RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 GAMTQ14353 236 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 TIGITQ495A1 244 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 IDNKQ5T6J7 187 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 AADACL3Q5VUY0 350 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 OR8G2PQ6IF36 304 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 DHRS11Q6UWP2 260 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 ZNF818PQ6ZRF7 136 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 NEGR1Q7Z3B1 354 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 COX8CQ7Z4L0 72 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 HSD17B11Q8NBQ5 300 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 BPIFB6Q8NFQ5 453 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 OR11H7Q8NGC8 314 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 OR10G7Q8NGN6 311 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 OR52E5Q8NH55 327 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 CIRBP-AS1Q8TBR5 109 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 ZNF486Q96H40 463 aaPredicted RBP2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 SEC22AQ96IW7 307 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 LINC00467Q9BRT7 94 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 ALKBH7Q9BT30 221 aaPredicted RBP2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 FAM107BQ9H098 131 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 NOP10Q9NPE3 64 aaKnown RBP2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 NSG2Q9Y328 171 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 AK6Q9Y3D8 172 aaKnown RBP2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 STRAPQ9Y3F4 350 aaKnown RBP2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 ICOSQ9Y6W8 199 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 V9GY05 133 aa2.38□□□□□ -2.03
PDLIM5-218ENST00000513341 A0A087WZ39 114 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 PNMA8CA0A1B0GUJ8 204 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 A8MU10 97 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 F6UB75 175 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 PDCD5O14737 125 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 MYL12BO14950 172 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 PGLYRP1O75594 196 aaPredicted RBP2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 CRYGDP07320 174 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 RNASE2P10153 161 aaKnown RBP2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 ELK1P19419 428 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 PSMA1P25786 263 aaKnown RBP2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 OPRK1P41145 380 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 HTR2BP41595 481 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 CLDN12P56749 244 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 OR10A3P58181 314 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 DEFB1P60022 68 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 RPL37AP61513 92 aaKnown RBP2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 SUPT4H1P63272 117 aaKnown RBP2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 CTAG1AP78358 180 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 INSL4Q14641 139 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 SPINK13Q1W4C9 94 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 BSXQ3C1V8 233 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 LELP1Q5T871 98 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 STEAP1BQ6NZ63 245 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 LPCAT3Q6P1A2 487 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 PRSS54Q6PEW0 395 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 Q6ZRP5 223 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 H2BFWTQ7Z2G1 175 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 CROCCP3Q8IVE0 287 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 LINC00469Q8N7U9 141 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 ZNF555Q8NEP9 628 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 BEST4Q8NFU0 473 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 OR51G1Q8NGK1 321 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 OR4D5Q8NGN0 318 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 OR51H1Q8NH63 302 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 RNASEH2CQ8TDP1 164 aaKnown RBP2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 C2orf48Q96LS8 159 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 DPH3P1Q9H4G8 78 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 MRPL36Q9P0J6 103 aaKnown RBP2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 PRO0255Q9UI72 69 aa2.37□□□□□ -2.03
PDLIM5-218ENST00000513341 A0A0U1RRA0 63 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 IFITM5A6NNB3 132 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 E5RGE8 158 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 K7EQD1 137 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 M0R2Z0 102 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 GPR31O00270 319 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 ATG12O94817 140 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 CFDP00746 253 aaPredicted RBP2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 FABP1P07148 127 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 HTN1P15515 57 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 S100GP29377 79 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 OR10J1P30954 320 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 S100A7P31151 101 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 S100A5P33763 92 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 CDKN1BP46527 198 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 GALR1P47211 349 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 ATP5IP56385 69 aaPredicted RBP2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 GNG2P59768 71 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 GNGT1P63211 74 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 PSG3Q16557 428 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 HES5Q5TA89 166 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 TMEM91Q6ZNR0 172 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 C10orf67Q8IYJ2 551 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 OR8I2Q8N0Y5 310 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 TMEM37Q8WXS4 190 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 GPR146Q96CH1 333 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 MRPL53Q96EL3 112 aaKnown RBP2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 LINC01600Q96MT4 127 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 GPR82Q96P67 336 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 PDCD10Q9BUL8 212 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 C9orf16Q9BUW7 83 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 MND1Q9BWT6 205 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 MRPL32Q9BYC8 188 aaKnown RBP2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 ATG5Q9H1Y0 275 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms