RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 SMIM31A0A1B0GVY4 71 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 FUOMA2VDF0 154 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 B4DSR2 109 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 NDUFC2O95298 119 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 RNASE3P12724 160 aaKnown RBP1.48□□□□□ -2.17
USP53-204ENST00000507906 SERPINB1P30740 379 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 SRP14P37108 136 aaKnown RBP1.48□□□□□ -2.17
USP53-204ENST00000507906 EIF5AP63241 154 aaKnown RBP1.48□□□□□ -2.17
USP53-204ENST00000507906 RHOGP84095 191 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 LTC4SQ16873 150 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 AKR1C8PQ5T2L2 129 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 LINC00301Q8NCQ3 95 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 SLC30A7Q8NEW0 376 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 ZNF418Q8TF45 676 aaPredicted RBP1.48□□□□□ -2.17
USP53-204ENST00000507906 ZC2HC1AQ96GY0 325 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 SERPINI1Q99574 410 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 PCBD2Q9H0N5 130 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 TAS2R4Q9NYW5 299 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 SSR3Q9UNL2 185 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 DDX60LQ5H9U9 1706 aaKnown RBP1.48□□□□□ -2.17
USP53-204ENST00000507906 NRAPQ86VF7 1730 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 ARAP2Q8WZ64 1704 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 MRC2Q9UBG0 1479 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 ALPK3Q96L96 1907 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 COL4A1P02462 1669 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 DISP2A7MBM2 1401 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 FN1P02751 2386 aaKnown RBP1.48□□□□□ -2.17
USP53-204ENST00000507906 PRG4Q92954 1404 aaPredicted RBP1.48□□□□□ -2.17
USP53-204ENST00000507906 SBF1O95248 1867 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 LRP6O75581 1613 aa1.48□□□□□ -2.17
USP53-204ENST00000507906 SBF2Q86WG5 1849 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 NFAT5O94916 1531 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 DOT1LQ8TEK3 1739 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 NDUFA2O43678 99 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 GADD45GO95257 159 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 CRHP06850 196 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 MIFP14174 115 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 UBE2BP63146 152 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 DR1Q01658 176 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 ESRGQ1W209 222 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 C22orf39Q6P5X5 142 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 C4orf22Q6V702 233 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 GRINAQ7Z429 371 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 PDZD9Q8IXQ8 264 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 IFT20Q8IY31 132 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 DYDC1Q8WWB3 177 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 MAGOHBQ96A72 148 aaKnown RBP1.47□□□□□ -2.17
USP53-204ENST00000507906 CARD19Q96LW7 228 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 MIXL1Q9H2W2 232 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 LTN1O94822 1766 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 DIP2CQ9Y2E4 1556 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 CPDO75976 1380 aa1.47□□□□□ -2.17
USP53-204ENST00000507906 PVALEFA0A1B0GWK0 134 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 ODAMA1E959 279 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 C7orf71A4D174 169 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 RIIAD1A6NNX1 92 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 NDUFB3O43676 98 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 SULT1C4O75897 302 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 LYZL6O75951 148 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 CXCL1P09341 107 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 NFYBP25208 207 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 CCDC58Q4VC31 144 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 C10orf55Q5SWW7 151 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 IZUMO2Q6UXV1 221 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 ARPINQ7Z6K5 226 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 LINC00311Q8N616 119 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 OR2T10Q8NGZ9 312 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 C10orf82Q8WW14 230 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 BORCS5Q969J3 196 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 GPX7Q96SL4 187 aaPredicted RBP1.46□□□□□ -2.18
USP53-204ENST00000507906 PBDC1Q9BVG4 233 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 BIN3Q9NQY0 253 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 SAR1AQ9NR31 198 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 SMPXQ9UHP9 88 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 CICQ96RK0 1608 aaPredicted RBP1.46□□□□□ -2.18
USP53-204ENST00000507906 ZNF609O15014 1411 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 DENND4CQ5VZ89 1909 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 COL24A1Q17RW2 1714 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 KIAA1551Q9HCM1 1747 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 TRPM7Q96QT4 1865 aa1.46□□□□□ -2.18
USP53-204ENST00000507906 NHSL1Q5SYE7 1610 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 MYLKQ15746 1914 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 FBN1P35555 2871 aaKnown RBP1.45□□□□□ -2.18
USP53-204ENST00000507906 MYO18AQ92614 2054 aaKnown RBP1.45□□□□□ -2.18
USP53-204ENST00000507906 MEIKINA0A087WXM9 373 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 A0A0D9SFI3 127 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 DUXBA0A1W2PPF3 345 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 MIF4GDA9UHW6 222 aaKnown RBP1.45□□□□□ -2.18
USP53-204ENST00000507906 H3BQV1 296 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 GPR31O00270 319 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 TIMM17BO60830 172 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 UBL3O95164 117 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 DYNLT3P51808 116 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 PDE6HQ13956 83 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 SPANXN5Q5MJ07 72 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 BCL2L15Q5TBC7 163 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 IDO2Q6ZQW0 420 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 STX19Q8N4C7 294 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 C10orf126Q8N4M7 172 aa1.45□□□□□ -2.18
USP53-204ENST00000507906 SELENOSQ9BQE4 189 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms