RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 TMED6Q8WW62 240 aa13.38□□□□□ -0.27
DDR1-254ENST00000504679 MRPL53Q96EL3 112 aaKnown RBP13.38□□□□□ -0.27
DDR1-254ENST00000504679 CLUHP3Q96NS8 147 aa13.38□□□□□ -0.27
DDR1-254ENST00000504679 SPATA25Q9BR10 227 aa13.38□□□□□ -0.27
DDR1-254ENST00000504679 TM2D3Q9BRN9 247 aa13.38□□□□□ -0.27
DDR1-254ENST00000504679 ZNF705FA8MVS1 300 aaPredicted RBP13.37□□□□□ -0.27
DDR1-254ENST00000504679 IGKV3-20P01619 116 aa13.37□□□□□ -0.27
DDR1-254ENST00000504679 ICAM4Q14773 271 aa13.37□□□□□ -0.27
DDR1-254ENST00000504679 Q6ZWC4 215 aa13.37□□□□□ -0.27
DDR1-254ENST00000504679 EXOC3-AS1Q8N2X6 119 aa13.37□□□□□ -0.27
DDR1-254ENST00000504679 GCHFRP30047 84 aa13.36□□□□□ -0.27
DDR1-254ENST00000504679 ZNF726P1Q15940 193 aa13.36□□□□□ -0.27
DDR1-254ENST00000504679 DPPA3Q6W0C5 159 aa13.36□□□□□ -0.27
DDR1-254ENST00000504679 OR8A1Q8NGG7 326 aa13.36□□□□□ -0.27
DDR1-254ENST00000504679 OR10J6PQ8NGY7 276 aa13.36□□□□□ -0.27
DDR1-254ENST00000504679 TMEM167BQ9NRX6 74 aa13.36□□□□□ -0.27
DDR1-254ENST00000504679 PLA2G2EQ9NZK7 142 aa13.36□□□□□ -0.27
DDR1-254ENST00000504679 CA1P00915 261 aaPredicted RBP13.35□□□□□ -0.27
DDR1-254ENST00000504679 ZNF705DP0CH99 300 aaPredicted RBP13.35□□□□□ -0.27
DDR1-254ENST00000504679 ZNF705BP0CI00 300 aaPredicted RBP13.35□□□□□ -0.27
DDR1-254ENST00000504679 CNN1P51911 297 aaKnown RBP13.35□□□□□ -0.27
DDR1-254ENST00000504679 NKX2-5P52952 324 aaPredicted RBP13.35□□□□□ -0.27
DDR1-254ENST00000504679 FAM74A1Q5RGS3 127 aa13.35□□□□□ -0.27
DDR1-254ENST00000504679 SSX7Q7RTT5 188 aa13.35□□□□□ -0.27
DDR1-254ENST00000504679 IQCF2Q8IXL9 164 aa13.35□□□□□ -0.27
DDR1-254ENST00000504679 PHYHIPLQ96FC7 376 aa13.35□□□□□ -0.27
DDR1-254ENST00000504679 PPP1R14DQ9NXH3 145 aa13.35□□□□□ -0.27
DDR1-254ENST00000504679 CSN1S1P47710 185 aa13.34□□□□□ -0.27
DDR1-254ENST00000504679 RAB5CP51148 216 aa13.34□□□□□ -0.27
DDR1-254ENST00000504679 HIST1H1AQ02539 215 aaPredicted RBP13.34□□□□□ -0.27
DDR1-254ENST00000504679 FAM213BQ8TBF2 198 aa13.34□□□□□ -0.27
DDR1-254ENST00000504679 SUN5Q8TC36 379 aa13.34□□□□□ -0.27
DDR1-254ENST00000504679 C1QTNF4Q9BXJ3 329 aa13.34□□□□□ -0.27
DDR1-254ENST00000504679 Q9H3A6 140 aa13.34□□□□□ -0.27
DDR1-254ENST00000504679 MAP1LC3B2A6NCE7 125 aa13.33□□□□□ -0.28
DDR1-254ENST00000504679 PGPA6NDG6 321 aa13.33□□□□□ -0.28
DDR1-254ENST00000504679 PRAC2D3DTV9 90 aa13.33□□□□□ -0.28
DDR1-254ENST00000504679 M0R3E3 92 aa13.33□□□□□ -0.28
DDR1-254ENST00000504679 SPRY2O43597 315 aa13.33□□□□□ -0.28
DDR1-254ENST00000504679 FHITP49789 147 aa13.33□□□□□ -0.28
DDR1-254ENST00000504679 RXFP4Q8TDU9 374 aa13.33□□□□□ -0.28
DDR1-254ENST00000504679 RCHY1Q96PM5 261 aa13.33□□□□□ -0.28
DDR1-254ENST00000504679 MAP1LC3BQ9GZQ8 125 aa13.33□□□□□ -0.28
DDR1-254ENST00000504679 OTORQ9NRC9 128 aa13.33□□□□□ -0.28
DDR1-254ENST00000504679 TP53TG1Q9Y2A0 90 aa13.33□□□□□ -0.28
DDR1-254ENST00000504679 NBEAL2Q6ZNJ1 2754 aa13.32□□□□□ -0.28
DDR1-254ENST00000504679 COL7A1Q02388 2944 aa13.32□□□□□ -0.28
DDR1-254ENST00000504679 A8MTW9 85 aa13.32□□□□□ -0.28
DDR1-254ENST00000504679 FGF8P55075 233 aaPredicted RBP13.32□□□□□ -0.28
DDR1-254ENST00000504679 DEFB135Q30KP9 77 aa13.32□□□□□ -0.28
DDR1-254ENST00000504679 SFT2D1Q8WV19 159 aa13.32□□□□□ -0.28
DDR1-254ENST00000504679 MBD3L1Q8WWY6 194 aa13.32□□□□□ -0.28
DDR1-254ENST00000504679 RNF183Q96D59 192 aa13.32□□□□□ -0.28
DDR1-254ENST00000504679 U3KQK5 164 aa13.32□□□□□ -0.28
DDR1-254ENST00000504679 DNAH9Q9NYC9 4486 aa13.31□□□□□ -0.28
DDR1-254ENST00000504679 H2AFB1P0C5Y9 115 aa13.31□□□□□ -0.28
DDR1-254ENST00000504679 PRB4P10163 310 aaPredicted RBP13.31□□□□□ -0.28
DDR1-254ENST00000504679 CMTM2Q8TAZ6 248 aa13.31□□□□□ -0.28
DDR1-254ENST00000504679 TGP01266 2768 aa13.31□□□□□ -0.28
DDR1-254ENST00000504679 GIG44P09565 113 aaPredicted RBP13.3□□□□□ -0.28
DDR1-254ENST00000504679 SULT1A2P50226 295 aa13.3□□□□□ -0.28
DDR1-254ENST00000504679 FXYD7P58549 80 aa13.3□□□□□ -0.28
DDR1-254ENST00000504679 ARL6IP6Q8N6S5 226 aa13.3□□□□□ -0.28
DDR1-254ENST00000504679 LINC00477Q96M19 166 aa13.3□□□□□ -0.28
DDR1-254ENST00000504679 OVOL2Q9BRP0 275 aa13.3□□□□□ -0.28
DDR1-254ENST00000504679 SLC35B3Q9H1N7 401 aa13.3□□□□□ -0.28
DDR1-254ENST00000504679 TMPRSS5Q9H3S3 457 aa13.3□□□□□ -0.28
DDR1-254ENST00000504679 XCL2Q9UBD3 114 aa13.3□□□□□ -0.28
DDR1-254ENST00000504679 BOLA1Q9Y3E2 137 aa13.3□□□□□ -0.28
DDR1-254ENST00000504679 A0A1W2PRE2 83 aa13.29□□□□□ -0.28
DDR1-254ENST00000504679 AMBPP02760 352 aa13.29□□□□□ -0.28
DDR1-254ENST00000504679 AMTNQ6UX39 209 aa13.29□□□□□ -0.28
DDR1-254ENST00000504679 RETNQ9HD89 108 aa13.29□□□□□ -0.28
DDR1-254ENST00000504679 NPIPB6E9PJ23 425 aa13.28□□□□□ -0.28
DDR1-254ENST00000504679 TEX46H3BTG2 121 aa13.28□□□□□ -0.28
DDR1-254ENST00000504679 SUMO1P63165 101 aaKnown RBP13.28□□□□□ -0.28
DDR1-254ENST00000504679 C9orf47Q6ZRZ4 202 aa13.28□□□□□ -0.28
DDR1-254ENST00000504679 NKX6-2Q9C056 277 aaPredicted RBP13.28□□□□□ -0.28
DDR1-254ENST00000504679 DIRC3C9JPN6 131 aa13.27□□□□□ -0.29
DDR1-254ENST00000504679 SLC25A5P05141 298 aaKnown RBP13.27□□□□□ -0.29
DDR1-254ENST00000504679 TSPOP30536 169 aa13.27□□□□□ -0.29
DDR1-254ENST00000504679 TMEM78Q5T7P6 136 aa13.27□□□□□ -0.29
DDR1-254ENST00000504679 CSNK1G2-AS1Q8NCQ2 148 aa13.27□□□□□ -0.29
DDR1-254ENST00000504679 RARRES2Q99969 163 aa13.27□□□□□ -0.29
DDR1-254ENST00000504679 AGPAT4-IT1Q9H0P7 198 aa13.27□□□□□ -0.29
DDR1-254ENST00000504679 RBAKDNA6NC62 111 aa13.26□□□□□ -0.29
DDR1-254ENST00000504679 BOLA2-SMG1P6H3BVE0 249 aa13.26□□□□□ -0.29
DDR1-254ENST00000504679 UBE2G2P60604 165 aa13.26□□□□□ -0.29
DDR1-254ENST00000504679 ERCC8Q13216 396 aa13.26□□□□□ -0.29
DDR1-254ENST00000504679 SPINK13Q1W4C9 94 aa13.26□□□□□ -0.29
DDR1-254ENST00000504679 OR11H2Q8NH07 326 aa13.26□□□□□ -0.29
DDR1-254ENST00000504679 IGKV2-40A0A087WW87 121 aaPredicted RBP13.25□□□□□ -0.29
DDR1-254ENST00000504679 A0A1B0GV50 99 aa13.25□□□□□ -0.29
DDR1-254ENST00000504679 M0R2Z0 102 aa13.25□□□□□ -0.29
DDR1-254ENST00000504679 IGKV2D-40P01614 121 aaPredicted RBP13.25□□□□□ -0.29
DDR1-254ENST00000504679 HBE1P02100 147 aa13.25□□□□□ -0.29
DDR1-254ENST00000504679 CT45A10P0DMU9 189 aa13.25□□□□□ -0.29
DDR1-254ENST00000504679 CDKN1BP46527 198 aa13.25□□□□□ -0.29
DDR1-254ENST00000504679 PPT1P50897 306 aa13.25□□□□□ -0.29
DDR1-254ENST00000504679 ALKAL2Q6UX46 152 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms