RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 FOXL1Q12952 345 aa7.55□□□□□ -1.2
TPM3-221ENST00000513769 KLF5Q13887 457 aaPredicted RBP7.55□□□□□ -1.2
TPM3-221ENST00000513769 RNF212Q495C1 297 aa7.55□□□□□ -1.2
TPM3-221ENST00000513769 SIGLEC15Q6ZMC9 328 aa7.55□□□□□ -1.2
TPM3-221ENST00000513769 LINC01006Q8NI28 216 aa7.55□□□□□ -1.2
TPM3-221ENST00000513769 C4orf3Q8WVX3 66 aa7.55□□□□□ -1.2
TPM3-221ENST00000513769 C20orf24Q9BUV8 137 aa7.55□□□□□ -1.2
TPM3-221ENST00000513769 KRTAP4-7Q9BYR0 210 aa7.55□□□□□ -1.2
TPM3-221ENST00000513769 ZNF331Q9NQX6 463 aaPredicted RBP7.55□□□□□ -1.2
TPM3-221ENST00000513769 PPP1R14DQ9NXH3 145 aa7.55□□□□□ -1.2
TPM3-221ENST00000513769 MLXQ9UH92 298 aa7.55□□□□□ -1.2
TPM3-221ENST00000513769 IGHV3-35A0A0C4DH35 117 aa7.54□□□□□ -1.2
TPM3-221ENST00000513769 A8MWP6 167 aa7.54□□□□□ -1.2
TPM3-221ENST00000513769 DIRC3C9JPN6 131 aa7.54□□□□□ -1.2
TPM3-221ENST00000513769 ISLRO14498 428 aa7.54□□□□□ -1.2
TPM3-221ENST00000513769 AKR1C3P42330 323 aa7.54□□□□□ -1.2
TPM3-221ENST00000513769 UBE2G1P62253 170 aa7.54□□□□□ -1.2
TPM3-221ENST00000513769 TMEM95Q3KNT9 176 aa7.54□□□□□ -1.2
TPM3-221ENST00000513769 SAPCD1Q5SSQ6 148 aa7.54□□□□□ -1.2
TPM3-221ENST00000513769 BAGE2Q86Y30 109 aa7.54□□□□□ -1.2
TPM3-221ENST00000513769 C1QL4Q86Z23 238 aa7.54□□□□□ -1.2
TPM3-221ENST00000513769 TMEM75Q8N9X5 138 aa7.54□□□□□ -1.2
TPM3-221ENST00000513769 GLMPQ8WWB7 406 aa7.54□□□□□ -1.2
TPM3-221ENST00000513769 DPF1Q92782 380 aa7.54□□□□□ -1.2
TPM3-221ENST00000513769 ISOC2Q96AB3 205 aa7.54□□□□□ -1.2
TPM3-221ENST00000513769 DUX5Q96PT3 197 aa7.54□□□□□ -1.2
TPM3-221ENST00000513769 MLST8Q9BVC4 326 aa7.54□□□□□ -1.2
TPM3-221ENST00000513769 OSTCQ9NRP0 149 aa7.54□□□□□ -1.2
TPM3-221ENST00000513769 FBN1P35555 2871 aaKnown RBP7.54□□□□□ -1.2
TPM3-221ENST00000513769 SVEP1Q4LDE5 3571 aa7.54□□□□□ -1.2
TPM3-221ENST00000513769 LINC01619G3V211 115 aa7.53□□□□□ -1.2
TPM3-221ENST00000513769 CHEK1O14757 476 aa7.53□□□□□ -1.2
TPM3-221ENST00000513769 TRBV12-3P01733 135 aa7.53□□□□□ -1.2
TPM3-221ENST00000513769 RPL19P84098 196 aaKnown RBP7.53□□□□□ -1.2
TPM3-221ENST00000513769 ADIRFQ15847 76 aa7.53□□□□□ -1.2
TPM3-221ENST00000513769 LCN12Q6JVE5 192 aa7.53□□□□□ -1.2
TPM3-221ENST00000513769 UNQ9165/PRO28630Q6UXU0 137 aa7.53□□□□□ -1.2
TPM3-221ENST00000513769 FAM231DQ6ZW35 169 aa7.53□□□□□ -1.2
TPM3-221ENST00000513769 COX8CQ7Z4L0 72 aa7.53□□□□□ -1.2
TPM3-221ENST00000513769 SFRP2Q96HF1 295 aa7.53□□□□□ -1.2
TPM3-221ENST00000513769 C17orf77Q96MU5 243 aa7.53□□□□□ -1.2
TPM3-221ENST00000513769 RHPN1-AS1Q9BWJ2 59 aa7.53□□□□□ -1.2
TPM3-221ENST00000513769 PEMTQ9UBM1 199 aa7.53□□□□□ -1.2
TPM3-221ENST00000513769 TSSC4Q9Y5U2 329 aaPredicted RBP7.53□□□□□ -1.2
TPM3-221ENST00000513769 TLN2Q9Y4G6 2542 aa7.52□□□□□ -1.21
TPM3-221ENST00000513769 TRBV20OR9-2A0A075B6H5 130 aa7.52□□□□□ -1.21
TPM3-221ENST00000513769 TRAV9-1A0A075B6T8 112 aa7.52□□□□□ -1.21
TPM3-221ENST00000513769 COLCA2A8K830 154 aa7.52□□□□□ -1.21
TPM3-221ENST00000513769 SCO1O75880 301 aa7.52□□□□□ -1.21
TPM3-221ENST00000513769 LTAP01374 205 aa7.52□□□□□ -1.21
TPM3-221ENST00000513769 APOHP02749 345 aaPredicted RBP7.52□□□□□ -1.21
TPM3-221ENST00000513769 S100PP25815 95 aa7.52□□□□□ -1.21
TPM3-221ENST00000513769 PSG3Q16557 428 aa7.52□□□□□ -1.21
TPM3-221ENST00000513769 LCE4AQ5TA78 99 aa7.52□□□□□ -1.21
TPM3-221ENST00000513769 C10orf99Q6UWK7 81 aa7.52□□□□□ -1.21
TPM3-221ENST00000513769 TMEM183AQ8IXX5 376 aa7.52□□□□□ -1.21
TPM3-221ENST00000513769 EXOC3-AS1Q8N2X6 119 aa7.52□□□□□ -1.21
TPM3-221ENST00000513769 OR10G8Q8NGN5 311 aa7.52□□□□□ -1.21
TPM3-221ENST00000513769 OR1N2Q8NGR9 330 aa7.52□□□□□ -1.21
TPM3-221ENST00000513769 TMEM158Q8WZ71 300 aa7.52□□□□□ -1.21
TPM3-221ENST00000513769 IGF2BP2-AS1Q96M15 143 aa7.52□□□□□ -1.21
TPM3-221ENST00000513769 OR5B12Q96R08 314 aa7.52□□□□□ -1.21
TPM3-221ENST00000513769 DERL1Q9BUN8 251 aa7.52□□□□□ -1.21
TPM3-221ENST00000513769 ATRQ13535 2644 aa7.52□□□□□ -1.21
TPM3-221ENST00000513769 H7BYZ3 331 aa7.51□□□□□ -1.21
TPM3-221ENST00000513769 M0QZ24 198 aa7.51□□□□□ -1.21
TPM3-221ENST00000513769 IGLV2-8P01709 118 aa7.51□□□□□ -1.21
TPM3-221ENST00000513769 PFN1P07737 140 aaKnown RBP7.51□□□□□ -1.21
TPM3-221ENST00000513769 CBLN1P23435 193 aa7.51□□□□□ -1.21
TPM3-221ENST00000513769 ID1P41134 155 aa7.51□□□□□ -1.21
TPM3-221ENST00000513769 PAFAH1B2P68402 229 aa7.51□□□□□ -1.21
TPM3-221ENST00000513769 FLI1Q01543 452 aaPredicted RBP7.51□□□□□ -1.21
TPM3-221ENST00000513769 TM4SF20Q53R12 229 aa7.51□□□□□ -1.21
TPM3-221ENST00000513769 CENPWQ5EE01 88 aa7.51□□□□□ -1.21
TPM3-221ENST00000513769 TCTEX1D4Q5JR98 221 aa7.51□□□□□ -1.21
TPM3-221ENST00000513769 KCNIP4Q6PIL6 250 aa7.51□□□□□ -1.21
TPM3-221ENST00000513769 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.51□□□□□ -1.21
TPM3-221ENST00000513769 LCNL1Q6ZST4 164 aa7.51□□□□□ -1.21
TPM3-221ENST00000513769 OR11H1Q8NG94 326 aa7.51□□□□□ -1.21
TPM3-221ENST00000513769 LINC00477Q96M19 166 aa7.51□□□□□ -1.21
TPM3-221ENST00000513769 NRN1Q9NPD7 142 aa7.51□□□□□ -1.21
TPM3-221ENST00000513769 SIGLEC8Q9NYZ4 499 aa7.51□□□□□ -1.21
TPM3-221ENST00000513769 LENEPQ9Y5L5 61 aa7.51□□□□□ -1.21
TPM3-221ENST00000513769 STAB1Q9NY15 2570 aa7.51□□□□□ -1.21
TPM3-221ENST00000513769 MXRA5Q9NR99 2828 aa7.5□□□□□ -1.21
TPM3-221ENST00000513769 ZANQ9Y493 2812 aa7.5□□□□□ -1.21
TPM3-221ENST00000513769 TRBV24-1A0A075B6N3 115 aa7.5□□□□□ -1.21
TPM3-221ENST00000513769 TRAV2A0A0B4J234 112 aa7.5□□□□□ -1.21
TPM3-221ENST00000513769 TRBV7-9A0A0J9YWB2 115 aa7.5□□□□□ -1.21
TPM3-221ENST00000513769 FAM231BA6NCW3 169 aa7.5□□□□□ -1.21
TPM3-221ENST00000513769 OVOL1O14753 267 aa7.5□□□□□ -1.21
TPM3-221ENST00000513769 IGLV2-11P01706 119 aa7.5□□□□□ -1.21
TPM3-221ENST00000513769 HOXD3P31249 432 aaPredicted RBP7.5□□□□□ -1.21
TPM3-221ENST00000513769 PROK1P58294 105 aa7.5□□□□□ -1.21
TPM3-221ENST00000513769 ERVFC1-1P60608 527 aa7.5□□□□□ -1.21
TPM3-221ENST00000513769 TMEM88Q6PEY1 159 aa7.5□□□□□ -1.21
TPM3-221ENST00000513769 C9orf47Q6ZRZ4 202 aa7.5□□□□□ -1.21
TPM3-221ENST00000513769 LINC00479Q96M42 142 aa7.5□□□□□ -1.21
TPM3-221ENST00000513769 PYGO2Q9BRQ0 406 aa7.5□□□□□ -1.21
TPM3-221ENST00000513769 ZNF492Q9P255 531 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms