RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 ZNF431Q8TF32 576 aaPredicted RBP8.9□□□□□ -0.98
POLR2J3-216ENST00000511773 DEFB104AQ8WTQ1 72 aa8.9□□□□□ -0.98
POLR2J3-216ENST00000511773 SCGB3A2Q96PL1 93 aa8.9□□□□□ -0.98
POLR2J3-216ENST00000511773 ARV1Q9H2C2 271 aa8.9□□□□□ -0.98
POLR2J3-216ENST00000511773 MIXL1Q9H2W2 232 aa8.9□□□□□ -0.98
POLR2J3-216ENST00000511773 SCP2D1Q9UJQ7 156 aa8.9□□□□□ -0.98
POLR2J3-216ENST00000511773 STRAPQ9Y3F4 350 aaKnown RBP8.9□□□□□ -0.98
POLR2J3-216ENST00000511773 KLF12Q9Y4X4 402 aa8.9□□□□□ -0.98
POLR2J3-216ENST00000511773 DUXBA0A1W2PPF3 345 aa8.89□□□□□ -0.99
POLR2J3-216ENST00000511773 CRYGDP07320 174 aa8.89□□□□□ -0.99
POLR2J3-216ENST00000511773 CRYBA4P53673 196 aa8.89□□□□□ -0.99
POLR2J3-216ENST00000511773 PLP1P60201 277 aa8.89□□□□□ -0.99
POLR2J3-216ENST00000511773 RRAS2P62070 204 aaPredicted RBP8.89□□□□□ -0.99
POLR2J3-216ENST00000511773 MRPS10P82664 201 aaKnown RBP8.89□□□□□ -0.99
POLR2J3-216ENST00000511773 MRPL23Q16540 153 aaKnown RBP8.89□□□□□ -0.99
POLR2J3-216ENST00000511773 TEPPQ6URK8 271 aa8.89□□□□□ -0.99
POLR2J3-216ENST00000511773 S100A7AQ86SG5 101 aa8.89□□□□□ -0.99
POLR2J3-216ENST00000511773 ZBTB8BQ8NAP8 495 aaPredicted RBP8.89□□□□□ -0.99
POLR2J3-216ENST00000511773 NTN5Q8WTR8 489 aaPredicted RBP8.89□□□□□ -0.99
POLR2J3-216ENST00000511773 ST6GAL2Q96JF0 529 aa8.89□□□□□ -0.99
POLR2J3-216ENST00000511773 MRPL16Q9NX20 251 aaKnown RBP8.89□□□□□ -0.99
POLR2J3-216ENST00000511773 PRO0255Q9UI72 69 aa8.89□□□□□ -0.99
POLR2J3-216ENST00000511773 HHLA3Q9XRX5 114 aa8.89□□□□□ -0.99
POLR2J3-216ENST00000511773 LRP1Q07954 4544 aaKnown RBP8.89□□□□□ -0.99
POLR2J3-216ENST00000511773 C7orf71A4D174 169 aa8.88□□□□□ -0.99
POLR2J3-216ENST00000511773 LRCOL1A6NCL2 159 aa8.88□□□□□ -0.99
POLR2J3-216ENST00000511773 E5RGE8 158 aa8.88□□□□□ -0.99
POLR2J3-216ENST00000511773 SPINK4O60575 86 aa8.88□□□□□ -0.99
POLR2J3-216ENST00000511773 VAMP1P23763 118 aa8.88□□□□□ -0.99
POLR2J3-216ENST00000511773 SELENOTP62341 195 aa8.88□□□□□ -0.99
POLR2J3-216ENST00000511773 SLC38A11Q08AI6 406 aa8.88□□□□□ -0.99
POLR2J3-216ENST00000511773 LINC00305Q7Z4B0 112 aa8.88□□□□□ -0.99
POLR2J3-216ENST00000511773 NAA50Q9GZZ1 169 aaKnown RBP8.88□□□□□ -0.99
POLR2J3-216ENST00000511773 PIGBOS1A0A0B4J2F0 54 aa8.87□□□□□ -0.99
POLR2J3-216ENST00000511773 SLC25A6P12236 298 aa8.87□□□□□ -0.99
POLR2J3-216ENST00000511773 SRIP30626 198 aa8.87□□□□□ -0.99
POLR2J3-216ENST00000511773 ZNF415Q09FC8 603 aa8.87□□□□□ -0.99
POLR2J3-216ENST00000511773 BTN1A1Q13410 526 aa8.87□□□□□ -0.99
POLR2J3-216ENST00000511773 IL18Q14116 193 aa8.87□□□□□ -0.99
POLR2J3-216ENST00000511773 Q8N814 137 aa8.87□□□□□ -0.99
POLR2J3-216ENST00000511773 ODF3Q96PU9 254 aa8.87□□□□□ -0.99
POLR2J3-216ENST00000511773 ANKRD20A5PA0PJZ0 165 aa8.86□□□□□ -0.99
POLR2J3-216ENST00000511773 K7EP13 123 aa8.86□□□□□ -0.99
POLR2J3-216ENST00000511773 CCNKO75909 580 aa8.86□□□□□ -0.99
POLR2J3-216ENST00000511773 SLC25A5P05141 298 aaKnown RBP8.86□□□□□ -0.99
POLR2J3-216ENST00000511773 HOXB5P09067 269 aa8.86□□□□□ -0.99
POLR2J3-216ENST00000511773 RNASE4P34096 147 aaKnown RBP8.86□□□□□ -0.99
POLR2J3-216ENST00000511773 TCL1AP56279 114 aa8.86□□□□□ -0.99
POLR2J3-216ENST00000511773 CD300CQ08708 224 aa8.86□□□□□ -0.99
POLR2J3-216ENST00000511773 ERCC8Q13216 396 aa8.86□□□□□ -0.99
POLR2J3-216ENST00000511773 FHL2Q14192 279 aa8.86□□□□□ -0.99
POLR2J3-216ENST00000511773 MORN5Q5VZ52 161 aa8.86□□□□□ -0.99
POLR2J3-216ENST00000511773 BPIFA4PQ86YQ2 179 aa8.86□□□□□ -0.99
POLR2J3-216ENST00000511773 EIF4E3Q8N5X7 224 aaKnown RBP8.86□□□□□ -0.99
POLR2J3-216ENST00000511773 TP53TG3Q9ULZ0 132 aa8.86□□□□□ -0.99
POLR2J3-216ENST00000511773 RABL2BQ9UNT1 228 aa8.86□□□□□ -0.99
POLR2J3-216ENST00000511773 RNF24Q9Y225 148 aa8.86□□□□□ -0.99
POLR2J3-216ENST00000511773 PXMP4Q9Y6I8 212 aa8.86□□□□□ -0.99
POLR2J3-216ENST00000511773 TRGV4A0A0C4DH28 118 aa8.85□□□□□ -0.99
POLR2J3-216ENST00000511773 H3BQ15 152 aa8.85□□□□□ -0.99
POLR2J3-216ENST00000511773 K7EQD1 137 aa8.85□□□□□ -0.99
POLR2J3-216ENST00000511773 CTDSP2O14595 271 aa8.85□□□□□ -0.99
POLR2J3-216ENST00000511773 COX7A2P2O60397 106 aa8.85□□□□□ -0.99
POLR2J3-216ENST00000511773 C10orf126Q8N4M7 172 aa8.85□□□□□ -0.99
POLR2J3-216ENST00000511773 PCNPQ8WW12 178 aaKnown RBP8.85□□□□□ -0.99
POLR2J3-216ENST00000511773 VGLL1Q99990 258 aa8.85□□□□□ -0.99
POLR2J3-216ENST00000511773 Q9HAA7 133 aa8.85□□□□□ -0.99
POLR2J3-216ENST00000511773 PSENENQ9NZ42 101 aa8.85□□□□□ -0.99
POLR2J3-216ENST00000511773 RCL1Q9Y2P8 373 aaKnown RBP8.85□□□□□ -0.99
POLR2J3-216ENST00000511773 GOSR2O14653 212 aa8.84□□□□□ -0.99
POLR2J3-216ENST00000511773 SSSCA1O60232 199 aa8.84□□□□□ -0.99
POLR2J3-216ENST00000511773 IGLC2P0DOY2 106 aa8.84□□□□□ -0.99
POLR2J3-216ENST00000511773 GYPEP15421 78 aa8.84□□□□□ -0.99
POLR2J3-216ENST00000511773 POLR2GP62487 172 aaKnown RBP eCLIP8.84□□□□□ -0.99
POLR2J3-216ENST00000511773 SLAQ13239 276 aa8.84□□□□□ -0.99
POLR2J3-216ENST00000511773 CTF1Q16619 201 aa8.84□□□□□ -0.99
POLR2J3-216ENST00000511773 ANXA2RQ3ZCQ2 193 aa8.84□□□□□ -0.99
POLR2J3-216ENST00000511773 CCDC59Q9P031 241 aaKnown RBP8.84□□□□□ -0.99
POLR2J3-216ENST00000511773 RGS13O14921 159 aa8.83□□□□□ -1
POLR2J3-216ENST00000511773 CTDSPLO15194 276 aa8.83□□□□□ -1
POLR2J3-216ENST00000511773 MPDU1O75352 247 aa8.83□□□□□ -1
POLR2J3-216ENST00000511773 SFTA3P0C7M3 94 aa8.83□□□□□ -1
POLR2J3-216ENST00000511773 METTL15P1P0C7V9 234 aa8.83□□□□□ -1
POLR2J3-216ENST00000511773 OPCMLQ14982 345 aa8.83□□□□□ -1
POLR2J3-216ENST00000511773 TMEM128Q5BJH2 165 aa8.83□□□□□ -1
POLR2J3-216ENST00000511773 ZNF546Q86UE3 836 aa8.83□□□□□ -1
POLR2J3-216ENST00000511773 LRTM2Q8N967 370 aa8.83□□□□□ -1
POLR2J3-216ENST00000511773 DIRAS2Q96HU8 199 aa8.83□□□□□ -1
POLR2J3-216ENST00000511773 ARPC5LQ9BPX5 153 aa8.83□□□□□ -1
POLR2J3-216ENST00000511773 MGAT4CQ9UBM8 478 aa8.83□□□□□ -1
POLR2J3-216ENST00000511773 FAT3Q8TDW7 4589 aa8.82□□□□□ -1
POLR2J3-216ENST00000511773 KLLNB2CW77 178 aa8.82□□□□□ -1
POLR2J3-216ENST00000511773 K7EPK0 472 aa8.82□□□□□ -1
POLR2J3-216ENST00000511773 M0R3E3 92 aa8.82□□□□□ -1
POLR2J3-216ENST00000511773 C1QBP02746 253 aa8.82□□□□□ -1
POLR2J3-216ENST00000511773 OR4E1P0C645 316 aa8.82□□□□□ -1
POLR2J3-216ENST00000511773 IBA57Q5T440 356 aaKnown RBP8.82□□□□□ -1
POLR2J3-216ENST00000511773 PXDC1Q5TGL8 231 aa8.82□□□□□ -1
POLR2J3-216ENST00000511773 C10orf113Q5VZT2 155 aa8.82□□□□□ -1
POLR2J3-216ENST00000511773 Q6ZQT7 251 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms