RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 PRSS22Q9GZN4 317 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 GNG12Q9UBI6 72 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 RFNGQ9Y644 331 aa2.24□□□□□ -2.05
NEDD4-204ENST00000503468 AGRNO00468 2067 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 UQCRQO14949 82 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 GFRA3O60609 400 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 LMX1BO60663 402 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 PRSS1P07477 247 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 TMEM78Q5T7P6 136 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 RBMXL3Q8N7X1 1067 aaKnown RBP2.23□□□□□ -2.05
NEDD4-204ENST00000503468 RCHY1Q96PM5 261 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 FOXB1Q99853 325 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 EMC6Q9BV81 110 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 FOXQ1Q9C009 403 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 ZNF576Q9H609 170 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 DYNLRB1Q9NP97 96 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 RARRES3Q9UL19 164 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 PSG8Q9UQ74 426 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 CR1P17927 2039 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.23□□□□□ -2.05
NEDD4-204ENST00000503468 NGFP01138 241 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 CDAP32320 146 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 MIC13Q5XKP0 118 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 PLXDC1Q8IUK5 500 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 ZNF581Q9P0T4 197 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 PCLOQ9Y6V0 5065 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 CRYBG3Q68DQ2 2970 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 TRBV25-1A0A075B6N4 114 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 ZNF688P0C7X2 276 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 NDUFV3P56181 108 aaKnown RBP2.23□□□□□ -2.05
NEDD4-204ENST00000503468 CD69Q07108 199 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 ZC2HC1BQ5TFG8 222 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 SHISA2Q6UWI4 295 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 AMN1Q8IY45 258 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 YAF2Q8IY57 180 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 OR13H1Q8NG92 308 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 CYB5D2Q8WUJ1 264 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 CFHR4Q92496 578 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 LINC00467Q9BRT7 94 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 PAXXQ9BUH6 204 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 SCNM1Q9BWG6 230 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 OTORQ9NRC9 128 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 PLXNB1O43157 2135 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 IGHV1-45A0A0A0MS14 117 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 hDV102S1A0JD36 115 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 A8MZ25 164 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 NPIPB6E9PJ23 425 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 RRHO14718 337 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 EDDM3AQ14507 147 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 OR1L8Q8NGR8 309 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 OSR1Q8TAX0 266 aaPredicted RBP2.23□□□□□ -2.05
NEDD4-204ENST00000503468 NRGNQ92686 78 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 HIST1H4GQ99525 98 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 HCFC1R1Q9NWW0 138 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 EPPK1P58107 5090 aaKnown RBP2.23□□□□□ -2.05
NEDD4-204ENST00000503468 TRAV26-2A0A0B4J265 109 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 IGKV1-12A0A0C4DH73 117 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 COX7A2P2O60397 106 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 IGKV1D-12P01611 117 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 IGHV3-13P01766 116 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 ZNF32P17041 273 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 FBLP22087 321 aaKnown RBP2.23□□□□□ -2.05
NEDD4-204ENST00000503468 NMUP48645 174 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 CACNG7P62955 275 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 RNF183Q96D59 192 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 FAM19A4Q96LR4 140 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 FZR1Q9UM11 496 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 EPDR1Q9UM22 224 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 PROCRQ9UNN8 238 aa2.23□□□□□ -2.05
NEDD4-204ENST00000503468 A0A0G2JRQ6 117 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 IGKV1-39P01597 117 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 IGKV1D-39P04432 117 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 FCER1GP30273 86 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 CFHR3Q02985 330 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 WFDC2Q14508 124 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 LCE2DQ5TA82 110 aaPredicted RBP2.22□□□□□ -2.05
NEDD4-204ENST00000503468 CFAP126Q5VTH2 177 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 ZNF493Q6ZR52 646 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 MOGAT3Q86VF5 341 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 MLST8Q9BVC4 326 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 LAMTOR3Q9UHA4 124 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 FAM215AQ9Y5M1 114 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 ALMS1Q8TCU4 4167 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 MGST3O14880 152 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 HOXA3O43365 443 aaPredicted RBP2.22□□□□□ -2.05
NEDD4-204ENST00000503468 NDUFS7O75251 213 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 WISP1O95388 367 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 ORM1P02763 201 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 INAFM2P0DMQ5 153 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 FGF6P10767 208 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 HLA-DMBP28068 263 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 PDE6HQ13956 83 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 C12orf74Q32Q52 190 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 Q6ZVH6 145 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 FAM19A3Q7Z5A8 133 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 TRGV9Q99603 122 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 PRRG4Q9BZD6 226 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 CDH23Q9H251 3354 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 IGHV4-4A0A075B6R2 117 aa2.22□□□□□ -2.05
NEDD4-204ENST00000503468 TRAV5A0A0B4J249 113 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms