RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 RPP25LQ8N5L8 163 aaKnown RBP11.14□□□□□ -0.63
NUP50-219ENST00000497960 PHLDA1Q8WV24 401 aaPredicted RBP11.14□□□□□ -0.63
NUP50-219ENST00000497960 BLNKQ8WV28 456 aa11.14□□□□□ -0.63
NUP50-219ENST00000497960 TMED6Q8WW62 240 aa11.14□□□□□ -0.63
NUP50-219ENST00000497960 C17orf77Q96MU5 243 aa11.14□□□□□ -0.63
NUP50-219ENST00000497960 HRH4Q9H3N8 390 aa11.14□□□□□ -0.63
NUP50-219ENST00000497960 SAV1Q9H4B6 383 aaPredicted RBP11.14□□□□□ -0.63
NUP50-219ENST00000497960 RPRMQ9NS64 109 aa11.14□□□□□ -0.63
NUP50-219ENST00000497960 XCL2Q9UBD3 114 aa11.14□□□□□ -0.63
NUP50-219ENST00000497960 IGHV4-28A0A0C4DH34 117 aa11.13□□□□□ -0.63
NUP50-219ENST00000497960 ZNF705EA8MWA4 302 aaPredicted RBP11.13□□□□□ -0.63
NUP50-219ENST00000497960 H3BQ15 152 aa11.13□□□□□ -0.63
NUP50-219ENST00000497960 BOLA2-SMG1P6H3BVE0 249 aa11.13□□□□□ -0.63
NUP50-219ENST00000497960 SLC17A3O00476 420 aa11.13□□□□□ -0.63
NUP50-219ENST00000497960 HIST1H1EP10412 219 aaKnown RBP11.13□□□□□ -0.63
NUP50-219ENST00000497960 NANOS2P60321 138 aaKnown RBP11.13□□□□□ -0.63
NUP50-219ENST00000497960 EIF5AL1Q6IS14 154 aaKnown RBP11.13□□□□□ -0.63
NUP50-219ENST00000497960 EBLN2Q6P2I7 272 aa11.13□□□□□ -0.63
NUP50-219ENST00000497960 PQLC2Q6ZP29 291 aa11.13□□□□□ -0.63
NUP50-219ENST00000497960 Q8NAQ8 132 aa11.13□□□□□ -0.63
NUP50-219ENST00000497960 CSNK1G2-AS1Q8NCQ2 148 aa11.13□□□□□ -0.63
NUP50-219ENST00000497960 ZNF586Q9NXT0 402 aa11.13□□□□□ -0.63
NUP50-219ENST00000497960 TRBV19A0A075B6N1 114 aa11.12□□□□□ -0.63
NUP50-219ENST00000497960 CTXND1A0A1B0GTU2 59 aa11.12□□□□□ -0.63
NUP50-219ENST00000497960 IGKV3-20P01619 116 aa11.12□□□□□ -0.63
NUP50-219ENST00000497960 ARL14EPLP0DKL9 152 aa11.12□□□□□ -0.63
NUP50-219ENST00000497960 DEFB1P60022 68 aa11.12□□□□□ -0.63
NUP50-219ENST00000497960 GDF5OSQ5U4N7 250 aa11.12□□□□□ -0.63
NUP50-219ENST00000497960 IGFL4Q6B9Z1 124 aa11.12□□□□□ -0.63
NUP50-219ENST00000497960 IQCF2Q8IXL9 164 aa11.12□□□□□ -0.63
NUP50-219ENST00000497960 RNF182Q8N6D2 247 aa11.12□□□□□ -0.63
NUP50-219ENST00000497960 ZNF738Q8NE65 137 aa11.12□□□□□ -0.63
NUP50-219ENST00000497960 OR4B1Q8NGF8 309 aa11.12□□□□□ -0.63
NUP50-219ENST00000497960 RNF141Q8WVD5 230 aa11.12□□□□□ -0.63
NUP50-219ENST00000497960 RAB24Q969Q5 203 aa11.12□□□□□ -0.63
NUP50-219ENST00000497960 ZNF331Q9NQX6 463 aaPredicted RBP11.12□□□□□ -0.63
NUP50-219ENST00000497960 TRAV8-2A0A0B4J237 113 aa11.11□□□□□ -0.63
NUP50-219ENST00000497960 UMAD1C9J7I0 102 aa11.11□□□□□ -0.63
NUP50-219ENST00000497960 ZNF253O75346 499 aa11.11□□□□□ -0.63
NUP50-219ENST00000497960 NBEAP1P0C6P0 100 aa11.11□□□□□ -0.63
NUP50-219ENST00000497960 STAG3L2P0CL84 134 aa11.11□□□□□ -0.63
NUP50-219ENST00000497960 STAG3L3P0CL85 134 aa11.11□□□□□ -0.63
NUP50-219ENST00000497960 PDE6HQ13956 83 aa11.11□□□□□ -0.63
NUP50-219ENST00000497960 SSX7Q7RTT5 188 aa11.11□□□□□ -0.63
NUP50-219ENST00000497960 FAM213BQ8TBF2 198 aa11.11□□□□□ -0.63
NUP50-219ENST00000497960 FXYD5Q96DB9 178 aa11.11□□□□□ -0.63
NUP50-219ENST00000497960 ZNF503Q96F45 646 aa11.11□□□□□ -0.63
NUP50-219ENST00000497960 PHYHIPLQ96FC7 376 aa11.11□□□□□ -0.63
NUP50-219ENST00000497960 C20orf173Q96LM9 149 aa11.11□□□□□ -0.63
NUP50-219ENST00000497960 CLUHP3Q96NS8 147 aa11.11□□□□□ -0.63
NUP50-219ENST00000497960 X6R8D5 127 aa11.11□□□□□ -0.63
NUP50-219ENST00000497960 SACSQ9NZJ4 4579 aa11.11□□□□□ -0.63
NUP50-219ENST00000497960 RYR2Q92736 4967 aa11.11□□□□□ -0.63
NUP50-219ENST00000497960 MAP1LC3B2A6NCE7 125 aa11.1□□□□□ -0.63
NUP50-219ENST00000497960 CXorf1O96002 111 aa11.1□□□□□ -0.63
NUP50-219ENST00000497960 RBMY1A1P0DJD3 496 aaKnown RBP11.1□□□□□ -0.63
NUP50-219ENST00000497960 RBMY1CP0DJD4 496 aa11.1□□□□□ -0.63
NUP50-219ENST00000497960 HLA-DMBP28068 263 aa11.1□□□□□ -0.63
NUP50-219ENST00000497960 PSG9Q00887 426 aa11.1□□□□□ -0.63
NUP50-219ENST00000497960 RBMY1FQ15415 496 aaKnown RBP11.1□□□□□ -0.63
NUP50-219ENST00000497960 ZNF726P1Q15940 193 aa11.1□□□□□ -0.63
NUP50-219ENST00000497960 LINC00476Q8WZB0 136 aa11.1□□□□□ -0.63
NUP50-219ENST00000497960 MAP1LC3BQ9GZQ8 125 aa11.1□□□□□ -0.63
NUP50-219ENST00000497960 AAMDCQ9H7C9 122 aa11.1□□□□□ -0.63
NUP50-219ENST00000497960 BOLA1Q9Y3E2 137 aa11.1□□□□□ -0.63
NUP50-219ENST00000497960 A0A0J9YX75 114 aa11.09□□□□□ -0.63
NUP50-219ENST00000497960 F6UB75 175 aa11.09□□□□□ -0.63
NUP50-219ENST00000497960 LY6G6CO95867 125 aa11.09□□□□□ -0.63
NUP50-219ENST00000497960 FXYD7P58549 80 aa11.09□□□□□ -0.63
NUP50-219ENST00000497960 PSG3Q16557 428 aa11.09□□□□□ -0.63
NUP50-219ENST00000497960 DPPA3Q6W0C5 159 aa11.09□□□□□ -0.63
NUP50-219ENST00000497960 SAT2Q96F10 170 aaPredicted RBP11.09□□□□□ -0.63
NUP50-219ENST00000497960 NDUFB4O95168 129 aa11.08□□□□□ -0.64
NUP50-219ENST00000497960 GCHFRP30047 84 aa11.08□□□□□ -0.64
NUP50-219ENST00000497960 FHITP49789 147 aa11.08□□□□□ -0.64
NUP50-219ENST00000497960 FGF8P55075 233 aaPredicted RBP11.08□□□□□ -0.64
NUP50-219ENST00000497960 C11orf94C9JXX5 98 aa11.07□□□□□ -0.64
NUP50-219ENST00000497960 SULT1A2P50226 295 aa11.07□□□□□ -0.64
NUP50-219ENST00000497960 RAB5CP51148 216 aa11.07□□□□□ -0.64
NUP50-219ENST00000497960 FAM74A1Q5RGS3 127 aa11.07□□□□□ -0.64
NUP50-219ENST00000497960 EXOC3-AS1Q8N2X6 119 aa11.07□□□□□ -0.64
NUP50-219ENST00000497960 C2CD4CQ8TF44 421 aa11.07□□□□□ -0.64
NUP50-219ENST00000497960 RPUSD4Q96CM3 377 aaKnown RBP11.07□□□□□ -0.64
NUP50-219ENST00000497960 Q9H3A6 140 aa11.07□□□□□ -0.64
NUP50-219ENST00000497960 TMEM167BQ9NRX6 74 aa11.07□□□□□ -0.64
NUP50-219ENST00000497960 PLA2G2EQ9NZK7 142 aa11.07□□□□□ -0.64
NUP50-219ENST00000497960 PRELID1Q9Y255 219 aa11.07□□□□□ -0.64
NUP50-219ENST00000497960 IGHV3OR16-12A0A075B7B8 117 aa11.06□□□□□ -0.64
NUP50-219ENST00000497960 SMIM9A6NGZ8 99 aa11.06□□□□□ -0.64
NUP50-219ENST00000497960 DUSP14O95147 198 aaKnown RBP11.06□□□□□ -0.64
NUP50-219ENST00000497960 PRB4P10163 310 aaPredicted RBP11.06□□□□□ -0.64
NUP50-219ENST00000497960 HIST1H1AQ02539 215 aaPredicted RBP11.06□□□□□ -0.64
NUP50-219ENST00000497960 ICAM4Q14773 271 aa11.06□□□□□ -0.64
NUP50-219ENST00000497960 ALKAL2Q6UX46 152 aa11.06□□□□□ -0.64
NUP50-219ENST00000497960 ZNF705AQ6ZN79 300 aaPredicted RBP11.06□□□□□ -0.64
NUP50-219ENST00000497960 MRPL53Q96EL3 112 aaKnown RBP11.06□□□□□ -0.64
NUP50-219ENST00000497960 NEU1Q99519 415 aa11.06□□□□□ -0.64
NUP50-219ENST00000497960 SLC35B3Q9H1N7 401 aa11.06□□□□□ -0.64
NUP50-219ENST00000497960 GOLT1BQ9Y3E0 138 aa11.06□□□□□ -0.64
NUP50-219ENST00000497960 A0A1B0GV50 99 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms