RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 KDM6AO15550 1401 aaPredicted RBP0.89□□□□□ -2.27
CHD1-203ENST00000505657 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.89□□□□□ -2.27
CHD1-203ENST00000505657 VIRMAQ69YN4 1812 aaKnown RBP0.89□□□□□ -2.27
CHD1-203ENST00000505657 CITO14578 2027 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 CECR2Q9BXF3 1484 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 TRAV5A0A0B4J249 113 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 C9orf170A2RU37 121 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 C5orf67F2Z3F1 127 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 F8W1H4 67 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 M0R2N4 97 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 INE1O15225 51 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 PFDN1O60925 122 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 CXCL8P10145 99 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 HRCT1Q6UXD1 115 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 TEN1Q86WV5 123 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 LRRC18Q8N456 261 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 FAM216BQ8N7L0 139 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 MRPL57Q9BQC6 102 aaKnown RBP0.89□□□□□ -2.27
CHD1-203ENST00000505657 EFCAB11Q9BUY7 163 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 LRTM1Q9HBL6 345 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 TAF9BQ9HBM6 251 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 LAMTOR3Q9UHA4 124 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 NAT8BQ9UHF3 227 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 ASCC3Q8N3C0 2202 aaKnown RBP0.89□□□□□ -2.27
CHD1-203ENST00000505657 TET1Q8NFU7 2136 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 NISCHQ9Y2I1 1504 aa0.89□□□□□ -2.27
CHD1-203ENST00000505657 ADGRB2O60241 1585 aa0.88□□□□□ -2.27
CHD1-203ENST00000505657 LAMA4Q16363 1823 aa0.88□□□□□ -2.27
CHD1-203ENST00000505657 KIAA1549LQ6ZVL6 1849 aa0.88□□□□□ -2.27
CHD1-203ENST00000505657 IGHV1-58A0A0C4DH39 117 aa0.88□□□□□ -2.27
CHD1-203ENST00000505657 E7EQ34 232 aa0.88□□□□□ -2.27
CHD1-203ENST00000505657 KPNA4O00629 521 aaPredicted RBP0.88□□□□□ -2.27
CHD1-203ENST00000505657 BCL2P10415 239 aa0.88□□□□□ -2.27
CHD1-203ENST00000505657 TFAMQ00059 246 aaKnown RBP0.88□□□□□ -2.27
CHD1-203ENST00000505657 PHF5AQ7RTV0 110 aaKnown RBP0.88□□□□□ -2.27
CHD1-203ENST00000505657 ARPINQ7Z6K5 226 aa0.88□□□□□ -2.27
CHD1-203ENST00000505657 TEX29Q8N6K0 151 aa0.88□□□□□ -2.27
CHD1-203ENST00000505657 ISOC1Q96CN7 298 aa0.88□□□□□ -2.27
CHD1-203ENST00000505657 TRAPPC2LQ9UL33 140 aa0.88□□□□□ -2.27
CHD1-203ENST00000505657 USP54Q70EL1 1684 aa0.88□□□□□ -2.27
CHD1-203ENST00000505657 RTL9Q8NET4 1388 aa0.87□□□□□ -2.27
CHD1-203ENST00000505657 TRAV27A0A087WT01 109 aa0.87□□□□□ -2.27
CHD1-203ENST00000505657 H3BRM9 83 aa0.87□□□□□ -2.27
CHD1-203ENST00000505657 LYRM1O43325 122 aa0.87□□□□□ -2.27
CHD1-203ENST00000505657 RPL7P18124 248 aaKnown RBP0.87□□□□□ -2.27
CHD1-203ENST00000505657 S100GP29377 79 aa0.87□□□□□ -2.27
CHD1-203ENST00000505657 SDC2P34741 201 aa0.87□□□□□ -2.27
CHD1-203ENST00000505657 CIRBPQ14011 172 aaKnown RBP0.87□□□□□ -2.27
CHD1-203ENST00000505657 SAMD13Q5VXD3 122 aa0.87□□□□□ -2.27
CHD1-203ENST00000505657 KRTAP5-10Q6L8G5 202 aa0.87□□□□□ -2.27
CHD1-203ENST00000505657 OR5AS1Q8N127 324 aa0.87□□□□□ -2.27
CHD1-203ENST00000505657 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.87□□□□□ -2.27
CHD1-203ENST00000505657 OR5H6Q8NGV6 325 aa0.87□□□□□ -2.27
CHD1-203ENST00000505657 THEM6Q8WUY1 208 aa0.87□□□□□ -2.27
CHD1-203ENST00000505657 LINC00526Q96FQ7 95 aa0.87□□□□□ -2.27
CHD1-203ENST00000505657 TMEM138Q9NPI0 162 aa0.87□□□□□ -2.27
CHD1-203ENST00000505657 NIT2Q9NQR4 276 aa0.87□□□□□ -2.27
CHD1-203ENST00000505657 TMEM14CQ9P0S9 112 aa0.87□□□□□ -2.27
CHD1-203ENST00000505657 LAMTOR2Q9Y2Q5 125 aa0.87□□□□□ -2.27
CHD1-203ENST00000505657 NDUFAF1Q9Y375 327 aa0.87□□□□□ -2.27
CHD1-203ENST00000505657 TRAPPC8Q9Y2L5 1435 aa0.87□□□□□ -2.27
CHD1-203ENST00000505657 ATG2AQ2TAZ0 1938 aa0.86□□□□□ -2.27
CHD1-203ENST00000505657 A0A087WSZ3 146 aa0.86□□□□□ -2.27
CHD1-203ENST00000505657 GNG14A0A1W2PPG7 69 aa0.86□□□□□ -2.27
CHD1-203ENST00000505657 VMA21Q3ZAQ7 101 aa0.86□□□□□ -2.27
CHD1-203ENST00000505657 TMEM128Q5BJH2 165 aa0.86□□□□□ -2.27
CHD1-203ENST00000505657 KRTAP26-1Q6PEX3 210 aa0.86□□□□□ -2.27
CHD1-203ENST00000505657 LINC00322Q6ZN03 302 aaPredicted RBP0.86□□□□□ -2.27
CHD1-203ENST00000505657 ZNF431Q8TF32 576 aaPredicted RBP0.86□□□□□ -2.27
CHD1-203ENST00000505657 DDA1Q9BW61 102 aa0.86□□□□□ -2.27
CHD1-203ENST00000505657 TCEAL2Q9H3H9 227 aaPredicted RBP0.86□□□□□ -2.27
CHD1-203ENST00000505657 TPRKBQ9Y3C4 175 aa0.86□□□□□ -2.27
CHD1-203ENST00000505657 MED31Q9Y3C7 131 aa0.86□□□□□ -2.27
CHD1-203ENST00000505657 DLC1Q96QB1 1528 aa0.85□□□□□ -2.27
CHD1-203ENST00000505657 C5orf58C9J3I9 102 aa0.85□□□□□ -2.27
CHD1-203ENST00000505657 TSTD3H0UI37 97 aa0.85□□□□□ -2.27
CHD1-203ENST00000505657 NUPR1O60356 82 aa0.85□□□□□ -2.27
CHD1-203ENST00000505657 FABP4P15090 132 aa0.85□□□□□ -2.27
CHD1-203ENST00000505657 COX7CP15954 63 aa0.85□□□□□ -2.27
CHD1-203ENST00000505657 POLR2HP52434 150 aaKnown RBP0.85□□□□□ -2.27
CHD1-203ENST00000505657 NDUFA6P56556 154 aa0.85□□□□□ -2.27
CHD1-203ENST00000505657 PSG9Q00887 426 aa0.85□□□□□ -2.27
CHD1-203ENST00000505657 DR1Q01658 176 aa0.85□□□□□ -2.27
CHD1-203ENST00000505657 LINC00305Q7Z4B0 112 aa0.85□□□□□ -2.27
CHD1-203ENST00000505657 OR4B1Q8NGF8 309 aa0.85□□□□□ -2.27
CHD1-203ENST00000505657 MED12Q93074 2177 aa0.85□□□□□ -2.27
CHD1-203ENST00000505657 PRELID3AQ96N28 172 aa0.85□□□□□ -2.27
CHD1-203ENST00000505657 CCDC115Q96NT0 180 aa0.85□□□□□ -2.27
CHD1-203ENST00000505657 OR4C12Q96R67 309 aa0.85□□□□□ -2.27
CHD1-203ENST00000505657 HELZP42694 1942 aaKnown RBP0.85□□□□□ -2.27
CHD1-203ENST00000505657 TCOF1Q13428 1488 aaKnown RBP0.85□□□□□ -2.27
CHD1-203ENST00000505657 A0A096LPI6 279 aa0.84□□□□□ -2.27
CHD1-203ENST00000505657 FAM107AO95990 144 aa0.84□□□□□ -2.27
CHD1-203ENST00000505657 PPYP01298 95 aa0.84□□□□□ -2.27
CHD1-203ENST00000505657 RPS3P23396 243 aaKnown RBP eCLIP0.84□□□□□ -2.27
CHD1-203ENST00000505657 MIR22HGQ0VDD5 57 aa0.84□□□□□ -2.27
CHD1-203ENST00000505657 DIAPH2-AS1Q14236 149 aa0.84□□□□□ -2.27
CHD1-203ENST00000505657 DEFB115Q30KQ5 88 aa0.84□□□□□ -2.27
CHD1-203ENST00000505657 HAGHLQ6PII5 290 aaPredicted RBP0.84□□□□□ -2.27
CHD1-203ENST00000505657 DIRC1Q969H9 104 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms