RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 VWC2LB2RUY7 222 aa9.07□□□□□ -0.96
USP46-204ENST00000503060 NDUFB8O95169 186 aa9.07□□□□□ -0.96
USP46-204ENST00000503060 HLA-DRB1P01911 266 aa9.07□□□□□ -0.96
USP46-204ENST00000503060 EGR2P11161 476 aaPredicted RBP9.07□□□□□ -0.96
USP46-204ENST00000503060 AMTP48728 403 aa9.07□□□□□ -0.96
USP46-204ENST00000503060 PIP4P2Q8N4L2 257 aa9.07□□□□□ -0.96
USP46-204ENST00000503060 LINC00479Q96M42 142 aa9.07□□□□□ -0.96
USP46-204ENST00000503060 OSTCQ9NRP0 149 aa9.07□□□□□ -0.96
USP46-204ENST00000503060 V9GYV3 84 aa9.07□□□□□ -0.96
USP46-204ENST00000503060 TACC2O95359 2948 aa9.07□□□□□ -0.96
USP46-204ENST00000503060 B5MCH6 92 aa9.06□□□□□ -0.96
USP46-204ENST00000503060 TMEM97Q5BJF2 176 aa9.06□□□□□ -0.96
USP46-204ENST00000503060 TMEM14CQ9P0S9 112 aa9.06□□□□□ -0.96
USP46-204ENST00000503060 S4R3C0 116 aa9.06□□□□□ -0.96
USP46-204ENST00000503060 ABCA1O95477 2261 aa9.06□□□□□ -0.96
USP46-204ENST00000503060 TRAV9-1A0A075B6T8 112 aa9.06□□□□□ -0.96
USP46-204ENST00000503060 PGPA6NDG6 321 aa9.06□□□□□ -0.96
USP46-204ENST00000503060 PRB1P04280 392 aa9.06□□□□□ -0.96
USP46-204ENST00000503060 SLC25A5P05141 298 aaKnown RBP9.06□□□□□ -0.96
USP46-204ENST00000503060 RPL15P61313 204 aaKnown RBP9.06□□□□□ -0.96
USP46-204ENST00000503060 GNG5P63218 68 aa9.06□□□□□ -0.96
USP46-204ENST00000503060 MAP1LC3AQ9H492 121 aa9.06□□□□□ -0.96
USP46-204ENST00000503060 EPDR1Q9UM22 224 aa9.06□□□□□ -0.96
USP46-204ENST00000503060 DOPEY1Q5JWR5 2465 aa9.05□□□□□ -0.96
USP46-204ENST00000503060 SMIM17P0DL12 118 aa9.05□□□□□ -0.96
USP46-204ENST00000503060 MGST1P10620 155 aaKnown RBP9.05□□□□□ -0.96
USP46-204ENST00000503060 FHL3Q13643 280 aa9.05□□□□□ -0.96
USP46-204ENST00000503060 LINC01559Q495D7 138 aa9.05□□□□□ -0.96
USP46-204ENST00000503060 OR10J3Q5JRS4 329 aa9.05□□□□□ -0.96
USP46-204ENST00000503060 FAM162BQ5T6X4 162 aa9.05□□□□□ -0.96
USP46-204ENST00000503060 GFI1BQ5VTD9 330 aa9.05□□□□□ -0.96
USP46-204ENST00000503060 TOMM20LQ6UXN7 152 aa9.05□□□□□ -0.96
USP46-204ENST00000503060 HIST3H2BBQ8N257 126 aa9.05□□□□□ -0.96
USP46-204ENST00000503060 ZNF491Q8N8L2 437 aa9.05□□□□□ -0.96
USP46-204ENST00000503060 HSPB9Q9BQS6 159 aa9.05□□□□□ -0.96
USP46-204ENST00000503060 SHANK2-AS3Q9BTD1 123 aa9.05□□□□□ -0.96
USP46-204ENST00000503060 RNASE7Q9H1E1 156 aaKnown RBP9.05□□□□□ -0.96
USP46-204ENST00000503060 H3BTX0 84 aa9.05□□□□□ -0.96
USP46-204ENST00000503060 ISLRO14498 428 aa9.05□□□□□ -0.96
USP46-204ENST00000503060 GZMBP10144 247 aa9.05□□□□□ -0.96
USP46-204ENST00000503060 YPEL3P61236 119 aaPredicted RBP9.05□□□□□ -0.96
USP46-204ENST00000503060 C21orf62Q9NYP8 219 aa9.05□□□□□ -0.96
USP46-204ENST00000503060 THYN1Q9P016 225 aa9.05□□□□□ -0.96
USP46-204ENST00000503060 WI2-2373I1.2A0A1W2PRP0 233 aa9.04□□□□□ -0.96
USP46-204ENST00000503060 F8W735 103 aaPredicted RBP9.04□□□□□ -0.96
USP46-204ENST00000503060 H3BRN7 92 aa9.04□□□□□ -0.96
USP46-204ENST00000503060 AMY1AP04745 511 aa9.04□□□□□ -0.96
USP46-204ENST00000503060 IL4P05112 153 aa9.04□□□□□ -0.96
USP46-204ENST00000503060 PAFAH1B2P68402 229 aa9.04□□□□□ -0.96
USP46-204ENST00000503060 TMEM183BQ1AE95 376 aa9.04□□□□□ -0.96
USP46-204ENST00000503060 Q56UQ5 140 aa9.04□□□□□ -0.96
USP46-204ENST00000503060 BAGE2Q86Y30 109 aa9.04□□□□□ -0.96
USP46-204ENST00000503060 BBC3Q96PG8 261 aaPredicted RBP9.04□□□□□ -0.96
USP46-204ENST00000503060 NDFIP1Q9BT67 221 aa9.04□□□□□ -0.96
USP46-204ENST00000503060 GTSF1LQ9H1H1 148 aa9.04□□□□□ -0.96
USP46-204ENST00000503060 Q9H3A6 140 aa9.04□□□□□ -0.96
USP46-204ENST00000503060 SPTAN1Q13813 2472 aaKnown RBP9.04□□□□□ -0.96
USP46-204ENST00000503060 IGHV4-30-2A0A087WSY4 118 aa9.04□□□□□ -0.96
USP46-204ENST00000503060 IGHV1-69DA0A0B4J2H0 117 aa9.04□□□□□ -0.96
USP46-204ENST00000503060 IGHV1-69P01742 117 aa9.04□□□□□ -0.96
USP46-204ENST00000503060 CD33P20138 364 aa9.04□□□□□ -0.96
USP46-204ENST00000503060 C5orf17Q8NAS9 161 aa9.04□□□□□ -0.96
USP46-204ENST00000503060 ZNF586Q9NXT0 402 aa9.04□□□□□ -0.96
USP46-204ENST00000503060 TRAPPC1Q9Y5R8 145 aa9.04□□□□□ -0.96
USP46-204ENST00000503060 CACNA1BQ00975 2339 aa9.04□□□□□ -0.96
USP46-204ENST00000503060 IGHV3OR16-10A0A075B7F0 116 aa9.03□□□□□ -0.96
USP46-204ENST00000503060 UBE2G1P62253 170 aa9.03□□□□□ -0.96
USP46-204ENST00000503060 IBA57Q5T440 356 aaKnown RBP9.03□□□□□ -0.96
USP46-204ENST00000503060 ZNF705AQ6ZN79 300 aaPredicted RBP9.03□□□□□ -0.96
USP46-204ENST00000503060 KLF12Q9Y4X4 402 aa9.03□□□□□ -0.96
USP46-204ENST00000503060 ABCA2Q9BZC7 2435 aa9.03□□□□□ -0.96
USP46-204ENST00000503060 TFPI2P48307 235 aa9.03□□□□□ -0.96
USP46-204ENST00000503060 UNQ5815/PRO19632Q6UWF5 114 aa9.03□□□□□ -0.96
USP46-204ENST00000503060 OTORQ9NRC9 128 aa9.03□□□□□ -0.96
USP46-204ENST00000503060 ATP6V0E1O15342 81 aa9.02□□□□□ -0.97
USP46-204ENST00000503060 IGHV3-23P01764 117 aa9.02□□□□□ -0.97
USP46-204ENST00000503060 ECSCRQ19T08 205 aa9.02□□□□□ -0.97
USP46-204ENST00000503060 COA6Q5JTJ3 125 aaKnown RBP9.02□□□□□ -0.97
USP46-204ENST00000503060 BPIFA4PQ86YQ2 179 aa9.02□□□□□ -0.97
USP46-204ENST00000503060 ZNF418Q8TF45 676 aaPredicted RBP9.02□□□□□ -0.97
USP46-204ENST00000503060 RNF183Q96D59 192 aa9.02□□□□□ -0.97
USP46-204ENST00000503060 LAMTOR2Q9Y2Q5 125 aa9.02□□□□□ -0.97
USP46-204ENST00000503060 USP24Q9UPU5 2620 aa9.02□□□□□ -0.97
USP46-204ENST00000503060 TRAV40A0A0B4J280 105 aa9.02□□□□□ -0.97
USP46-204ENST00000503060 TCRAP04437 139 aa9.02□□□□□ -0.97
USP46-204ENST00000503060 TAL2Q16559 108 aa9.02□□□□□ -0.97
USP46-204ENST00000503060 KLK9Q2XQG4 91 aa9.02□□□□□ -0.97
USP46-204ENST00000503060 FAM231DQ6ZW35 169 aa9.02□□□□□ -0.97
USP46-204ENST00000503060 TMEM183AQ8IXX5 376 aa9.02□□□□□ -0.97
USP46-204ENST00000503060 KLK9Q9UKQ9 250 aa9.02□□□□□ -0.97
USP46-204ENST00000503060 C5orf56Q8N8D9 126 aa9.01□□□□□ -0.97
USP46-204ENST00000503060 OR4F17Q8NGA8 305 aa9.01□□□□□ -0.97
USP46-204ENST00000503060 VN1R17PQ8TDU5 208 aa9.01□□□□□ -0.97
USP46-204ENST00000503060 FMC1Q96HJ9 113 aa9.01□□□□□ -0.97
USP46-204ENST00000503060 MIEN1Q9BRT3 115 aa9.01□□□□□ -0.97
USP46-204ENST00000503060 TMEM126AQ9H061 195 aa9.01□□□□□ -0.97
USP46-204ENST00000503060 SERTAD4Q9NUC0 356 aa9.01□□□□□ -0.97
USP46-204ENST00000503060 USP9XQ93008 2570 aaPredicted RBP9.01□□□□□ -0.97
USP46-204ENST00000503060 TMEM189A5PLL7 270 aa9.01□□□□□ -0.97
USP46-204ENST00000503060 OR2T8A6NH00 312 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms