RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 DTD1Q8TEA8 209 aa8.03□□□□□ -1.12
LSM6-204ENST00000504181 SHANK2-AS3Q9BTD1 123 aa8.03□□□□□ -1.12
LSM6-204ENST00000504181 COPZ2Q9P299 210 aa8.03□□□□□ -1.12
LSM6-204ENST00000504181 CRCT1Q9UGL9 99 aa8.03□□□□□ -1.12
LSM6-204ENST00000504181 A0A0J9YXV3 536 aa8.02□□□□□ -1.13
LSM6-204ENST00000504181 SLC25A5P05141 298 aaKnown RBP8.02□□□□□ -1.13
LSM6-204ENST00000504181 SDC2P34741 201 aa8.02□□□□□ -1.13
LSM6-204ENST00000504181 PRSS3P35030 304 aa8.02□□□□□ -1.13
LSM6-204ENST00000504181 FFAR4Q5NUL3 377 aa8.02□□□□□ -1.13
LSM6-204ENST00000504181 GPR107Q5VW38 600 aa8.02□□□□□ -1.13
LSM6-204ENST00000504181 SH2D6Q7Z4S9 175 aa8.02□□□□□ -1.13
LSM6-204ENST00000504181 ODF3Q96PU9 254 aa8.02□□□□□ -1.13
LSM6-204ENST00000504181 RBKSQ9H477 322 aa8.02□□□□□ -1.13
LSM6-204ENST00000504181 ZNF331Q9NQX6 463 aaPredicted RBP8.02□□□□□ -1.13
LSM6-204ENST00000504181 SSR3Q9UNL2 185 aa8.02□□□□□ -1.13
LSM6-204ENST00000504181 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.02□□□□□ -1.13
LSM6-204ENST00000504181 PMS2P5A8MQ11 134 aa8.01□□□□□ -1.13
LSM6-204ENST00000504181 PANO1I0J062 215 aa8.01□□□□□ -1.13
LSM6-204ENST00000504181 CDS2O95674 445 aa8.01□□□□□ -1.13
LSM6-204ENST00000504181 KRTAP10-8P60410 259 aa8.01□□□□□ -1.13
LSM6-204ENST00000504181 RAP2BP61225 183 aa8.01□□□□□ -1.13
LSM6-204ENST00000504181 SELENOHQ8IZQ5 122 aaKnown RBP8.01□□□□□ -1.13
LSM6-204ENST00000504181 CCDC71LQ8N9Z2 235 aa8.01□□□□□ -1.13
LSM6-204ENST00000504181 OR10P1Q8NGE3 313 aa8.01□□□□□ -1.13
LSM6-204ENST00000504181 OR10G4Q8NGN3 311 aa8.01□□□□□ -1.13
LSM6-204ENST00000504181 OR1S1Q8NH92 325 aa8.01□□□□□ -1.13
LSM6-204ENST00000504181 S100A16Q96FQ6 103 aaKnown RBP8.01□□□□□ -1.13
LSM6-204ENST00000504181 TMEM222Q9H0R3 208 aa8.01□□□□□ -1.13
LSM6-204ENST00000504181 HIGD1AQ9Y241 93 aa8.01□□□□□ -1.13
LSM6-204ENST00000504181 XP32Q5T750 250 aa8□□□□□ -1.13
LSM6-204ENST00000504181 LCN15Q6UWW0 184 aa8□□□□□ -1.13
LSM6-204ENST00000504181 DAZ4Q86SG3 579 aaKnown RBP8□□□□□ -1.13
LSM6-204ENST00000504181 DAZ3Q9NR90 486 aaKnown RBP8□□□□□ -1.13
LSM6-204ENST00000504181 PAIP2BQ9ULR5 123 aaKnown RBP8□□□□□ -1.13
LSM6-204ENST00000504181 COX11Q9Y6N1 276 aa8□□□□□ -1.13
LSM6-204ENST00000504181 IGKV2D-24A0A075B6R9 120 aa7.99□□□□□ -1.13
LSM6-204ENST00000504181 H3BTX0 84 aa7.99□□□□□ -1.13
LSM6-204ENST00000504181 SLC17A3O00476 420 aa7.99□□□□□ -1.13
LSM6-204ENST00000504181 RGS13O14921 159 aa7.99□□□□□ -1.13
LSM6-204ENST00000504181 MRPS12O15235 138 aaKnown RBP7.99□□□□□ -1.13
LSM6-204ENST00000504181 MPDU1O75352 247 aa7.99□□□□□ -1.13
LSM6-204ENST00000504181 OR5G3P0C626 314 aa7.99□□□□□ -1.13
LSM6-204ENST00000504181 SULT1A3P0DMM9 295 aa7.99□□□□□ -1.13
LSM6-204ENST00000504181 SULT1A4P0DMN0 295 aa7.99□□□□□ -1.13
LSM6-204ENST00000504181 ANXA7P20073 488 aaKnown RBP7.99□□□□□ -1.13
LSM6-204ENST00000504181 RNASE4P34096 147 aaKnown RBP7.99□□□□□ -1.13
LSM6-204ENST00000504181 TMEM268Q5VZI3 342 aa7.99□□□□□ -1.13
LSM6-204ENST00000504181 GLYATL2Q8WU03 294 aa7.99□□□□□ -1.13
LSM6-204ENST00000504181 ARPC5LQ9BPX5 153 aa7.99□□□□□ -1.13
LSM6-204ENST00000504181 SLC50A1Q9BRV3 221 aa7.99□□□□□ -1.13
LSM6-204ENST00000504181 CXCL2P19875 107 aa7.98□□□□□ -1.13
LSM6-204ENST00000504181 Q6ZQT7 251 aa7.98□□□□□ -1.13
LSM6-204ENST00000504181 LHFPL1Q86WI0 220 aa7.98□□□□□ -1.13
LSM6-204ENST00000504181 GPX8Q8TED1 209 aa7.98□□□□□ -1.13
LSM6-204ENST00000504181 DNAJC30Q96LL9 226 aa7.98□□□□□ -1.13
LSM6-204ENST00000504181 HSPB7Q9UBY9 170 aa7.98□□□□□ -1.13
LSM6-204ENST00000504181 FSIP2Q5CZC0 6907 aa7.97□□□□□ -1.13
LSM6-204ENST00000504181 TEX13DA0A0J9YY54 714 aaPredicted RBP7.97□□□□□ -1.13
LSM6-204ENST00000504181 KLLNB2CW77 178 aa7.97□□□□□ -1.13
LSM6-204ENST00000504181 GGTLC3B5MD39 225 aa7.97□□□□□ -1.13
LSM6-204ENST00000504181 HYPMO75409 117 aa7.97□□□□□ -1.13
LSM6-204ENST00000504181 B3GALNT1O75752 331 aa7.97□□□□□ -1.13
LSM6-204ENST00000504181 ATP5IP56385 69 aaPredicted RBP7.97□□□□□ -1.13
LSM6-204ENST00000504181 RAB11AP62491 216 aa7.97□□□□□ -1.13
LSM6-204ENST00000504181 TOR2AQ5JU69 321 aa7.97□□□□□ -1.13
LSM6-204ENST00000504181 UBE2NLQ5JXB2 153 aa7.97□□□□□ -1.13
LSM6-204ENST00000504181 FAM122CQ6P4D5 195 aa7.97□□□□□ -1.13
LSM6-204ENST00000504181 OR13C8Q8NGS7 320 aa7.97□□□□□ -1.13
LSM6-204ENST00000504181 RMI2Q96E14 147 aa7.97□□□□□ -1.13
LSM6-204ENST00000504181 IGHV1OR15-1A0A075B7D0 117 aa7.96□□□□□ -1.14
LSM6-204ENST00000504181 TRAV8-1A0A0A6YYK1 113 aa7.96□□□□□ -1.14
LSM6-204ENST00000504181 IGHV3-16A0A0C4DH30 117 aa7.96□□□□□ -1.14
LSM6-204ENST00000504181 AKR1C1Q04828 323 aa7.96□□□□□ -1.14
LSM6-204ENST00000504181 ERCC8Q13216 396 aa7.96□□□□□ -1.14
LSM6-204ENST00000504181 WDR73Q6P4I2 378 aa7.96□□□□□ -1.14
LSM6-204ENST00000504181 ACOT7LQ6ZUV0 252 aa7.96□□□□□ -1.14
LSM6-204ENST00000504181 ZFAND1Q8TCF1 268 aa7.96□□□□□ -1.14
LSM6-204ENST00000504181 CACFD1Q9UGQ2 172 aa7.96□□□□□ -1.14
LSM6-204ENST00000504181 TRAV4A0A0B4J268 109 aa7.95□□□□□ -1.14
LSM6-204ENST00000504181 TNFAIP8O95379 198 aa7.95□□□□□ -1.14
LSM6-204ENST00000504181 IL5P05113 134 aa7.95□□□□□ -1.14
LSM6-204ENST00000504181 PFN1P07737 140 aaKnown RBP7.95□□□□□ -1.14
LSM6-204ENST00000504181 OR4E1P0C645 316 aa7.95□□□□□ -1.14
LSM6-204ENST00000504181 IAPPP10997 89 aa7.95□□□□□ -1.14
LSM6-204ENST00000504181 OPCMLQ14982 345 aa7.95□□□□□ -1.14
LSM6-204ENST00000504181 CYP2G1PQ6ZSU1 146 aa7.95□□□□□ -1.14
LSM6-204ENST00000504181 MARCH1Q8TCQ1 289 aa7.95□□□□□ -1.14
LSM6-204ENST00000504181 GPX1P07203 203 aa7.94□□□□□ -1.14
LSM6-204ENST00000504181 LINC00869P0C866 280 aa7.94□□□□□ -1.14
LSM6-204ENST00000504181 C14orf177Q52M58 125 aa7.94□□□□□ -1.14
LSM6-204ENST00000504181 PRR9Q5T870 116 aa7.94□□□□□ -1.14
LSM6-204ENST00000504181 SNX29P2Q8IUI4 249 aa7.94□□□□□ -1.14
LSM6-204ENST00000504181 SAMD12Q8N8I0 201 aa7.94□□□□□ -1.14
LSM6-204ENST00000504181 OR4C5Q8NGB2 326 aa7.94□□□□□ -1.14
LSM6-204ENST00000504181 NAA60Q9H7X0 242 aa7.94□□□□□ -1.14
LSM6-204ENST00000504181 PRR13Q9NZ81 148 aa7.94□□□□□ -1.14
LSM6-204ENST00000504181 KIF25-AS1Q9Y6Z4 181 aa7.94□□□□□ -1.14
LSM6-204ENST00000504181 FABP12A6NFH5 140 aa7.93□□□□□ -1.14
LSM6-204ENST00000504181 PRSS46E5RG02 174 aa7.93□□□□□ -1.14
LSM6-204ENST00000504181 PHOX2AO14813 284 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms