CGB7P0DN87 165 aa5.93□□□□□ -1.46
PDLIM5-219ENST00000514743 ZNF672Q499Z4 452 aaPredicted RBP5.93□□□□□ -1.46
PDLIM5-219ENST00000514743 ZNRF1Q8ND25 227 aa5.93□□□□□ -1.46
PDLIM5-219ENST00000514743 PRSS33Q8NF86 280 aa5.93□□□□□ -1.46
PDLIM5-219ENST00000514743 RND1Q92730 232 aa5.93□□□□□ -1.46
PDLIM5-219ENST00000514743 TIMM9Q9Y5J7 89 aa5.93□□□□□ -1.46
PDLIM5-219ENST00000514743 CEP250Q9BV73 2442 aa5.93□□□□□ -1.46
PDLIM5-219ENST00000514743 ANKRD11Q6UB99 2663 aaPredicted RBP5.93□□□□□ -1.46
PDLIM5-219ENST00000514743 IGHV1-24A0A0C4DH33 117 aa5.93□□□□□ -1.46
PDLIM5-219ENST00000514743 J3QQQ9 107 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms