RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 SSSCA1O60232 199 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 ADAP1O75689 374 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 CXCL2P19875 107 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 CXCL3P19876 107 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 CCL18P55774 89 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 TAS2R60P59551 318 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 POLR2GP62487 172 aaKnown RBP eCLIP5.05□□□□□ -1.6
USP46-208ENST00000512656 CLINT1Q14677 625 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 CT83Q5H943 113 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 TMEM182Q6ZP80 229 aaPredicted RBP5.05□□□□□ -1.6
USP46-208ENST00000512656 ZNF493Q6ZR52 646 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 CCDC190Q86UF4 302 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 BAP18Q8IXM2 172 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 OR10P1Q8NGE3 313 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 OR10J6PQ8NGY7 276 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 RPUSD4Q96CM3 377 aaKnown RBP5.05□□□□□ -1.6
USP46-208ENST00000512656 C16orf74Q96GX8 76 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 SMIM8Q96KF7 97 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 ARL6Q9H0F7 186 aa5.05□□□□□ -1.6
USP46-208ENST00000512656 TIMM8BQ9Y5J9 83 aaPredicted RBP5.05□□□□□ -1.6
USP46-208ENST00000512656 TRAV12-2A0A075B6T6 113 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 NBDYA0A0U1RRE5 68 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 CENPXA8MT69 81 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 H7BYZ3 331 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 TSC22D2O75157 780 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 METTL15P1P0C7V9 234 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 HTN1P15515 57 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 CDKN1BP46527 198 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 TAS2R30P59541 319 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 RRAS2P62070 204 aaPredicted RBP5.04□□□□□ -1.6
USP46-208ENST00000512656 CNPY1Q3B7I2 92 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 C4orf46Q504U0 113 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 TRIQKQ629K1 86 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 LCN15Q6UWW0 184 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 TMEM14EPQ6UXP3 125 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 ZNF546Q86UE3 836 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 BPIFA4PQ86YQ2 179 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 CCDC28AQ8IWP9 274 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 C6orf223Q8N319 242 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 UHRF2Q96PU4 802 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 C20orf144Q9BQM9 153 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 SLC50A1Q9BRV3 221 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 GGACTQ9BVM4 153 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 ARV1Q9H2C2 271 aa5.04□□□□□ -1.6
USP46-208ENST00000512656 PLAC8L1A1L4L8 177 aa5.03□□□□□ -1.6
USP46-208ENST00000512656 PMS2P5A8MQ11 134 aa5.03□□□□□ -1.6
USP46-208ENST00000512656 COX7A2P2O60397 106 aa5.03□□□□□ -1.6
USP46-208ENST00000512656 NDUFB6O95139 128 aa5.03□□□□□ -1.6
USP46-208ENST00000512656 SCGB1D2O95969 90 aa5.03□□□□□ -1.6
USP46-208ENST00000512656 PRM2P04554 102 aa5.03□□□□□ -1.6
USP46-208ENST00000512656 OR4E1P0C645 316 aa5.03□□□□□ -1.6
USP46-208ENST00000512656 AZU1P20160 251 aa5.03□□□□□ -1.6
USP46-208ENST00000512656 RAB31Q13636 194 aa5.03□□□□□ -1.6
USP46-208ENST00000512656 IAH1Q2TAA2 248 aaPredicted RBP5.03□□□□□ -1.6
USP46-208ENST00000512656 LINC00305Q7Z4B0 112 aa5.03□□□□□ -1.6
USP46-208ENST00000512656 TMEM263Q8WUH6 116 aaKnown RBP5.03□□□□□ -1.6
USP46-208ENST00000512656 GSKIPQ9P0R6 139 aa5.03□□□□□ -1.6
USP46-208ENST00000512656 PXMP4Q9Y6I8 212 aa5.03□□□□□ -1.6
USP46-208ENST00000512656 C16orf90A8MZG2 172 aa5.02□□□□□ -1.61
USP46-208ENST00000512656 L7N2F9 121 aa5.02□□□□□ -1.61
USP46-208ENST00000512656 AGPAT2O15120 278 aa5.02□□□□□ -1.61
USP46-208ENST00000512656 GCSHP23434 173 aa5.02□□□□□ -1.61
USP46-208ENST00000512656 VAMP2P63027 116 aa5.02□□□□□ -1.61
USP46-208ENST00000512656 SLC38A11Q08AI6 406 aa5.02□□□□□ -1.61
USP46-208ENST00000512656 ZNF846Q147U1 533 aa5.02□□□□□ -1.61
USP46-208ENST00000512656 FCN2Q15485 313 aa5.02□□□□□ -1.61
USP46-208ENST00000512656 TTC32Q5I0X7 151 aa5.02□□□□□ -1.61
USP46-208ENST00000512656 PATE2Q6UY27 113 aa5.02□□□□□ -1.61
USP46-208ENST00000512656 Q6ZRG5 221 aa5.02□□□□□ -1.61
USP46-208ENST00000512656 ZBTB8BQ8NAP8 495 aaPredicted RBP5.02□□□□□ -1.61
USP46-208ENST00000512656 CLRN3Q8NCR9 226 aa5.02□□□□□ -1.61
USP46-208ENST00000512656 ZNRF2Q8NHG8 242 aa5.02□□□□□ -1.61
USP46-208ENST00000512656 GNPNAT1Q96EK6 184 aaPredicted RBP5.02□□□□□ -1.61
USP46-208ENST00000512656 SRRQ9GZT4 340 aa5.02□□□□□ -1.61
USP46-208ENST00000512656 NOP10Q9NPE3 64 aaKnown RBP5.02□□□□□ -1.61
USP46-208ENST00000512656 ZNF331Q9NQX6 463 aaPredicted RBP5.02□□□□□ -1.61
USP46-208ENST00000512656 FLVCR2Q9UPI3 526 aa5.02□□□□□ -1.61
USP46-208ENST00000512656 ABCA13Q86UQ4 5058 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 NACAE9PAV3 2078 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 SNURFLB1AK76 121 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 ZNF701M0R085 212 aaPredicted RBP5.01□□□□□ -1.61
USP46-208ENST00000512656 MRPS12O15235 138 aaKnown RBP5.01□□□□□ -1.61
USP46-208ENST00000512656 CCNKO75909 580 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 CDK2AP2O75956 126 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 RLN2P04090 185 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 M6PRP20645 277 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 LEPP41159 167 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 CAMLGP49069 296 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 OR5I1Q13606 314 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 GUK1Q16774 197 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 C10orf113Q5VZT2 155 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 Q6ZNX1 250 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 SSX7Q7RTT5 188 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 C12orf45Q8N5I9 185 aaPredicted RBP5.01□□□□□ -1.61
USP46-208ENST00000512656 OR1L4Q8NGR5 311 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 RNASE8Q8TDE3 154 aaKnown RBP5.01□□□□□ -1.61
USP46-208ENST00000512656 RXFP4Q8TDU9 374 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 MITD1Q8WV92 249 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 ODF3Q96PU9 254 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 PFDN5Q99471 154 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms