RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 ZNF469Q96JG9 3925 aaPredicted RBP9.16□□□□□ -0.94
POLR2J3-211ENST00000506060 FN1P02751 2386 aaKnown RBP9.15□□□□□ -0.94
POLR2J3-211ENST00000506060 TRBV20OR9-2A0A075B6H5 130 aa9.15□□□□□ -0.94
POLR2J3-211ENST00000506060 TRAV34A0A0B4J273 112 aa9.15□□□□□ -0.94
POLR2J3-211ENST00000506060 RBAKDNA6NC62 111 aa9.15□□□□□ -0.94
POLR2J3-211ENST00000506060 C2orf70A6NJV1 201 aa9.15□□□□□ -0.94
POLR2J3-211ENST00000506060 CCL24O00175 119 aa9.15□□□□□ -0.94
POLR2J3-211ENST00000506060 ISLRO14498 428 aa9.15□□□□□ -0.94
POLR2J3-211ENST00000506060 MGST1P10620 155 aaKnown RBP9.15□□□□□ -0.94
POLR2J3-211ENST00000506060 FLI1Q01543 452 aaPredicted RBP9.15□□□□□ -0.94
POLR2J3-211ENST00000506060 PSG3Q16557 428 aa9.15□□□□□ -0.94
POLR2J3-211ENST00000506060 RNF212Q495C1 297 aa9.15□□□□□ -0.94
POLR2J3-211ENST00000506060 LCN12Q6JVE5 192 aa9.15□□□□□ -0.94
POLR2J3-211ENST00000506060 TMEM88Q6PEY1 159 aa9.15□□□□□ -0.94
POLR2J3-211ENST00000506060 OR10G8Q8NGN5 311 aa9.15□□□□□ -0.94
POLR2J3-211ENST00000506060 SFRP2Q96HF1 295 aa9.15□□□□□ -0.94
POLR2J3-211ENST00000506060 BTF3L4Q96K17 158 aa9.15□□□□□ -0.94
POLR2J3-211ENST00000506060 CITED2Q99967 270 aaPredicted RBP9.15□□□□□ -0.94
POLR2J3-211ENST00000506060 NDFIP1Q9BT67 221 aa9.15□□□□□ -0.94
POLR2J3-211ENST00000506060 MLXQ9UH92 298 aa9.15□□□□□ -0.94
POLR2J3-211ENST00000506060 A0A1W2PRX2 142 aa9.14□□□□□ -0.95
POLR2J3-211ENST00000506060 DNASE2O00115 360 aaPredicted RBP9.14□□□□□ -0.95
POLR2J3-211ENST00000506060 GCGP01275 180 aa9.14□□□□□ -0.95
POLR2J3-211ENST00000506060 LTAP01374 205 aa9.14□□□□□ -0.95
POLR2J3-211ENST00000506060 CBLN1P23435 193 aa9.14□□□□□ -0.95
POLR2J3-211ENST00000506060 SLURP1P55000 103 aa9.14□□□□□ -0.95
POLR2J3-211ENST00000506060 DEFB136Q30KP8 78 aa9.14□□□□□ -0.95
POLR2J3-211ENST00000506060 SAPCD1Q5SSQ6 148 aa9.14□□□□□ -0.95
POLR2J3-211ENST00000506060 KCNIP4Q6PIL6 250 aa9.14□□□□□ -0.95
POLR2J3-211ENST00000506060 C18orf65Q6ZTR6 163 aa9.14□□□□□ -0.95
POLR2J3-211ENST00000506060 Q86TA4 180 aa9.14□□□□□ -0.95
POLR2J3-211ENST00000506060 NDUFA11Q86Y39 141 aa9.14□□□□□ -0.95
POLR2J3-211ENST00000506060 CBLN2Q8IUK8 224 aa9.14□□□□□ -0.95
POLR2J3-211ENST00000506060 OR9G4Q8NGQ1 327 aa9.14□□□□□ -0.95
POLR2J3-211ENST00000506060 M0R3E3 92 aa9.13□□□□□ -0.95
POLR2J3-211ENST00000506060 OVOL1O14753 267 aa9.13□□□□□ -0.95
POLR2J3-211ENST00000506060 FOLR2P14207 255 aa9.13□□□□□ -0.95
POLR2J3-211ENST00000506060 ERVFC1-1P60608 527 aa9.13□□□□□ -0.95
POLR2J3-211ENST00000506060 SNRPD3P62318 126 aaKnown RBP9.13□□□□□ -0.95
POLR2J3-211ENST00000506060 RPL19P84098 196 aaKnown RBP9.13□□□□□ -0.95
POLR2J3-211ENST00000506060 FHL3Q13643 280 aa9.13□□□□□ -0.95
POLR2J3-211ENST00000506060 PRNTQ86SH4 94 aa9.13□□□□□ -0.95
POLR2J3-211ENST00000506060 C11orf44Q8N8P7 122 aa9.13□□□□□ -0.95
POLR2J3-211ENST00000506060 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.13□□□□□ -0.95
POLR2J3-211ENST00000506060 ZNF738Q8NE65 137 aa9.13□□□□□ -0.95
POLR2J3-211ENST00000506060 DYNLRB2Q8TF09 96 aa9.13□□□□□ -0.95
POLR2J3-211ENST00000506060 DAZAP1Q96EP5 407 aaKnown RBP9.13□□□□□ -0.95
POLR2J3-211ENST00000506060 RAX2Q96IS3 184 aa9.13□□□□□ -0.95
POLR2J3-211ENST00000506060 LINC00479Q96M42 142 aa9.13□□□□□ -0.95
POLR2J3-211ENST00000506060 OSTCQ9NRP0 149 aa9.13□□□□□ -0.95
POLR2J3-211ENST00000506060 PSG8Q9UQ74 426 aa9.13□□□□□ -0.95
POLR2J3-211ENST00000506060 PGPEP1LA6NFU8 196 aa9.12□□□□□ -0.95
POLR2J3-211ENST00000506060 CT45A10P0DMU9 189 aa9.12□□□□□ -0.95
POLR2J3-211ENST00000506060 TMEM78Q5T7P6 136 aa9.12□□□□□ -0.95
POLR2J3-211ENST00000506060 FAM231DQ6ZW35 169 aa9.12□□□□□ -0.95
POLR2J3-211ENST00000506060 TMEM183AQ8IXX5 376 aa9.12□□□□□ -0.95
POLR2J3-211ENST00000506060 OR10J6PQ8NGY7 276 aa9.12□□□□□ -0.95
POLR2J3-211ENST00000506060 IMMP2LQ96T52 175 aa9.12□□□□□ -0.95
POLR2J3-211ENST00000506060 AURKAIP1Q9NWT8 199 aaPredicted RBP9.12□□□□□ -0.95
POLR2J3-211ENST00000506060 TRAV2A0A0B4J234 112 aa9.11□□□□□ -0.95
POLR2J3-211ENST00000506060 K7EN84 100 aa9.11□□□□□ -0.95
POLR2J3-211ENST00000506060 IBA57Q5T440 356 aaKnown RBP9.11□□□□□ -0.95
POLR2J3-211ENST00000506060 RBPMS2Q6ZRY4 209 aaKnown RBP9.11□□□□□ -0.95
POLR2J3-211ENST00000506060 RNF182Q8N6D2 247 aa9.11□□□□□ -0.95
POLR2J3-211ENST00000506060 DLX4Q92988 240 aaPredicted RBP9.11□□□□□ -0.95
POLR2J3-211ENST00000506060 ZNF492Q9P255 531 aa9.11□□□□□ -0.95
POLR2J3-211ENST00000506060 NF1P21359 2839 aa9.11□□□□□ -0.95
POLR2J3-211ENST00000506060 C2CD3Q4AC94 2353 aa9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 SETD2Q9BYW2 2564 aaPredicted RBP9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 IGKV3-7A0A075B6H7 116 aa9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 IGKV2-40A0A087WW87 121 aaPredicted RBP9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 TRAV8-1A0A0A6YYK1 113 aa9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 TRAV8-2A0A0B4J237 113 aa9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 TRAV25A0A0B4J276 109 aa9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 SOCS3O14543 225 aa9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 GATCO43716 136 aaKnown RBP9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 IGKV2D-40P01614 121 aaPredicted RBP9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 IGLV2-8P01709 118 aa9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 NSUN5P1Q3KNT7 163 aa9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 IGFL4Q6B9Z1 124 aa9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 GBGT1Q8N5D6 347 aa9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 SGK494Q96LW2 274 aa9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 LINC00477Q96M19 166 aa9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 DUX3Q96PT4 197 aa9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 MLST8Q9BVC4 326 aa9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 MS4A6AQ9H2W1 248 aa9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 SIGLEC8Q9NYZ4 499 aa9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 LENEPQ9Y5L5 61 aa9.1□□□□□ -0.95
POLR2J3-211ENST00000506060 TRAV9-1A0A075B6T8 112 aa9.09□□□□□ -0.95
POLR2J3-211ENST00000506060 ZNF705GA8MUZ8 300 aaPredicted RBP9.09□□□□□ -0.95
POLR2J3-211ENST00000506060 ZNF705FA8MVS1 300 aaPredicted RBP9.09□□□□□ -0.95
POLR2J3-211ENST00000506060 IGLV2-11P01706 119 aa9.09□□□□□ -0.95
POLR2J3-211ENST00000506060 P01737 135 aa9.09□□□□□ -0.95
POLR2J3-211ENST00000506060 CSN3P07498 182 aa9.09□□□□□ -0.95
POLR2J3-211ENST00000506060 HLA-DMBP28068 263 aa9.09□□□□□ -0.95
POLR2J3-211ENST00000506060 ZNF138P52744 262 aa9.09□□□□□ -0.95
POLR2J3-211ENST00000506060 OR5I1Q13606 314 aa9.09□□□□□ -0.95
POLR2J3-211ENST00000506060 PRR27Q6MZM9 219 aa9.09□□□□□ -0.95
POLR2J3-211ENST00000506060 C9orf47Q6ZRZ4 202 aa9.09□□□□□ -0.95
POLR2J3-211ENST00000506060 NHLRC2Q8NBF2 726 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms