RNA–Protein interactions for RNA: ENST00000505690.1

SPOCK1-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 2

Gene SPOCK1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-204ENST00000505690 ZNF705DP0CH99 300 aaPredicted RBP16.79■□□□□ 0.28
SPOCK1-204ENST00000505690 ZNF705BP0CI00 300 aaPredicted RBP16.79■□□□□ 0.28
SPOCK1-204ENST00000505690 ARL14EPLP0DKL9 152 aa16.79■□□□□ 0.28
SPOCK1-204ENST00000505690 PRB4P10163 310 aaPredicted RBP16.79■□□□□ 0.28
SPOCK1-204ENST00000505690 C4BPBP20851 252 aa16.79■□□□□ 0.28
SPOCK1-204ENST00000505690 NUTF2P61970 127 aaKnown RBP16.79■□□□□ 0.28
SPOCK1-204ENST00000505690 DEFB135Q30KP9 77 aa16.79■□□□□ 0.28
SPOCK1-204ENST00000505690 SSX7Q7RTT5 188 aa16.79■□□□□ 0.28
SPOCK1-204ENST00000505690 EXOC3-AS1Q8N2X6 119 aa16.79■□□□□ 0.28
SPOCK1-204ENST00000505690 OR8A1Q8NGG7 326 aa16.79■□□□□ 0.28
SPOCK1-204ENST00000505690 MRPL53Q96EL3 112 aaKnown RBP16.79■□□□□ 0.28
SPOCK1-204ENST00000505690 RCHY1Q96PM5 261 aa16.79■□□□□ 0.28
SPOCK1-204ENST00000505690 PRELID1Q9Y255 219 aa16.79■□□□□ 0.28
SPOCK1-204ENST00000505690 CTXND1A0A1B0GTU2 59 aa16.78■□□□□ 0.28
SPOCK1-204ENST00000505690 CNN1P51911 297 aaKnown RBP16.78■□□□□ 0.28
SPOCK1-204ENST00000505690 HIST1H1AQ02539 215 aaPredicted RBP16.78■□□□□ 0.28
SPOCK1-204ENST00000505690 ZNF726P1Q15940 193 aa16.78■□□□□ 0.28
SPOCK1-204ENST00000505690 A8MTW9 85 aa16.77■□□□□ 0.28
SPOCK1-204ENST00000505690 M0R3E3 92 aa16.77■□□□□ 0.28
SPOCK1-204ENST00000505690 GIG44P09565 113 aaPredicted RBP16.77■□□□□ 0.28
SPOCK1-204ENST00000505690 ICAM4Q14773 271 aa16.77■□□□□ 0.28
SPOCK1-204ENST00000505690 OVOL2Q9BRP0 275 aa16.77■□□□□ 0.28
SPOCK1-204ENST00000505690 PLA2G2EQ9NZK7 142 aa16.77■□□□□ 0.28
SPOCK1-204ENST00000505690 TP53TG1Q9Y2A0 90 aa16.77■□□□□ 0.28
SPOCK1-204ENST00000505690 UMAD1C9J7I0 102 aa16.76■□□□□ 0.27
SPOCK1-204ENST00000505690 PRAC2D3DTV9 90 aa16.76■□□□□ 0.27
SPOCK1-204ENST00000505690 SPRY2O43597 315 aa16.76■□□□□ 0.27
SPOCK1-204ENST00000505690 CXorf1O96002 111 aa16.76■□□□□ 0.27
SPOCK1-204ENST00000505690 GCHFRP30047 84 aa16.76■□□□□ 0.27
SPOCK1-204ENST00000505690 RANP62826 216 aaKnown RBP16.76■□□□□ 0.27
SPOCK1-204ENST00000505690 SLC51BQ86UW2 128 aa16.76■□□□□ 0.27
SPOCK1-204ENST00000505690 LYPD1Q8N2G4 141 aa16.76■□□□□ 0.27
SPOCK1-204ENST00000505690 TMED6Q8WW62 240 aa16.76■□□□□ 0.27
SPOCK1-204ENST00000505690 RNF183Q96D59 192 aa16.76■□□□□ 0.27
SPOCK1-204ENST00000505690 Q9H3A6 140 aa16.75■□□□□ 0.27
SPOCK1-204ENST00000505690 NKX2-5P52952 324 aaPredicted RBP16.74■□□□□ 0.27
SPOCK1-204ENST00000505690 FXYD7P58549 80 aa16.74■□□□□ 0.27
SPOCK1-204ENST00000505690 AMTNQ6UX39 209 aa16.74■□□□□ 0.27
SPOCK1-204ENST00000505690 OR10J6PQ8NGY7 276 aa16.74■□□□□ 0.27
SPOCK1-204ENST00000505690 C1QTNF4Q9BXJ3 329 aa16.74■□□□□ 0.27
SPOCK1-204ENST00000505690 SLC35B3Q9H1N7 401 aa16.74■□□□□ 0.27
SPOCK1-204ENST00000505690 EIF5AL1Q6IS14 154 aaKnown RBP16.73■□□□□ 0.27
SPOCK1-204ENST00000505690 SUN5Q8TC36 379 aa16.73■□□□□ 0.27
SPOCK1-204ENST00000505690 TMEM167BQ9NRX6 74 aa16.73■□□□□ 0.27
SPOCK1-204ENST00000505690 XCL2Q9UBD3 114 aa16.73■□□□□ 0.27
SPOCK1-204ENST00000505690 MAP1LC3B2A6NCE7 125 aa16.72■□□□□ 0.27
SPOCK1-204ENST00000505690 FHITP49789 147 aa16.72■□□□□ 0.27
SPOCK1-204ENST00000505690 IQCF2Q8IXL9 164 aa16.72■□□□□ 0.27
SPOCK1-204ENST00000505690 FAM213BQ8TBF2 198 aa16.72■□□□□ 0.27
SPOCK1-204ENST00000505690 MAP1LC3BQ9GZQ8 125 aa16.72■□□□□ 0.27
SPOCK1-204ENST00000505690 OTORQ9NRC9 128 aa16.72■□□□□ 0.27
SPOCK1-204ENST00000505690 FGF8P55075 233 aaPredicted RBP16.71■□□□□ 0.27
SPOCK1-204ENST00000505690 DPPA3Q6W0C5 159 aa16.71■□□□□ 0.27
SPOCK1-204ENST00000505690 CSNK1G2-AS1Q8NCQ2 148 aa16.71■□□□□ 0.27
SPOCK1-204ENST00000505690 PPP1R14DQ9NXH3 145 aa16.71■□□□□ 0.27
SPOCK1-204ENST00000505690 PGPA6NDG6 321 aa16.7■□□□□ 0.26
SPOCK1-204ENST00000505690 NPIPB6E9PJ23 425 aa16.7■□□□□ 0.26
SPOCK1-204ENST00000505690 CSN1S1P47710 185 aa16.7■□□□□ 0.26
SPOCK1-204ENST00000505690 FAM74A1Q5RGS3 127 aa16.7■□□□□ 0.26
SPOCK1-204ENST00000505690 HUWE1Q7Z6Z7 4374 aaKnown RBP16.69■□□□□ 0.26
SPOCK1-204ENST00000505690 BOLA2-SMG1P6H3BVE0 249 aa16.69■□□□□ 0.26
SPOCK1-204ENST00000505690 SPINK13Q1W4C9 94 aa16.69■□□□□ 0.26
SPOCK1-204ENST00000505690 RXFP4Q8TDU9 374 aa16.69■□□□□ 0.26
SPOCK1-204ENST00000505690 TMPRSS5Q9H3S3 457 aa16.69■□□□□ 0.26
SPOCK1-204ENST00000505690 TGP01266 2768 aa16.68■□□□□ 0.26
SPOCK1-204ENST00000505690 AMBPP02760 352 aa16.68■□□□□ 0.26
SPOCK1-204ENST00000505690 OR11H2Q8NH07 326 aa16.68■□□□□ 0.26
SPOCK1-204ENST00000505690 MBD3L1Q8WWY6 194 aa16.68■□□□□ 0.26
SPOCK1-204ENST00000505690 RARRES2Q99969 163 aa16.68■□□□□ 0.26
SPOCK1-204ENST00000505690 COL7A1Q02388 2944 aa16.67■□□□□ 0.26
SPOCK1-204ENST00000505690 IGKV2-40A0A087WW87 121 aaPredicted RBP16.67■□□□□ 0.26
SPOCK1-204ENST00000505690 M0R2Z0 102 aa16.67■□□□□ 0.26
SPOCK1-204ENST00000505690 IGKV2D-40P01614 121 aaPredicted RBP16.67■□□□□ 0.26
SPOCK1-204ENST00000505690 RAB5CP51148 216 aa16.67■□□□□ 0.26
SPOCK1-204ENST00000505690 ERCC8Q13216 396 aa16.67■□□□□ 0.26
SPOCK1-204ENST00000505690 CMTM2Q8TAZ6 248 aa16.67■□□□□ 0.26
SPOCK1-204ENST00000505690 SULT1A2P50226 295 aa16.66■□□□□ 0.26
SPOCK1-204ENST00000505690 C9orf47Q6ZRZ4 202 aa16.66■□□□□ 0.26
SPOCK1-204ENST00000505690 SFT2D1Q8WV19 159 aa16.66■□□□□ 0.26
SPOCK1-204ENST00000505690 LINC00477Q96M19 166 aa16.66■□□□□ 0.26
SPOCK1-204ENST00000505690 BOLA1Q9Y3E2 137 aa16.66■□□□□ 0.26
SPOCK1-204ENST00000505690 DIRC3C9JPN6 131 aa16.65■□□□□ 0.26
SPOCK1-204ENST00000505690 CT45A10P0DMU9 189 aa16.65■□□□□ 0.26
SPOCK1-204ENST00000505690 ARL6IP6Q8N6S5 226 aa16.65■□□□□ 0.26
SPOCK1-204ENST00000505690 IGF2BP2-AS1Q96M15 143 aa16.65■□□□□ 0.26
SPOCK1-204ENST00000505690 ODF3Q96PU9 254 aa16.65■□□□□ 0.26
SPOCK1-204ENST00000505690 VGLL1Q99990 258 aa16.65■□□□□ 0.26
SPOCK1-204ENST00000505690 AGPAT4-IT1Q9H0P7 198 aa16.65■□□□□ 0.26
SPOCK1-204ENST00000505690 A0A1W2PRE2 83 aa16.64■□□□□ 0.25
SPOCK1-204ENST00000505690 RBAKDNA6NC62 111 aa16.64■□□□□ 0.25
SPOCK1-204ENST00000505690 ZNF705EA8MWA4 302 aaPredicted RBP16.64■□□□□ 0.25
SPOCK1-204ENST00000505690 CRXO43186 299 aaPredicted RBP16.64■□□□□ 0.25
SPOCK1-204ENST00000505690 SLC25A5P05141 298 aaKnown RBP16.64■□□□□ 0.25
SPOCK1-204ENST00000505690 H2AFB1P0C5Y9 115 aa16.64■□□□□ 0.25
SPOCK1-204ENST00000505690 CDKN1BP46527 198 aa16.64■□□□□ 0.25
SPOCK1-204ENST00000505690 RPH3ALQ9UNE2 315 aa16.64■□□□□ 0.25
SPOCK1-204ENST00000505690 TRAV12-2A0A075B6T6 113 aa16.63■□□□□ 0.25
SPOCK1-204ENST00000505690 GGTLC3B5MD39 225 aa16.63■□□□□ 0.25
SPOCK1-204ENST00000505690 INSP01308 110 aa16.63■□□□□ 0.25
SPOCK1-204ENST00000505690 TSPOP30536 169 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms