RNA–Protein interactions for RNA: ENST00000498804.1

TRBVA-201, Transcript of T cell receptor beta variable A (pseudogene), humanhuman

BASIC

Gene TRBVA, Length 316 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVA-201ENST00000498804 KIAA1551Q9HCM1 1747 aa0.49□□□□□ -2.33
TRBVA-201ENST00000498804 EIF4G3O43432 1585 aaKnown RBP0.49□□□□□ -2.33
TRBVA-201ENST00000498804 SLIT2O94813 1529 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 CUL9Q8IWT3 2517 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 ZFC3H1O60293 1989 aaKnown RBP0.48□□□□□ -2.33
TRBVA-201ENST00000498804 MED14O60244 1454 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 CASKIN1Q8WXD9 1431 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 PLXNA2O75051 1894 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 DOCK1Q14185 1865 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 RTL9Q8NET4 1388 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 NOTCH1P46531 2555 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 TRAV38-1A0A0B4J264 116 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 IGHV1-58A0A0C4DH39 117 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 GRIFINA4D1Z8 144 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 OR51F1A6NGY5 319 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 F6UZH7 168 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 K7ERU9 68 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 AIPO00170 330 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 CORTO00230 105 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 SLC22A1O15245 554 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 GNRH2O43555 120 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 GADD45GO95257 159 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 NDUFC2O95298 119 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 IFNA7P01567 189 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 PAEPP09466 180 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 TRGC1P0CF51 173 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 LYNX1P0DP58 116 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 HIST1H1DP16402 221 aaKnown RBP0.48□□□□□ -2.33
TRBVA-201ENST00000498804 S100PP25815 95 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 XCL1P47992 114 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 RBP2P50120 134 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 NDUFA6P56556 154 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 TAS2R45P59539 299 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 NCS1P62166 190 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 UBE2BP63146 152 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 CAV1Q03135 178 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 CATR1Q13166 79 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 INSL4Q14641 139 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 ZNF791Q3KP31 576 aaPredicted RBP0.48□□□□□ -2.33
TRBVA-201ENST00000498804 CLLU1Q5K131 121 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 LYRM7Q5U5X0 104 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 LCN15Q6UWW0 184 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 Q6ZRN7 208 aaPredicted RBP0.48□□□□□ -2.33
TRBVA-201ENST00000498804 AAED1Q7RTV5 226 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 LINC00305Q7Z4B0 112 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 SLC35E3Q7Z769 313 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 DEFB128Q7Z7B8 93 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 CTAGE3PQ8IX95 158 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 TCTE3Q8IZS6 198 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 C9orf62Q8N4C0 152 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 NUP35Q8NFH5 326 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 CCL4L1Q8NHW4 92 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 C10orf105Q8TEF2 133 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 SKA2Q8WVK7 121 aaPredicted RBP0.48□□□□□ -2.33
TRBVA-201ENST00000498804 CLEC2BQ92478 149 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 PSMF1Q92530 271 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 ARL11Q969Q4 196 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 TMEM106AQ96A25 262 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 MAGOHBQ96A72 148 aaKnown RBP0.48□□□□□ -2.33
TRBVA-201ENST00000498804 MS4A6EQ96DS6 147 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 MRPS24Q96EL2 167 aaKnown RBP0.48□□□□□ -2.33
TRBVA-201ENST00000498804 DPH3Q96FX2 82 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 NABP2Q9BQ15 211 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 SLC50A1Q9BRV3 221 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 ZNF471Q9BX82 626 aaPredicted RBP0.48□□□□□ -2.33
TRBVA-201ENST00000498804 EIF5A2Q9GZV4 153 aaKnown RBP0.48□□□□□ -2.33
TRBVA-201ENST00000498804 PBOV1Q9GZY1 135 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 FAM96AQ9H5X1 160 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 RNF122Q9H9V4 155 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 CALML5Q9NZT1 146 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 LINC00474Q9P2X8 69 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 AK3Q9UIJ7 227 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 BOKQ9UMX3 212 aaPredicted RBP0.48□□□□□ -2.33
TRBVA-201ENST00000498804 FIS1Q9Y3D6 152 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 COL4A6Q14031 1691 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 TOPAZ1Q8N9V7 1692 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 SMARCA4P51532 1647 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 ZNF638Q14966 1978 aaKnown RBP0.48□□□□□ -2.33
TRBVA-201ENST00000498804 ARHGEF5Q12774 1597 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 ANK1P16157 1881 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 KIAA1549LQ6ZVL6 1849 aa0.48□□□□□ -2.33
TRBVA-201ENST00000498804 ZNF609O15014 1411 aa0.47□□□□□ -2.33
TRBVA-201ENST00000498804 VPS8Q8N3P4 1428 aa0.47□□□□□ -2.33
TRBVA-201ENST00000498804 KIAA1107Q9UPP5 1409 aa0.47□□□□□ -2.33
TRBVA-201ENST00000498804 LAMB4A4D0S4 1761 aa0.47□□□□□ -2.33
TRBVA-201ENST00000498804 ARAP2Q8WZ64 1704 aa0.47□□□□□ -2.33
TRBVA-201ENST00000498804 FANCMQ8IYD8 2048 aa0.47□□□□□ -2.33
TRBVA-201ENST00000498804 SCN7AQ01118 1682 aa0.47□□□□□ -2.33
TRBVA-201ENST00000498804 TANC2Q9HCD6 1990 aa0.47□□□□□ -2.33
TRBVA-201ENST00000498804 IGHV3-73A0A0B4J1V6 119 aa0.47□□□□□ -2.33
TRBVA-201ENST00000498804 TRAV13-1A0A0B4J241 112 aa0.47□□□□□ -2.33
TRBVA-201ENST00000498804 TRAV5A0A0B4J249 113 aa0.47□□□□□ -2.33
TRBVA-201ENST00000498804 A0A0G2JQZ4 141 aa0.47□□□□□ -2.33
TRBVA-201ENST00000498804 TRBV27A0A0K0K1C4 114 aa0.47□□□□□ -2.33
TRBVA-201ENST00000498804 A0A1W2PQD3 144 aa0.47□□□□□ -2.33
TRBVA-201ENST00000498804 FAM92AA1XBS5 289 aa0.47□□□□□ -2.33
TRBVA-201ENST00000498804 C7orf71A4D174 169 aa0.47□□□□□ -2.33
TRBVA-201ENST00000498804 ARL5CA6NH57 179 aa0.47□□□□□ -2.33
TRBVA-201ENST00000498804 C10orf142B7Z368 130 aa0.47□□□□□ -2.33
TRBVA-201ENST00000498804 H3BMG7 143 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 191.7 ms