RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 ASCL5Q7RTU5 278 aa7.66□□□□□ -1.18
VCAN-210ENST00000513960 TNFRSF14Q92956 283 aa7.66□□□□□ -1.18
VCAN-210ENST00000513960 ZNF479Q96JC4 524 aa7.66□□□□□ -1.18
VCAN-210ENST00000513960 CHAC1Q9BUX1 264 aa7.66□□□□□ -1.18
VCAN-210ENST00000513960 OTORQ9NRC9 128 aa7.66□□□□□ -1.18
VCAN-210ENST00000513960 UFC1Q9Y3C8 167 aa7.66□□□□□ -1.18
VCAN-210ENST00000513960 APC2O95996 2303 aa7.66□□□□□ -1.18
VCAN-210ENST00000513960 GAGE12HA6NDE8 117 aa7.66□□□□□ -1.18
VCAN-210ENST00000513960 IGFL4Q6B9Z1 124 aa7.66□□□□□ -1.18
VCAN-210ENST00000513960 ZNF492Q9P255 531 aa7.66□□□□□ -1.18
VCAN-210ENST00000513960 CHTOPQ9Y3Y2 248 aaKnown RBP7.66□□□□□ -1.18
VCAN-210ENST00000513960 DMXL1Q9Y485 3027 aa7.66□□□□□ -1.18
VCAN-210ENST00000513960 IGKV1D-37A0A075B6S9 117 aa7.66□□□□□ -1.18
VCAN-210ENST00000513960 PSMB11A5LHX3 300 aa7.66□□□□□ -1.18
VCAN-210ENST00000513960 IL4P05112 153 aa7.66□□□□□ -1.18
VCAN-210ENST00000513960 THBDP07204 575 aa7.66□□□□□ -1.18
VCAN-210ENST00000513960 RAI1Q7Z5J4 1906 aaPredicted RBP7.65□□□□□ -1.18
VCAN-210ENST00000513960 CNTFRP26992 372 aa7.65□□□□□ -1.18
VCAN-210ENST00000513960 RAB9AP51151 201 aa7.65□□□□□ -1.18
VCAN-210ENST00000513960 CT83Q5H943 113 aa7.65□□□□□ -1.18
VCAN-210ENST00000513960 LYPD2Q6UXB3 125 aa7.65□□□□□ -1.18
VCAN-210ENST00000513960 Q8TAT8 98 aa7.65□□□□□ -1.18
VCAN-210ENST00000513960 RNASE6Q93091 150 aaKnown RBP7.65□□□□□ -1.18
VCAN-210ENST00000513960 SCNM1Q9BWG6 230 aa7.65□□□□□ -1.18
VCAN-210ENST00000513960 SLC25A39Q9BZJ4 359 aaPredicted RBP7.65□□□□□ -1.18
VCAN-210ENST00000513960 ZFHX4Q86UP3 3567 aa7.65□□□□□ -1.18
VCAN-210ENST00000513960 LOC107984156A0A0G2JMH3 177 aa7.65□□□□□ -1.18
VCAN-210ENST00000513960 C19orf71A6NCJ1 209 aa7.65□□□□□ -1.18
VCAN-210ENST00000513960 LGALS7P47929 136 aa7.65□□□□□ -1.18
VCAN-210ENST00000513960 ZC2HC1BQ5TFG8 222 aa7.65□□□□□ -1.18
VCAN-210ENST00000513960 UFSP1Q6NVU6 142 aa7.65□□□□□ -1.18
VCAN-210ENST00000513960 ARL17AQ8IVW1 177 aa7.65□□□□□ -1.18
VCAN-210ENST00000513960 PRSS33Q8NF86 280 aa7.65□□□□□ -1.18
VCAN-210ENST00000513960 RITA1Q96K30 269 aa7.65□□□□□ -1.18
VCAN-210ENST00000513960 GFRA4Q9GZZ7 299 aa7.65□□□□□ -1.18
VCAN-210ENST00000513960 TMEM133Q9H2Q1 129 aa7.65□□□□□ -1.18
VCAN-210ENST00000513960 FBXL15Q9H469 300 aa7.65□□□□□ -1.18
VCAN-210ENST00000513960 C7orf69Q9H7B7 122 aa7.65□□□□□ -1.18
VCAN-210ENST00000513960 NPYP01303 97 aa7.65□□□□□ -1.19
VCAN-210ENST00000513960 C8orf46Q8TAG6 207 aa7.65□□□□□ -1.19
VCAN-210ENST00000513960 MAP1LC3AQ9H492 121 aa7.65□□□□□ -1.19
VCAN-210ENST00000513960 HIF1ANQ9NWT6 349 aa7.65□□□□□ -1.19
VCAN-210ENST00000513960 INSIG2Q9Y5U4 225 aa7.65□□□□□ -1.19
VCAN-210ENST00000513960 DOPEY2Q9Y3R5 2298 aa7.65□□□□□ -1.19
VCAN-210ENST00000513960 CUL9Q8IWT3 2517 aa7.64□□□□□ -1.19
VCAN-210ENST00000513960 PIEZO2Q9H5I5 2752 aa7.64□□□□□ -1.19
VCAN-210ENST00000513960 IGKV2-40A0A087WW87 121 aaPredicted RBP7.64□□□□□ -1.19
VCAN-210ENST00000513960 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.64□□□□□ -1.19
VCAN-210ENST00000513960 NDUFA3O95167 84 aa7.64□□□□□ -1.19
VCAN-210ENST00000513960 IGKV2D-40P01614 121 aaPredicted RBP7.64□□□□□ -1.19
VCAN-210ENST00000513960 HES1Q14469 280 aa7.64□□□□□ -1.19
VCAN-210ENST00000513960 BOD1L2Q8IYS8 172 aa7.64□□□□□ -1.19
VCAN-210ENST00000513960 ZNF418Q8TF45 676 aaPredicted RBP7.64□□□□□ -1.19
VCAN-210ENST00000513960 MLST8Q9BVC4 326 aa7.64□□□□□ -1.19
VCAN-210ENST00000513960 PRSS22Q9GZN4 317 aa7.64□□□□□ -1.19
VCAN-210ENST00000513960 ZNF292O60281 2723 aa7.64□□□□□ -1.19
VCAN-210ENST00000513960 NPIPB5A8MRT5 1133 aa7.64□□□□□ -1.19
VCAN-210ENST00000513960 IGHV3-23P01764 117 aa7.64□□□□□ -1.19
VCAN-210ENST00000513960 BMI1P35226 326 aa7.64□□□□□ -1.19
VCAN-210ENST00000513960 ATP5G2Q06055 141 aa7.64□□□□□ -1.19
VCAN-210ENST00000513960 TMEM167AQ8TBQ9 72 aa7.64□□□□□ -1.19
VCAN-210ENST00000513960 RALYQ9UKM9 306 aaKnown RBP7.64□□□□□ -1.19
VCAN-210ENST00000513960 J3KRW8 73 aa7.64□□□□□ -1.19
VCAN-210ENST00000513960 MC5RP33032 325 aa7.64□□□□□ -1.19
VCAN-210ENST00000513960 MRPL51Q4U2R6 128 aaKnown RBP7.64□□□□□ -1.19
VCAN-210ENST00000513960 ANKRD11Q6UB99 2663 aaPredicted RBP7.63□□□□□ -1.19
VCAN-210ENST00000513960 CGB1A6NKQ9 187 aa7.63□□□□□ -1.19
VCAN-210ENST00000513960 NPIPB6E9PJ23 425 aa7.63□□□□□ -1.19
VCAN-210ENST00000513960 H3BVH4 76 aa7.63□□□□□ -1.19
VCAN-210ENST00000513960 GP9P14770 177 aa7.63□□□□□ -1.19
VCAN-210ENST00000513960 FOXC1Q12948 553 aa7.63□□□□□ -1.19
VCAN-210ENST00000513960 LGALS9BQ3B8N2 356 aa7.63□□□□□ -1.19
VCAN-210ENST00000513960 LGALS9CQ6DKI2 356 aa7.63□□□□□ -1.19
VCAN-210ENST00000513960 ATP6V0BQ99437 205 aa7.63□□□□□ -1.19
VCAN-210ENST00000513960 NDUFS7O75251 213 aa7.63□□□□□ -1.19
VCAN-210ENST00000513960 CEACAM3P40198 252 aa7.63□□□□□ -1.19
VCAN-210ENST00000513960 KLF17Q5JT82 389 aaPredicted RBP7.63□□□□□ -1.19
VCAN-210ENST00000513960 VGLL1Q99990 258 aa7.63□□□□□ -1.19
VCAN-210ENST00000513960 LINC00311Q8N616 119 aa7.63□□□□□ -1.19
VCAN-210ENST00000513960 TMEM75Q8N9X5 138 aa7.63□□□□□ -1.19
VCAN-210ENST00000513960 Q8NA96 180 aa7.63□□□□□ -1.19
VCAN-210ENST00000513960 KLF12Q9Y4X4 402 aa7.63□□□□□ -1.19
VCAN-210ENST00000513960 FGF6P10767 208 aa7.62□□□□□ -1.19
VCAN-210ENST00000513960 LOXP28300 417 aaPredicted RBP7.62□□□□□ -1.19
VCAN-210ENST00000513960 CD300EQ496F6 205 aaPredicted RBP7.62□□□□□ -1.19
VCAN-210ENST00000513960 CTSZQ9UBR2 303 aa7.62□□□□□ -1.19
VCAN-210ENST00000513960 IGKV2D-26A0A0A0MRZ7 120 aa7.62□□□□□ -1.19
VCAN-210ENST00000513960 E7EQL1 145 aa7.62□□□□□ -1.19
VCAN-210ENST00000513960 SH2D1AO60880 128 aa7.62□□□□□ -1.19
VCAN-210ENST00000513960 IGKCP01834 107 aa7.62□□□□□ -1.19
VCAN-210ENST00000513960 CD3EP07766 207 aa7.62□□□□□ -1.19
VCAN-210ENST00000513960 GAGE13Q4V321 117 aa7.62□□□□□ -1.19
VCAN-210ENST00000513960 FAM104BQ5XKR9 115 aa7.62□□□□□ -1.19
VCAN-210ENST00000513960 TRAV40A0A0B4J280 105 aa7.62□□□□□ -1.19
VCAN-210ENST00000513960 APOBEC3AP31941 199 aaPredicted RBP7.62□□□□□ -1.19
VCAN-210ENST00000513960 PRR30Q53SZ7 412 aaPredicted RBP7.62□□□□□ -1.19
VCAN-210ENST00000513960 SCGB1D4Q6XE38 83 aa7.62□□□□□ -1.19
VCAN-210ENST00000513960 NEGR1Q7Z3B1 354 aa7.62□□□□□ -1.19
VCAN-210ENST00000513960 TTC9CQ8N5M4 171 aa7.62□□□□□ -1.19
VCAN-210ENST00000513960 DEFB104AQ8WTQ1 72 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 1451.7 ms