RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, human

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD1-208	ENST00000512392	PEBP1	P30086	187 aa	Known RBP	4.13	□□□□□ -1.75
CHD1-208	ENST00000512392	NOV	P48745	357 aa		4.13	□□□□□ -1.75
CHD1-208	ENST00000512392		Q6ZTC4	211 aa		4.13	□□□□□ -1.75
CHD1-208	ENST00000512392		Q8NDZ9	215 aa		4.13	□□□□□ -1.75
CHD1-208	ENST00000512392	RHOXF1	Q8NHV9	184 aa		4.13	□□□□□ -1.75
CHD1-208	ENST00000512392	TNFRSF19	Q9NS68	423 aa		4.13	□□□□□ -1.75
CHD1-208	ENST00000512392	ABCC5	O15440	1437 aa		4.12	□□□□□ -1.75
CHD1-208	ENST00000512392	FUT5	Q11128	374 aa		4.12	□□□□□ -1.75
CHD1-208	ENST00000512392	TYMSOS	Q8TAI1	123 aa		4.12	□□□□□ -1.75
CHD1-208	ENST00000512392	HYLS1	Q96M11	299 aa		4.12	□□□□□ -1.75
CHD1-208	ENST00000512392	RTEL1-TNFRSF6B	F6WH68	1400 aa		4.12	□□□□□ -1.75
CHD1-208	ENST00000512392	FYCO1	Q9BQS8	1478 aa		4.12	□□□□□ -1.75
CHD1-208	ENST00000512392	ARAP2	Q8WZ64	1704 aa		4.12	□□□□□ -1.75
CHD1-208	ENST00000512392	ABCA3	Q99758	1704 aa		4.11	□□□□□ -1.75
CHD1-208	ENST00000512392	POLA1	P09884	1462 aa	Predicted RBP	4.11	□□□□□ -1.75
CHD1-208	ENST00000512392	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.11	□□□□□ -1.75
CHD1-208	ENST00000512392		G3V3Q6	166 aa		4.11	□□□□□ -1.75
CHD1-208	ENST00000512392	SLC25A6	P12236	298 aa		4.11	□□□□□ -1.75
CHD1-208	ENST00000512392	RPS10	P46783	165 aa	Known RBP	4.11	□□□□□ -1.75
CHD1-208	ENST00000512392	FGF13	Q92913	245 aa		4.11	□□□□□ -1.75
CHD1-208	ENST00000512392	ZNF355P	Q9NSJ1	428 aa		4.11	□□□□□ -1.75
CHD1-208	ENST00000512392	TAS2R4	Q9NYW5	299 aa		4.11	□□□□□ -1.75
CHD1-208	ENST00000512392	ROBO1	Q9Y6N7	1651 aa		4.11	□□□□□ -1.75
CHD1-208	ENST00000512392		A0A1W2PQD3	144 aa		4.11	□□□□□ -1.75
CHD1-208	ENST00000512392	C17orf98	A8MV24	154 aa		4.11	□□□□□ -1.75
CHD1-208	ENST00000512392	HYPM	O75409	117 aa		4.11	□□□□□ -1.75
CHD1-208	ENST00000512392	CRIP2	P52943	208 aa	Predicted RBP	4.11	□□□□□ -1.75
CHD1-208	ENST00000512392	MRPS36	P82909	103 aa	Known RBP	4.11	□□□□□ -1.75
CHD1-208	ENST00000512392	DEFA5	Q01523	94 aa		4.11	□□□□□ -1.75
CHD1-208	ENST00000512392		Q8IYB0	196 aa		4.11	□□□□□ -1.75
CHD1-208	ENST00000512392	POM121L12	Q8N7R1	296 aa		4.11	□□□□□ -1.75
CHD1-208	ENST00000512392	HELZ	P42694	1942 aa	Known RBP	4.1	□□□□□ -1.75
CHD1-208	ENST00000512392	AHDC1	Q5TGY3	1603 aa	Predicted RBP	4.1	□□□□□ -1.75
CHD1-208	ENST00000512392	CCDC180	Q9P1Z9	1646 aa		4.1	□□□□□ -1.75
CHD1-208	ENST00000512392	IGHV3-73	A0A0B4J1V6	119 aa		4.1	□□□□□ -1.75
CHD1-208	ENST00000512392	FAM24A	A6NFZ4	105 aa		4.1	□□□□□ -1.75
CHD1-208	ENST00000512392	UBL3	O95164	117 aa		4.1	□□□□□ -1.75
CHD1-208	ENST00000512392	ZNF705B	P0CI00	300 aa	Predicted RBP	4.1	□□□□□ -1.75
CHD1-208	ENST00000512392	ZNF22	P17026	224 aa	Predicted RBP	4.1	□□□□□ -1.75
CHD1-208	ENST00000512392	LINC00301	Q8NCQ3	95 aa		4.1	□□□□□ -1.75
CHD1-208	ENST00000512392	DPH3P1	Q9H4G8	78 aa		4.1	□□□□□ -1.75
CHD1-208	ENST00000512392	ZNF407	Q9C0G0	2248 aa		4.1	□□□□□ -1.75
CHD1-208	ENST00000512392	ABCC3	O15438	1527 aa		4.1	□□□□□ -1.75
CHD1-208	ENST00000512392	MYH13	Q9UKX3	1938 aa		4.1	□□□□□ -1.75
CHD1-208	ENST00000512392	ZSWIM8	A7E2V4	1837 aa		4.1	□□□□□ -1.75
CHD1-208	ENST00000512392	IGLV3-12	A0A075B6K2	115 aa		4.09	□□□□□ -1.75
CHD1-208	ENST00000512392	ZNF736	B4DX44	427 aa	Predicted RBP	4.09	□□□□□ -1.75
CHD1-208	ENST00000512392	GNGT2	O14610	69 aa		4.09	□□□□□ -1.75
CHD1-208	ENST00000512392	GNRH2	O43555	120 aa		4.09	□□□□□ -1.75
CHD1-208	ENST00000512392	SNCG	O76070	127 aa		4.09	□□□□□ -1.75
CHD1-208	ENST00000512392	T-ENOL	P0DO92	83 aa		4.09	□□□□□ -1.75
CHD1-208	ENST00000512392	COX7C	P15954	63 aa		4.09	□□□□□ -1.75
CHD1-208	ENST00000512392	CKS2	P33552	79 aa		4.09	□□□□□ -1.75
CHD1-208	ENST00000512392	XCL1	P47992	114 aa		4.09	□□□□□ -1.75
CHD1-208	ENST00000512392	LSM3	P62310	102 aa	Known RBP	4.09	□□□□□ -1.75
CHD1-208	ENST00000512392	INSL4	Q14641	139 aa		4.09	□□□□□ -1.75
CHD1-208	ENST00000512392	POP5	Q969H6	163 aa	Known RBP	4.09	□□□□□ -1.75
CHD1-208	ENST00000512392	TPRKB	Q9Y3C4	175 aa		4.09	□□□□□ -1.75
CHD1-208	ENST00000512392	CASKIN1	Q8WXD9	1431 aa		4.09	□□□□□ -1.75
CHD1-208	ENST00000512392	IGHV3-15	A0A0B4J1V0	119 aa		4.09	□□□□□ -1.76
CHD1-208	ENST00000512392		H7C423	109 aa		4.09	□□□□□ -1.76
CHD1-208	ENST00000512392	PDCD5	O14737	125 aa		4.09	□□□□□ -1.76
CHD1-208	ENST00000512392	CGA	P01215	116 aa		4.09	□□□□□ -1.76
CHD1-208	ENST00000512392	LCE1A	Q5T7P2	110 aa		4.09	□□□□□ -1.76
CHD1-208	ENST00000512392	MUC7	Q8TAX7	377 aa		4.09	□□□□□ -1.76
CHD1-208	ENST00000512392	ADGRB3	O60242	1522 aa		4.09	□□□□□ -1.76
CHD1-208	ENST00000512392	SCN8A	Q9UQD0	1980 aa		4.08	□□□□□ -1.76
CHD1-208	ENST00000512392	KIF26A	Q9ULI4	1882 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD1-208	ENST00000512392	MYO5A	Q9Y4I1	1855 aa	Known RBP	4.08	□□□□□ -1.76
CHD1-208	ENST00000512392	IGKV2D-30	A0A075B6S6	120 aa		4.08	□□□□□ -1.76
CHD1-208	ENST00000512392	IGKV2D-26	A0A0A0MRZ7	120 aa		4.08	□□□□□ -1.76
CHD1-208	ENST00000512392		K7EM74	188 aa		4.08	□□□□□ -1.76
CHD1-208	ENST00000512392	SDCBP	O00560	298 aa	Predicted RBP	4.08	□□□□□ -1.76
CHD1-208	ENST00000512392	IGLV1-51	P01701	117 aa		4.08	□□□□□ -1.76
CHD1-208	ENST00000512392	COX6A1	P12074	109 aa		4.08	□□□□□ -1.76
CHD1-208	ENST00000512392	LYZL1	Q6UWQ5	148 aa		4.08	□□□□□ -1.76
CHD1-208	ENST00000512392		Q6ZR03	302 aa		4.08	□□□□□ -1.76
CHD1-208	ENST00000512392	LYZL2	Q7Z4W2	148 aa		4.08	□□□□□ -1.76
CHD1-208	ENST00000512392	TSKU	Q8WUA8	353 aa		4.08	□□□□□ -1.76
CHD1-208	ENST00000512392	TMEM14A	Q9Y6G1	99 aa		4.08	□□□□□ -1.76
CHD1-208	ENST00000512392	UACA	Q9BZF9	1416 aa		4.08	□□□□□ -1.76
CHD1-208	ENST00000512392	FAM168B	A1KXE4	195 aa		4.07	□□□□□ -1.76
CHD1-208	ENST00000512392	LHB	P01229	141 aa		4.07	□□□□□ -1.76
CHD1-208	ENST00000512392	SBSPON	Q8IVN8	264 aa		4.07	□□□□□ -1.76
CHD1-208	ENST00000512392		Q8N814	137 aa		4.07	□□□□□ -1.76
CHD1-208	ENST00000512392	OR2T35	Q8NGX2	323 aa		4.07	□□□□□ -1.76
CHD1-208	ENST00000512392	C20orf78	Q9BR46	151 aa		4.07	□□□□□ -1.76
CHD1-208	ENST00000512392	ANAPC1	Q9H1A4	1944 aa		4.07	□□□□□ -1.76
CHD1-208	ENST00000512392	ARID1A	O14497	2285 aa		4.07	□□□□□ -1.76
CHD1-208	ENST00000512392	HCFC1	P51610	2035 aa		4.07	□□□□□ -1.76
CHD1-208	ENST00000512392	IGLC7	A0M8Q6	106 aa		4.07	□□□□□ -1.76
CHD1-208	ENST00000512392	LINC01565	O15544	149 aa		4.07	□□□□□ -1.76
CHD1-208	ENST00000512392	CLPS	P04118	112 aa		4.07	□□□□□ -1.76
CHD1-208	ENST00000512392	IL5	P05113	134 aa		4.07	□□□□□ -1.76
CHD1-208	ENST00000512392	SAA1	P0DJI8	122 aa	Predicted RBP	4.07	□□□□□ -1.76
CHD1-208	ENST00000512392	DPPA3	Q6W0C5	159 aa		4.07	□□□□□ -1.76
CHD1-208	ENST00000512392	ATP11AUN	Q6ZP68	121 aa		4.07	□□□□□ -1.76
CHD1-208	ENST00000512392	TSLP	Q969D9	159 aa		4.07	□□□□□ -1.76
CHD1-208	ENST00000512392	SMDT1	Q9H4I9	107 aa		4.07	□□□□□ -1.76
CHD1-208	ENST00000512392	TMEM242	Q9NWH2	141 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms