RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 CXCL2P19875 107 aa12.71□□□□□ -0.37
HMGCS1-206ENST00000511774 ANXA7P20073 488 aaKnown RBP12.71□□□□□ -0.37
HMGCS1-206ENST00000511774 NTN5Q8WTR8 489 aaPredicted RBP12.71□□□□□ -0.37
HMGCS1-206ENST00000511774 C15orf40Q8WUR7 153 aa12.71□□□□□ -0.37
HMGCS1-206ENST00000511774 ARV1Q9H2C2 271 aa12.71□□□□□ -0.37
HMGCS1-206ENST00000511774 PRO0255Q9UI72 69 aa12.71□□□□□ -0.37
HMGCS1-206ENST00000511774 SRPXP78539 464 aa12.7□□□□□ -0.38
HMGCS1-206ENST00000511774 MRPL23Q16540 153 aaKnown RBP12.7□□□□□ -0.38
HMGCS1-206ENST00000511774 Q6ZQT7 251 aa12.7□□□□□ -0.38
HMGCS1-206ENST00000511774 Q6ZSA8 131 aa12.7□□□□□ -0.38
HMGCS1-206ENST00000511774 NEGR1Q7Z3B1 354 aa12.7□□□□□ -0.38
HMGCS1-206ENST00000511774 ODF3Q96PU9 254 aa12.7□□□□□ -0.38
HMGCS1-206ENST00000511774 CIB3Q96Q77 187 aaPredicted RBP12.7□□□□□ -0.38
HMGCS1-206ENST00000511774 SLC50A1Q9BRV3 221 aa12.7□□□□□ -0.38
HMGCS1-206ENST00000511774 MRPL16Q9NX20 251 aaKnown RBP12.7□□□□□ -0.38
HMGCS1-206ENST00000511774 TP53TG3Q9ULZ0 132 aa12.7□□□□□ -0.38
HMGCS1-206ENST00000511774 ANKRD20A5PA0PJZ0 165 aa12.69□□□□□ -0.38
HMGCS1-206ENST00000511774 H3BQ15 152 aa12.69□□□□□ -0.38
HMGCS1-206ENST00000511774 CTDSP2O14595 271 aa12.69□□□□□ -0.38
HMGCS1-206ENST00000511774 MED6O75586 246 aa12.69□□□□□ -0.38
HMGCS1-206ENST00000511774 CRYGDP07320 174 aa12.69□□□□□ -0.38
HMGCS1-206ENST00000511774 SLC25A6P12236 298 aa12.69□□□□□ -0.38
HMGCS1-206ENST00000511774 LEPP41159 167 aa12.69□□□□□ -0.38
HMGCS1-206ENST00000511774 TCL1AP56279 114 aa12.69□□□□□ -0.38
HMGCS1-206ENST00000511774 CD300CQ08708 224 aa12.69□□□□□ -0.38
HMGCS1-206ENST00000511774 Q8N814 137 aa12.69□□□□□ -0.38
HMGCS1-206ENST00000511774 ZNF680Q8NEM1 530 aa12.69□□□□□ -0.38
HMGCS1-206ENST00000511774 AP3S1Q92572 193 aa12.69□□□□□ -0.38
HMGCS1-206ENST00000511774 SAT2Q96F10 170 aaPredicted RBP12.69□□□□□ -0.38
HMGCS1-206ENST00000511774 HHLA3Q9XRX5 114 aa12.69□□□□□ -0.38
HMGCS1-206ENST00000511774 RNF213Q63HN8 5207 aa12.69□□□□□ -0.38
HMGCS1-206ENST00000511774 DUXBA0A1W2PPF3 345 aa12.68□□□□□ -0.38
HMGCS1-206ENST00000511774 EVI2AP22794 236 aa12.68□□□□□ -0.38
HMGCS1-206ENST00000511774 RPP30P78346 268 aaKnown RBP12.68□□□□□ -0.38
HMGCS1-206ENST00000511774 MRPS10P82664 201 aaKnown RBP12.68□□□□□ -0.38
HMGCS1-206ENST00000511774 ERCC8Q13216 396 aa12.68□□□□□ -0.38
HMGCS1-206ENST00000511774 BTN1A1Q13410 526 aa12.68□□□□□ -0.38
HMGCS1-206ENST00000511774 CTF1Q16619 201 aa12.68□□□□□ -0.38
HMGCS1-206ENST00000511774 ANXA2RQ3ZCQ2 193 aa12.68□□□□□ -0.38
HMGCS1-206ENST00000511774 STRAPQ9Y3F4 350 aaKnown RBP12.68□□□□□ -0.38
HMGCS1-206ENST00000511774 A0A087WXM4 84 aa12.67□□□□□ -0.38
HMGCS1-206ENST00000511774 C7orf71A4D174 169 aa12.67□□□□□ -0.38
HMGCS1-206ENST00000511774 K7EQD1 137 aa12.67□□□□□ -0.38
HMGCS1-206ENST00000511774 IGLC2P0DOY2 106 aa12.67□□□□□ -0.38
HMGCS1-206ENST00000511774 ANXA3P12429 323 aa12.67□□□□□ -0.38
HMGCS1-206ENST00000511774 RRAS2P62070 204 aaPredicted RBP12.67□□□□□ -0.38
HMGCS1-206ENST00000511774 SELENOTP62341 195 aa12.67□□□□□ -0.38
HMGCS1-206ENST00000511774 SLC38A11Q08AI6 406 aa12.67□□□□□ -0.38
HMGCS1-206ENST00000511774 EIF4E3Q8N5X7 224 aaKnown RBP12.67□□□□□ -0.38
HMGCS1-206ENST00000511774 VGLL1Q99990 258 aa12.67□□□□□ -0.38
HMGCS1-206ENST00000511774 E5RGE8 158 aa12.66□□□□□ -0.38
HMGCS1-206ENST00000511774 K7EP13 123 aa12.66□□□□□ -0.38
HMGCS1-206ENST00000511774 C1QBP02746 253 aa12.66□□□□□ -0.38
HMGCS1-206ENST00000511774 WFDC2Q14508 124 aa12.66□□□□□ -0.38
HMGCS1-206ENST00000511774 LINC00305Q7Z4B0 112 aa12.66□□□□□ -0.38
HMGCS1-206ENST00000511774 LRTM2Q8N967 370 aa12.66□□□□□ -0.38
HMGCS1-206ENST00000511774 VCX3AQ9NNX9 186 aa12.66□□□□□ -0.38
HMGCS1-206ENST00000511774 SCP2D1Q9UJQ7 156 aa12.66□□□□□ -0.38
HMGCS1-206ENST00000511774 KLLNB2CW77 178 aa12.65□□□□□ -0.38
HMGCS1-206ENST00000511774 K7EPK0 472 aa12.65□□□□□ -0.38
HMGCS1-206ENST00000511774 CTDSPLO15194 276 aa12.65□□□□□ -0.38
HMGCS1-206ENST00000511774 SLC25A5P05141 298 aaKnown RBP12.65□□□□□ -0.38
HMGCS1-206ENST00000511774 OPCMLQ14982 345 aa12.65□□□□□ -0.38
HMGCS1-206ENST00000511774 TMEM37Q8WXS4 190 aa12.65□□□□□ -0.38
HMGCS1-206ENST00000511774 FAM19A4Q96LR4 140 aa12.65□□□□□ -0.38
HMGCS1-206ENST00000511774 SCGB3A2Q96PL1 93 aa12.65□□□□□ -0.38
HMGCS1-206ENST00000511774 MCUBQ9NWR8 336 aa12.65□□□□□ -0.38
HMGCS1-206ENST00000511774 RABL2BQ9UNT1 228 aa12.65□□□□□ -0.38
HMGCS1-206ENST00000511774 PSCAO43653 123 aa12.64□□□□□ -0.39
HMGCS1-206ENST00000511774 SFTA3P0C7M3 94 aa12.64□□□□□ -0.39
HMGCS1-206ENST00000511774 POLR2GP62487 172 aaKnown RBP eCLIP12.64□□□□□ -0.39
HMGCS1-206ENST00000511774 PRR9Q5T870 116 aa12.64□□□□□ -0.39
HMGCS1-206ENST00000511774 MRPL32Q9BYC8 188 aaKnown RBP12.64□□□□□ -0.39
HMGCS1-206ENST00000511774 PXMP4Q9Y6I8 212 aa12.64□□□□□ -0.39
HMGCS1-206ENST00000511774 M0R3E3 92 aa12.63□□□□□ -0.39
HMGCS1-206ENST00000511774 RGS5O15539 181 aa12.63□□□□□ -0.39
HMGCS1-206ENST00000511774 HOXB5P09067 269 aa12.63□□□□□ -0.39
HMGCS1-206ENST00000511774 SRIP30626 198 aa12.63□□□□□ -0.39
HMGCS1-206ENST00000511774 RNASE4P34096 147 aaKnown RBP12.63□□□□□ -0.39
HMGCS1-206ENST00000511774 BPIFA4PQ86YQ2 179 aa12.63□□□□□ -0.39
HMGCS1-206ENST00000511774 RCL1Q9Y2P8 373 aaKnown RBP12.63□□□□□ -0.39
HMGCS1-206ENST00000511774 TRAV5A0A0B4J249 113 aa12.62□□□□□ -0.39
HMGCS1-206ENST00000511774 OXTP01178 125 aa12.62□□□□□ -0.39
HMGCS1-206ENST00000511774 GYPEP15421 78 aa12.62□□□□□ -0.39
HMGCS1-206ENST00000511774 VAMP1P23763 118 aa12.62□□□□□ -0.39
HMGCS1-206ENST00000511774 SLAQ13239 276 aa12.62□□□□□ -0.39
HMGCS1-206ENST00000511774 IL18Q14116 193 aa12.62□□□□□ -0.39
HMGCS1-206ENST00000511774 C4orf46Q504U0 113 aa12.62□□□□□ -0.39
HMGCS1-206ENST00000511774 IBA57Q5T440 356 aaKnown RBP12.62□□□□□ -0.39
HMGCS1-206ENST00000511774 ZNF479Q96JC4 524 aa12.62□□□□□ -0.39
HMGCS1-206ENST00000511774 PSENENQ9NZ42 101 aa12.62□□□□□ -0.39
HMGCS1-206ENST00000511774 LRP2P98164 4655 aa12.62□□□□□ -0.39
HMGCS1-206ENST00000511774 ID3Q02535 119 aa12.61□□□□□ -0.39
HMGCS1-206ENST00000511774 ZNF415Q09FC8 603 aa12.61□□□□□ -0.39
HMGCS1-206ENST00000511774 TMEM128Q5BJH2 165 aa12.61□□□□□ -0.39
HMGCS1-206ENST00000511774 C10orf126Q8N4M7 172 aa12.61□□□□□ -0.39
HMGCS1-206ENST00000511774 AGPAT4-IT1Q9H0P7 198 aa12.61□□□□□ -0.39
HMGCS1-206ENST00000511774 Q9HAA7 133 aa12.61□□□□□ -0.39
HMGCS1-206ENST00000511774 LOC100131303A0A0U1RQF7 123 aa12.6□□□□□ -0.39
HMGCS1-206ENST00000511774 METTL15P1P0C7V9 234 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms