RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 ZNF738Q8NE65 137 aa9.45□□□□□ -0.9
TCOF1-210ENST00000506767 KIR2DL5BQ8NHK3 375 aa9.45□□□□□ -0.9
TCOF1-210ENST00000506767 MRPL53Q96EL3 112 aaKnown RBP9.45□□□□□ -0.9
TCOF1-210ENST00000506767 PRELID1Q9Y255 219 aa9.45□□□□□ -0.9
TCOF1-210ENST00000506767 MAP1LC3B2A6NCE7 125 aa9.44□□□□□ -0.9
TCOF1-210ENST00000506767 ZNF705FA8MVS1 300 aaPredicted RBP9.44□□□□□ -0.9
TCOF1-210ENST00000506767 RPL35AP18077 110 aaKnown RBP9.44□□□□□ -0.9
TCOF1-210ENST00000506767 RANP62826 216 aaKnown RBP9.44□□□□□ -0.9
TCOF1-210ENST00000506767 ICAM4Q14773 271 aa9.44□□□□□ -0.9
TCOF1-210ENST00000506767 EBLN2Q6P2I7 272 aa9.44□□□□□ -0.9
TCOF1-210ENST00000506767 FAM213BQ8TBF2 198 aa9.44□□□□□ -0.9
TCOF1-210ENST00000506767 RPUSD4Q96CM3 377 aaKnown RBP9.44□□□□□ -0.9
TCOF1-210ENST00000506767 MAP1LC3BQ9GZQ8 125 aa9.44□□□□□ -0.9
TCOF1-210ENST00000506767 Q9H3A6 140 aa9.44□□□□□ -0.9
TCOF1-210ENST00000506767 AAMDCQ9H7C9 122 aa9.44□□□□□ -0.9
TCOF1-210ENST00000506767 TMEM167BQ9NRX6 74 aa9.44□□□□□ -0.9
TCOF1-210ENST00000506767 AGRNO00468 2067 aa9.44□□□□□ -0.9
TCOF1-210ENST00000506767 PRAC2D3DTV9 90 aa9.43□□□□□ -0.9
TCOF1-210ENST00000506767 M0R3E3 92 aa9.43□□□□□ -0.9
TCOF1-210ENST00000506767 FGF8P55075 233 aaPredicted RBP9.43□□□□□ -0.9
TCOF1-210ENST00000506767 OR8A1Q8NGG7 326 aa9.43□□□□□ -0.9
TCOF1-210ENST00000506767 TMPRSS5Q9H3S3 457 aa9.43□□□□□ -0.9
TCOF1-210ENST00000506767 DUSP14O95147 198 aaKnown RBP9.42□□□□□ -0.9
TCOF1-210ENST00000506767 GIG44P09565 113 aaPredicted RBP9.42□□□□□ -0.9
TCOF1-210ENST00000506767 H2AFB1P0C5Y9 115 aa9.42□□□□□ -0.9
TCOF1-210ENST00000506767 ZNF705DP0CH99 300 aaPredicted RBP9.42□□□□□ -0.9
TCOF1-210ENST00000506767 ZNF705BP0CI00 300 aaPredicted RBP9.42□□□□□ -0.9
TCOF1-210ENST00000506767 CNN1P51911 297 aaKnown RBP9.42□□□□□ -0.9
TCOF1-210ENST00000506767 APOC4P55056 127 aa9.42□□□□□ -0.9
TCOF1-210ENST00000506767 MORN3Q6PF18 240 aaPredicted RBP9.42□□□□□ -0.9
TCOF1-210ENST00000506767 SFT2D1Q8WV19 159 aa9.42□□□□□ -0.9
TCOF1-210ENST00000506767 ASCL2Q99929 193 aa9.42□□□□□ -0.9
TCOF1-210ENST00000506767 TM2D3Q9BRN9 247 aa9.42□□□□□ -0.9
TCOF1-210ENST00000506767 CSTL1Q9H114 145 aa9.42□□□□□ -0.9
TCOF1-210ENST00000506767 OTORQ9NRC9 128 aa9.42□□□□□ -0.9
TCOF1-210ENST00000506767 DNAH9Q9NYC9 4486 aa9.41□□□□□ -0.9
TCOF1-210ENST00000506767 TRAV1-1A0A0B4J248 108 aa9.41□□□□□ -0.9
TCOF1-210ENST00000506767 A0A1W2PRE2 83 aa9.41□□□□□ -0.9
TCOF1-210ENST00000506767 PGPA6NDG6 321 aa9.41□□□□□ -0.9
TCOF1-210ENST00000506767 UBE2CO00762 179 aa9.41□□□□□ -0.9
TCOF1-210ENST00000506767 PRB4P10163 310 aaPredicted RBP9.41□□□□□ -0.9
TCOF1-210ENST00000506767 FAM74A1Q5RGS3 127 aa9.41□□□□□ -0.9
TCOF1-210ENST00000506767 AMTNQ6UX39 209 aa9.41□□□□□ -0.9
TCOF1-210ENST00000506767 ALKAL2Q6UX46 152 aa9.41□□□□□ -0.9
TCOF1-210ENST00000506767 ARL6IP6Q8N6S5 226 aa9.41□□□□□ -0.9
TCOF1-210ENST00000506767 NHLRC4P0CG21 123 aaPredicted RBP9.4□□□□□ -0.9
TCOF1-210ENST00000506767 HIST1H1AQ02539 215 aaPredicted RBP9.4□□□□□ -0.9
TCOF1-210ENST00000506767 Q6ZWC4 215 aa9.4□□□□□ -0.9
TCOF1-210ENST00000506767 OR4B1Q8NGF8 309 aa9.4□□□□□ -0.9
TCOF1-210ENST00000506767 RXFP4Q8TDU9 374 aa9.4□□□□□ -0.9
TCOF1-210ENST00000506767 GGTLC3B5MD39 225 aa9.39□□□□□ -0.91
TCOF1-210ENST00000506767 DIRC3C9JPN6 131 aa9.39□□□□□ -0.91
TCOF1-210ENST00000506767 NPIPB6E9PJ23 425 aa9.39□□□□□ -0.91
TCOF1-210ENST00000506767 IGKV3-20P01619 116 aa9.39□□□□□ -0.91
TCOF1-210ENST00000506767 NUTF2P61970 127 aaKnown RBP9.39□□□□□ -0.91
TCOF1-210ENST00000506767 IQCF2Q8IXL9 164 aa9.39□□□□□ -0.91
TCOF1-210ENST00000506767 OR10J6PQ8NGY7 276 aa9.39□□□□□ -0.91
TCOF1-210ENST00000506767 YTHDF2Q9Y5A9 579 aaKnown RBP9.39□□□□□ -0.91
TCOF1-210ENST00000506767 ARL2-SNX15V9GYD0 113 aa9.39□□□□□ -0.91
TCOF1-210ENST00000506767 RBAKDNA6NC62 111 aa9.38□□□□□ -0.91
TCOF1-210ENST00000506767 FAM74A7A6NL05 159 aa9.38□□□□□ -0.91
TCOF1-210ENST00000506767 ZNF705EA8MWA4 302 aaPredicted RBP9.38□□□□□ -0.91
TCOF1-210ENST00000506767 CA1P00915 261 aaPredicted RBP9.38□□□□□ -0.91
TCOF1-210ENST00000506767 SLC25A5P05141 298 aaKnown RBP9.38□□□□□ -0.91
TCOF1-210ENST00000506767 CSN1S1P47710 185 aa9.38□□□□□ -0.91
TCOF1-210ENST00000506767 SUMO1P63165 101 aaKnown RBP9.38□□□□□ -0.91
TCOF1-210ENST00000506767 CCL20P78556 96 aa9.38□□□□□ -0.91
TCOF1-210ENST00000506767 TEX261Q6UWH6 196 aa9.38□□□□□ -0.91
TCOF1-210ENST00000506767 C9orf47Q6ZRZ4 202 aa9.38□□□□□ -0.91
TCOF1-210ENST00000506767 CSNK1G2-AS1Q8NCQ2 148 aa9.38□□□□□ -0.91
TCOF1-210ENST00000506767 SPATA25Q9BR10 227 aa9.38□□□□□ -0.91
TCOF1-210ENST00000506767 NKX6-2Q9C056 277 aaPredicted RBP9.38□□□□□ -0.91
TCOF1-210ENST00000506767 AGPAT4-IT1Q9H0P7 198 aa9.38□□□□□ -0.91
TCOF1-210ENST00000506767 SLC35B3Q9H1N7 401 aa9.38□□□□□ -0.91
TCOF1-210ENST00000506767 IGKV2-40A0A087WW87 121 aaPredicted RBP9.37□□□□□ -0.91
TCOF1-210ENST00000506767 A0A1B0GV50 99 aa9.37□□□□□ -0.91
TCOF1-210ENST00000506767 IGKV2D-40P01614 121 aaPredicted RBP9.37□□□□□ -0.91
TCOF1-210ENST00000506767 HBE1P02100 147 aa9.37□□□□□ -0.91
TCOF1-210ENST00000506767 CT45A10P0DMU9 189 aa9.37□□□□□ -0.91
TCOF1-210ENST00000506767 UBE2G2P60604 165 aa9.37□□□□□ -0.91
TCOF1-210ENST00000506767 ERCC8Q13216 396 aa9.37□□□□□ -0.91
TCOF1-210ENST00000506767 PMS2P11Q13670 270 aa9.37□□□□□ -0.91
TCOF1-210ENST00000506767 CCDC28AQ8IWP9 274 aa9.37□□□□□ -0.91
TCOF1-210ENST00000506767 C5orf17Q8NAS9 161 aa9.37□□□□□ -0.91
TCOF1-210ENST00000506767 CMTM2Q8TAZ6 248 aa9.37□□□□□ -0.91
TCOF1-210ENST00000506767 RNF183Q96D59 192 aa9.37□□□□□ -0.91
TCOF1-210ENST00000506767 FAM19A4Q96LR4 140 aa9.37□□□□□ -0.91
TCOF1-210ENST00000506767 LINC00477Q96M19 166 aa9.37□□□□□ -0.91
TCOF1-210ENST00000506767 ODF3Q96PU9 254 aa9.37□□□□□ -0.91
TCOF1-210ENST00000506767 VGLL1Q99990 258 aa9.37□□□□□ -0.91
TCOF1-210ENST00000506767 OVOL2Q9BRP0 275 aa9.37□□□□□ -0.91
TCOF1-210ENST00000506767 C1QTNF4Q9BXJ3 329 aa9.37□□□□□ -0.91
TCOF1-210ENST00000506767 PPP1R14DQ9NXH3 145 aa9.37□□□□□ -0.91
TCOF1-210ENST00000506767 TP53TG1Q9Y2A0 90 aa9.37□□□□□ -0.91
TCOF1-210ENST00000506767 HUWE1Q7Z6Z7 4374 aaKnown RBP9.36□□□□□ -0.91
TCOF1-210ENST00000506767 TEX46H3BTG2 121 aa9.36□□□□□ -0.91
TCOF1-210ENST00000506767 CRXO43186 299 aaPredicted RBP9.36□□□□□ -0.91
TCOF1-210ENST00000506767 TCRAP04437 139 aa9.36□□□□□ -0.91
TCOF1-210ENST00000506767 PPT1P50897 306 aa9.36□□□□□ -0.91
TCOF1-210ENST00000506767 FXYD7P58549 80 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms