RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 IL17DQ8TAD2 202 aa8.16□□□□□ -1.1
ERCC8-208ENST00000497892 RPUSD4Q96CM3 377 aaKnown RBP8.16□□□□□ -1.1
ERCC8-208ENST00000497892 MFFQ9GZY8 342 aa8.16□□□□□ -1.1
ERCC8-208ENST00000497892 SLC35B3Q9H1N7 401 aa8.16□□□□□ -1.1
ERCC8-208ENST00000497892 RFNGQ9Y644 331 aa8.16□□□□□ -1.1
ERCC8-208ENST00000497892 ARPC5O15511 151 aa8.15□□□□□ -1.1
ERCC8-208ENST00000497892 NDUFB4O95168 129 aa8.15□□□□□ -1.1
ERCC8-208ENST00000497892 ZNF705DP0CH99 300 aaPredicted RBP8.15□□□□□ -1.1
ERCC8-208ENST00000497892 ZNF705BP0CI00 300 aaPredicted RBP8.15□□□□□ -1.1
ERCC8-208ENST00000497892 FXYD7P58549 80 aa8.15□□□□□ -1.1
ERCC8-208ENST00000497892 RHOBP62745 196 aa8.15□□□□□ -1.1
ERCC8-208ENST00000497892 HIST1H1AQ02539 215 aaPredicted RBP8.15□□□□□ -1.1
ERCC8-208ENST00000497892 CASC10Q5T4H9 136 aa8.15□□□□□ -1.1
ERCC8-208ENST00000497892 ZNF705AQ6ZN79 300 aaPredicted RBP8.15□□□□□ -1.1
ERCC8-208ENST00000497892 HSD17B11Q8NBQ5 300 aa8.15□□□□□ -1.1
ERCC8-208ENST00000497892 FXYD5Q96DB9 178 aa8.15□□□□□ -1.1
ERCC8-208ENST00000497892 PSMG3Q9BT73 122 aaPredicted RBP8.15□□□□□ -1.1
ERCC8-208ENST00000497892 X6R8D5 127 aa8.15□□□□□ -1.1
ERCC8-208ENST00000497892 STARD9Q9P2P6 4700 aa8.14□□□□□ -1.11
ERCC8-208ENST00000497892 ZNF705FA8MVS1 300 aaPredicted RBP8.14□□□□□ -1.11
ERCC8-208ENST00000497892 SMLR1H3BR10 107 aa8.14□□□□□ -1.11
ERCC8-208ENST00000497892 OR7C2O60412 319 aa8.14□□□□□ -1.11
ERCC8-208ENST00000497892 MIFP14174 115 aa8.14□□□□□ -1.11
ERCC8-208ENST00000497892 M6PRP20645 277 aa8.14□□□□□ -1.11
ERCC8-208ENST00000497892 ATP6V0CP27449 155 aa8.14□□□□□ -1.11
ERCC8-208ENST00000497892 RAB2AP61019 212 aa8.14□□□□□ -1.11
ERCC8-208ENST00000497892 ACOT6Q3I5F7 207 aaPredicted RBP8.14□□□□□ -1.11
ERCC8-208ENST00000497892 KHDC3LQ587J8 217 aa8.14□□□□□ -1.11
ERCC8-208ENST00000497892 MRPL53Q96EL3 112 aaKnown RBP8.14□□□□□ -1.11
ERCC8-208ENST00000497892 ZNF503Q96F45 646 aa8.14□□□□□ -1.11
ERCC8-208ENST00000497892 PAXXQ9BUH6 204 aa8.14□□□□□ -1.11
ERCC8-208ENST00000497892 OR51M1Q9H341 326 aa8.14□□□□□ -1.11
ERCC8-208ENST00000497892 TENM2Q9NT68 2774 aa8.14□□□□□ -1.11
ERCC8-208ENST00000497892 BORCS7-ASMTA0A0B4J1R7 106 aa8.13□□□□□ -1.11
ERCC8-208ENST00000497892 IGHV4-28A0A0C4DH34 117 aa8.13□□□□□ -1.11
ERCC8-208ENST00000497892 PRAC2D3DTV9 90 aa8.13□□□□□ -1.11
ERCC8-208ENST00000497892 BOLA2-SMG1P6H3BVE0 249 aa8.13□□□□□ -1.11
ERCC8-208ENST00000497892 AMBPP02760 352 aa8.13□□□□□ -1.11
ERCC8-208ENST00000497892 OR10J4P0C629 311 aa8.13□□□□□ -1.11
ERCC8-208ENST00000497892 NBEAP1P0C6P0 100 aa8.13□□□□□ -1.11
ERCC8-208ENST00000497892 PRB4P10163 310 aaPredicted RBP8.13□□□□□ -1.11
ERCC8-208ENST00000497892 TAS2R45P59539 299 aa8.13□□□□□ -1.11
ERCC8-208ENST00000497892 UBE2L3P68036 154 aaKnown RBP8.13□□□□□ -1.11
ERCC8-208ENST00000497892 SPINK13Q1W4C9 94 aa8.13□□□□□ -1.11
ERCC8-208ENST00000497892 LCE4AQ5TA78 99 aa8.13□□□□□ -1.11
ERCC8-208ENST00000497892 RPL7L1Q6DKI1 246 aaKnown RBP8.13□□□□□ -1.11
ERCC8-208ENST00000497892 ZFAND6Q6FIF0 208 aa8.13□□□□□ -1.11
ERCC8-208ENST00000497892 BLNKQ8WV28 456 aa8.13□□□□□ -1.11
ERCC8-208ENST00000497892 RNF141Q8WVD5 230 aa8.13□□□□□ -1.11
ERCC8-208ENST00000497892 IGF2BP2-AS1Q96M15 143 aa8.13□□□□□ -1.11
ERCC8-208ENST00000497892 SH3BGRL3Q9H299 93 aa8.13□□□□□ -1.11
ERCC8-208ENST00000497892 PRELID1Q9Y255 219 aa8.13□□□□□ -1.11
ERCC8-208ENST00000497892 KMT2CQ8NEZ4 4911 aaKnown RBP8.13□□□□□ -1.11
ERCC8-208ENST00000497892 M0R2Z0 102 aa8.12□□□□□ -1.11
ERCC8-208ENST00000497892 M0R3E3 92 aa8.12□□□□□ -1.11
ERCC8-208ENST00000497892 TAAR5O14804 337 aa8.12□□□□□ -1.11
ERCC8-208ENST00000497892 DEFB4AO15263 64 aa8.12□□□□□ -1.11
ERCC8-208ENST00000497892 CRXO43186 299 aaPredicted RBP8.12□□□□□ -1.11
ERCC8-208ENST00000497892 INSP01308 110 aa8.12□□□□□ -1.11
ERCC8-208ENST00000497892 RBMY1A1P0DJD3 496 aaKnown RBP8.12□□□□□ -1.11
ERCC8-208ENST00000497892 RBMY1CP0DJD4 496 aa8.12□□□□□ -1.11
ERCC8-208ENST00000497892 SERF2P84101 59 aa8.12□□□□□ -1.11
ERCC8-208ENST00000497892 ZNF345Q14585 488 aa8.12□□□□□ -1.11
ERCC8-208ENST00000497892 RBMY1FQ15415 496 aaKnown RBP8.12□□□□□ -1.11
ERCC8-208ENST00000497892 Q6ZNX1 250 aa8.12□□□□□ -1.11
ERCC8-208ENST00000497892 EXOC3-AS1Q8N2X6 119 aa8.12□□□□□ -1.11
ERCC8-208ENST00000497892 OR10G4Q8NGN3 311 aa8.12□□□□□ -1.11
ERCC8-208ENST00000497892 OR10G9Q8NGN4 311 aa8.12□□□□□ -1.11
ERCC8-208ENST00000497892 OR10G7Q8NGN6 311 aa8.12□□□□□ -1.11
ERCC8-208ENST00000497892 OR10J6PQ8NGY7 276 aa8.12□□□□□ -1.11
ERCC8-208ENST00000497892 GNPNAT1Q96EK6 184 aaPredicted RBP8.12□□□□□ -1.11
ERCC8-208ENST00000497892 PHYHIPLQ96FC7 376 aa8.12□□□□□ -1.11
ERCC8-208ENST00000497892 NEU1Q99519 415 aa8.12□□□□□ -1.11
ERCC8-208ENST00000497892 AAMDCQ9H7C9 122 aa8.12□□□□□ -1.11
ERCC8-208ENST00000497892 A0A1W2PPV4 95 aa8.11□□□□□ -1.11
ERCC8-208ENST00000497892 HMSDA8MTL9 139 aa8.11□□□□□ -1.11
ERCC8-208ENST00000497892 NPIPB6E9PJ23 425 aa8.11□□□□□ -1.11
ERCC8-208ENST00000497892 EIF3GO75821 320 aaKnown RBP eCLIP8.11□□□□□ -1.11
ERCC8-208ENST00000497892 JTBO76095 146 aa8.11□□□□□ -1.11
ERCC8-208ENST00000497892 ICAM4Q14773 271 aa8.11□□□□□ -1.11
ERCC8-208ENST00000497892 FAM122CQ6P4D5 195 aa8.11□□□□□ -1.11
ERCC8-208ENST00000497892 PQLC2Q6ZP29 291 aa8.11□□□□□ -1.11
ERCC8-208ENST00000497892 BAP18Q8IXM2 172 aa8.11□□□□□ -1.11
ERCC8-208ENST00000497892 C1orf158Q8N1D5 194 aa8.11□□□□□ -1.11
ERCC8-208ENST00000497892 RPP25LQ8N5L8 163 aaKnown RBP8.11□□□□□ -1.11
ERCC8-208ENST00000497892 OR11H4Q8NGC9 324 aa8.11□□□□□ -1.11
ERCC8-208ENST00000497892 GOLT1BQ9Y3E0 138 aa8.11□□□□□ -1.11
ERCC8-208ENST00000497892 IGHV3OR16-12A0A075B7B8 117 aa8.1□□□□□ -1.11
ERCC8-208ENST00000497892 SMIM9A6NGZ8 99 aa8.1□□□□□ -1.11
ERCC8-208ENST00000497892 MBP02144 154 aa8.1□□□□□ -1.11
ERCC8-208ENST00000497892 CDKN1BP46527 198 aa8.1□□□□□ -1.11
ERCC8-208ENST00000497892 CDC34P49427 236 aaPredicted RBP8.1□□□□□ -1.11
ERCC8-208ENST00000497892 LYPD1Q8N2G4 141 aa8.1□□□□□ -1.11
ERCC8-208ENST00000497892 KCNRGQ8N5I3 272 aa8.1□□□□□ -1.11
ERCC8-208ENST00000497892 C11orf45Q8TAV5 145 aa8.1□□□□□ -1.11
ERCC8-208ENST00000497892 ODF3Q96PU9 254 aa8.1□□□□□ -1.11
ERCC8-208ENST00000497892 CYTL1Q9NRR1 136 aa8.1□□□□□ -1.11
ERCC8-208ENST00000497892 PPP1R14DQ9NXH3 145 aa8.1□□□□□ -1.11
ERCC8-208ENST00000497892 TRAV12-2A0A075B6T6 113 aa8.09□□□□□ -1.11
ERCC8-208ENST00000497892 CXorf65A6NEN9 183 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms