RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 AMBPP02760 352 aa14.45□□□□□ -0.1
SNX25-204ENST00000506896 HIST1H1AQ02539 215 aaPredicted RBP14.45□□□□□ -0.1
SNX25-204ENST00000506896 PQLC2Q6ZP29 291 aa14.45□□□□□ -0.1
SNX25-204ENST00000506896 OR11H4Q8NGC9 324 aa14.45□□□□□ -0.1
SNX25-204ENST00000506896 SLC35B3Q9H1N7 401 aa14.45□□□□□ -0.1
SNX25-204ENST00000506896 OR10J4P0C629 311 aa14.44□□□□□ -0.1
SNX25-204ENST00000506896 ZNF705DP0CH99 300 aaPredicted RBP14.44□□□□□ -0.1
SNX25-204ENST00000506896 ZNF705BP0CI00 300 aaPredicted RBP14.44□□□□□ -0.1
SNX25-204ENST00000506896 UBE2L3P68036 154 aaKnown RBP14.44□□□□□ -0.1
SNX25-204ENST00000506896 ZFAND6Q6FIF0 208 aa14.44□□□□□ -0.1
SNX25-204ENST00000506896 AMTNQ6UX39 209 aa14.44□□□□□ -0.1
SNX25-204ENST00000506896 TCTE3Q8IZS6 198 aa14.44□□□□□ -0.1
SNX25-204ENST00000506896 OR10J6PQ8NGY7 276 aa14.44□□□□□ -0.1
SNX25-204ENST00000506896 ST6GAL2Q96JF0 529 aa14.44□□□□□ -0.1
SNX25-204ENST00000506896 ARPC5LQ9BPX5 153 aa14.44□□□□□ -0.1
SNX25-204ENST00000506896 SH3BGRL3Q9H299 93 aa14.44□□□□□ -0.1
SNX25-204ENST00000506896 A0A0J9YWU9 116 aa14.43□□□□□ -0.1
SNX25-204ENST00000506896 ZNF705FA8MVS1 300 aaPredicted RBP14.43□□□□□ -0.1
SNX25-204ENST00000506896 MIFP14174 115 aa14.43□□□□□ -0.1
SNX25-204ENST00000506896 FXYD7P58549 80 aa14.43□□□□□ -0.1
SNX25-204ENST00000506896 FAM122CQ6P4D5 195 aa14.43□□□□□ -0.1
SNX25-204ENST00000506896 LYPD1Q8N2G4 141 aa14.43□□□□□ -0.1
SNX25-204ENST00000506896 ZNF503Q96F45 646 aa14.43□□□□□ -0.1
SNX25-204ENST00000506896 C11orf68Q9H3H3 251 aaKnown RBP14.43□□□□□ -0.1
SNX25-204ENST00000506896 CYTL1Q9NRR1 136 aa14.43□□□□□ -0.1
SNX25-204ENST00000506896 PPP1R14DQ9NXH3 145 aa14.43□□□□□ -0.1
SNX25-204ENST00000506896 CDC34P49427 236 aaPredicted RBP14.42□□□□□ -0.1
SNX25-204ENST00000506896 RPP25LQ8N5L8 163 aaKnown RBP14.42□□□□□ -0.1
SNX25-204ENST00000506896 KANTRA0A1W2PQU2 76 aa14.41□□□□□ -0.1
SNX25-204ENST00000506896 BOLA2-SMG1P6H3BVE0 249 aa14.41□□□□□ -0.1
SNX25-204ENST00000506896 ZNF705AQ6ZN79 300 aaPredicted RBP14.41□□□□□ -0.1
SNX25-204ENST00000506896 EXOC3-AS1Q8N2X6 119 aa14.41□□□□□ -0.1
SNX25-204ENST00000506896 ACTR3CQ9C0K3 210 aaPredicted RBP14.41□□□□□ -0.1
SNX25-204ENST00000506896 GOLT1BQ9Y3E0 138 aa14.41□□□□□ -0.1
SNX25-204ENST00000506896 X6R8D5 127 aa14.41□□□□□ -0.1
SNX25-204ENST00000506896 PLECQ15149 4684 aaKnown RBP14.41□□□□□ -0.1
SNX25-204ENST00000506896 PRAC2D3DTV9 90 aa14.4□□□□□ -0.1
SNX25-204ENST00000506896 M0R3E3 92 aa14.4□□□□□ -0.1
SNX25-204ENST00000506896 ICAM4Q14773 271 aa14.4□□□□□ -0.1
SNX25-204ENST00000506896 Q8NAQ8 132 aa14.4□□□□□ -0.1
SNX25-204ENST00000506896 RAB24Q969Q5 203 aa14.4□□□□□ -0.1
SNX25-204ENST00000506896 PHYHIPLQ96FC7 376 aa14.4□□□□□ -0.1
SNX25-204ENST00000506896 IGF2BP2-AS1Q96M15 143 aa14.4□□□□□ -0.1
SNX25-204ENST00000506896 NEU1Q99519 415 aa14.4□□□□□ -0.1
SNX25-204ENST00000506896 RYR2Q92736 4967 aa14.4□□□□□ -0.1
SNX25-204ENST00000506896 SMIM9A6NGZ8 99 aa14.39□□□□□ -0.11
SNX25-204ENST00000506896 BCL2L11O43521 198 aa14.39□□□□□ -0.11
SNX25-204ENST00000506896 INSP01308 110 aa14.39□□□□□ -0.11
SNX25-204ENST00000506896 STAG3L2P0CL84 134 aa14.39□□□□□ -0.11
SNX25-204ENST00000506896 STAG3L3P0CL85 134 aa14.39□□□□□ -0.11
SNX25-204ENST00000506896 SPINK13Q1W4C9 94 aa14.39□□□□□ -0.11
SNX25-204ENST00000506896 AKAP14Q86UN6 197 aa14.39□□□□□ -0.11
SNX25-204ENST00000506896 hCG_2014768A0A024R1R8 64 aa14.38□□□□□ -0.11
SNX25-204ENST00000506896 NPIPB6E9PJ23 425 aa14.38□□□□□ -0.11
SNX25-204ENST00000506896 M0R2Z0 102 aa14.38□□□□□ -0.11
SNX25-204ENST00000506896 TSPOP30536 169 aa14.38□□□□□ -0.11
SNX25-204ENST00000506896 RANP62826 216 aaKnown RBP14.38□□□□□ -0.11
SNX25-204ENST00000506896 EIF5AP63241 154 aaKnown RBP14.38□□□□□ -0.11
SNX25-204ENST00000506896 AKR1C8PQ5T2L2 129 aa14.38□□□□□ -0.11
SNX25-204ENST00000506896 ODF3Q96PU9 254 aa14.38□□□□□ -0.11
SNX25-204ENST00000506896 DNAH1Q9P2D7 4330 aa14.37□□□□□ -0.11
SNX25-204ENST00000506896 IGHV4-28A0A0C4DH34 117 aa14.37□□□□□ -0.11
SNX25-204ENST00000506896 PFDN1O60925 122 aa14.37□□□□□ -0.11
SNX25-204ENST00000506896 ARL14EPLP0DKL9 152 aa14.37□□□□□ -0.11
SNX25-204ENST00000506896 CDKN1BP46527 198 aa14.37□□□□□ -0.11
SNX25-204ENST00000506896 CSN1S1P47710 185 aa14.37□□□□□ -0.11
SNX25-204ENST00000506896 FAM74A1Q5RGS3 127 aa14.37□□□□□ -0.11
SNX25-204ENST00000506896 ZNF471Q9BX82 626 aaPredicted RBP14.37□□□□□ -0.11
SNX25-204ENST00000506896 Q9H3A6 140 aa14.37□□□□□ -0.11
SNX25-204ENST00000506896 HMGB3O15347 200 aaKnown RBP14.36□□□□□ -0.11
SNX25-204ENST00000506896 CRXO43186 299 aaPredicted RBP14.36□□□□□ -0.11
SNX25-204ENST00000506896 EIF3GO75821 320 aaKnown RBP eCLIP14.36□□□□□ -0.11
SNX25-204ENST00000506896 CXorf1O96002 111 aa14.36□□□□□ -0.11
SNX25-204ENST00000506896 C1QBP02746 253 aa14.36□□□□□ -0.11
SNX25-204ENST00000506896 PRB4P10163 310 aaPredicted RBP14.36□□□□□ -0.11
SNX25-204ENST00000506896 TMUB2Q71RG4 321 aa14.36□□□□□ -0.11
SNX25-204ENST00000506896 RXFP4Q8TDU9 374 aa14.36□□□□□ -0.11
SNX25-204ENST00000506896 LINC00477Q96M19 166 aa14.36□□□□□ -0.11
SNX25-204ENST00000506896 TMEM208Q9BTX3 173 aa14.36□□□□□ -0.11
SNX25-204ENST00000506896 OTORQ9NRC9 128 aa14.36□□□□□ -0.11
SNX25-204ENST00000506896 IGHV3OR16-12A0A075B7B8 117 aa14.35□□□□□ -0.11
SNX25-204ENST00000506896 CTXND1A0A1B0GTU2 59 aa14.35□□□□□ -0.11
SNX25-204ENST00000506896 SEC11BP0C7V7 166 aa14.35□□□□□ -0.11
SNX25-204ENST00000506896 C9orf47Q6ZRZ4 202 aa14.35□□□□□ -0.11
SNX25-204ENST00000506896 BAP18Q8IXM2 172 aa14.35□□□□□ -0.11
SNX25-204ENST00000506896 C1orf158Q8N1D5 194 aa14.35□□□□□ -0.11
SNX25-204ENST00000506896 HYLS1Q96M11 299 aa14.35□□□□□ -0.11
SNX25-204ENST00000506896 TMEM167BQ9NRX6 74 aa14.35□□□□□ -0.11
SNX25-204ENST00000506896 TRAV12-2A0A075B6T6 113 aa14.34□□□□□ -0.11
SNX25-204ENST00000506896 TMEM189A5PLL7 270 aa14.34□□□□□ -0.11
SNX25-204ENST00000506896 HBE1P02100 147 aa14.34□□□□□ -0.11
SNX25-204ENST00000506896 RBMY1A1P0DJD3 496 aaKnown RBP14.34□□□□□ -0.11
SNX25-204ENST00000506896 RBMY1CP0DJD4 496 aa14.34□□□□□ -0.11
SNX25-204ENST00000506896 CT45A10P0DMU9 189 aa14.34□□□□□ -0.11
SNX25-204ENST00000506896 GCHFRP30047 84 aa14.34□□□□□ -0.11
SNX25-204ENST00000506896 LEPP41159 167 aa14.34□□□□□ -0.11
SNX25-204ENST00000506896 RBMY1FQ15415 496 aaKnown RBP14.34□□□□□ -0.11
SNX25-204ENST00000506896 TMEM256Q8N2U0 113 aa14.34□□□□□ -0.11
SNX25-204ENST00000506896 ARL6IP6Q8N6S5 226 aa14.34□□□□□ -0.11
SNX25-204ENST00000506896 SUN5Q8TC36 379 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms