RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 DEFB130AP0DP74 79 aa11.43□□□□□ -0.58
VIM-208ENST00000497849 YPEL3P61236 119 aaPredicted RBP11.43□□□□□ -0.58
VIM-208ENST00000497849 PSG9Q00887 426 aa11.43□□□□□ -0.58
VIM-208ENST00000497849 ZNF90Q03938 601 aa11.43□□□□□ -0.58
VIM-208ENST00000497849 AKR1C1Q04828 323 aa11.43□□□□□ -0.58
VIM-208ENST00000497849 TTC32Q5I0X7 151 aa11.43□□□□□ -0.58
VIM-208ENST00000497849 TMEM182Q6ZP80 229 aaPredicted RBP11.43□□□□□ -0.58
VIM-208ENST00000497849 OR5C1Q8NGR4 320 aa11.43□□□□□ -0.58
VIM-208ENST00000497849 LINC00052Q96N35 136 aa11.43□□□□□ -0.58
VIM-208ENST00000497849 ZNF471Q9BX82 626 aaPredicted RBP11.43□□□□□ -0.58
VIM-208ENST00000497849 MDFICQ9P1T7 246 aa11.43□□□□□ -0.58
VIM-208ENST00000497849 BORCS7-ASMTA0A0B4J1R7 106 aa11.42□□□□□ -0.58
VIM-208ENST00000497849 ZFP92A6NM28 416 aa11.42□□□□□ -0.58
VIM-208ENST00000497849 LYRM9A8MSI8 78 aa11.42□□□□□ -0.58
VIM-208ENST00000497849 F6UB75 175 aa11.42□□□□□ -0.58
VIM-208ENST00000497849 GATA2P23769 480 aaPredicted RBP11.42□□□□□ -0.58
VIM-208ENST00000497849 CLINT1Q14677 625 aa11.42□□□□□ -0.58
VIM-208ENST00000497849 CYTL1Q9NRR1 136 aa11.42□□□□□ -0.58
VIM-208ENST00000497849 SOCS3O14543 225 aa11.41□□□□□ -0.58
VIM-208ENST00000497849 EIF5AP63241 154 aaKnown RBP11.41□□□□□ -0.58
VIM-208ENST00000497849 ATP6V1FQ16864 119 aa11.41□□□□□ -0.58
VIM-208ENST00000497849 FAM78BQ5VT40 261 aa11.41□□□□□ -0.58
VIM-208ENST00000497849 TMEM144Q7Z5S9 345 aa11.41□□□□□ -0.58
VIM-208ENST00000497849 THAP8Q8NA92 274 aa11.41□□□□□ -0.58
VIM-208ENST00000497849 ATP5SQ99766 215 aa11.41□□□□□ -0.58
VIM-208ENST00000497849 WFDC1Q9HC57 220 aa11.41□□□□□ -0.58
VIM-208ENST00000497849 RD3LP0DJH9 198 aa11.4□□□□□ -0.58
VIM-208ENST00000497849 PSG1P11464 419 aa11.4□□□□□ -0.58
VIM-208ENST00000497849 ZNF266Q14584 549 aa11.4□□□□□ -0.58
VIM-208ENST00000497849 RPL7L1Q6DKI1 246 aaKnown RBP11.4□□□□□ -0.58
VIM-208ENST00000497849 Q6ZRN7 208 aaPredicted RBP11.4□□□□□ -0.58
VIM-208ENST00000497849 STOML3Q8TAV4 291 aa11.4□□□□□ -0.58
VIM-208ENST00000497849 NPVFQ9HCQ7 196 aa11.4□□□□□ -0.58
VIM-208ENST00000497849 UQCC1Q9NVA1 299 aa11.4□□□□□ -0.58
VIM-208ENST00000497849 PGPEP1Q9NXJ5 209 aa11.4□□□□□ -0.58
VIM-208ENST00000497849 A0A1W2PPQ1 181 aa11.39□□□□□ -0.59
VIM-208ENST00000497849 PLAC8L1A1L4L8 177 aa11.39□□□□□ -0.59
VIM-208ENST00000497849 ZNF705GA8MUZ8 300 aaPredicted RBP11.39□□□□□ -0.59
VIM-208ENST00000497849 J3QL48 77 aa11.39□□□□□ -0.59
VIM-208ENST00000497849 IFNA5P01569 189 aa11.39□□□□□ -0.59
VIM-208ENST00000497849 SMR3BP02814 79 aaPredicted RBP11.39□□□□□ -0.59
VIM-208ENST00000497849 ATP5G1P05496 136 aa11.39□□□□□ -0.59
VIM-208ENST00000497849 TPT1P13693 172 aaKnown RBP11.39□□□□□ -0.59
VIM-208ENST00000497849 ATP5G3P48201 142 aa11.39□□□□□ -0.59
VIM-208ENST00000497849 PSMB3P49720 205 aa11.39□□□□□ -0.59
VIM-208ENST00000497849 SPATA31B1PQ5VZV4 182 aa11.39□□□□□ -0.59
VIM-208ENST00000497849 IGF2BP2-AS1Q96M15 143 aa11.39□□□□□ -0.59
VIM-208ENST00000497849 UHRF2Q96PU4 802 aa11.39□□□□□ -0.59
VIM-208ENST00000497849 TRGV9Q99603 122 aa11.39□□□□□ -0.59
VIM-208ENST00000497849 TMEM208Q9BTX3 173 aa11.39□□□□□ -0.59
VIM-208ENST00000497849 TMEM147Q9BVK8 224 aa11.39□□□□□ -0.59
VIM-208ENST00000497849 GGACTQ9BVM4 153 aa11.39□□□□□ -0.59
VIM-208ENST00000497849 A0A0J9YX75 114 aa11.38□□□□□ -0.59
VIM-208ENST00000497849 UBE2L5PA0A1B0GUS4 154 aa11.38□□□□□ -0.59
VIM-208ENST00000497849 TOMM40O96008 361 aa11.38□□□□□ -0.59
VIM-208ENST00000497849 ID1P41134 155 aa11.38□□□□□ -0.59
VIM-208ENST00000497849 KRTAP10-1P60331 282 aa11.38□□□□□ -0.59
VIM-208ENST00000497849 IFITM2Q01629 132 aa11.38□□□□□ -0.59
VIM-208ENST00000497849 AMTNQ6UX39 209 aa11.38□□□□□ -0.59
VIM-208ENST00000497849 CYP2G1PQ6ZSU1 146 aa11.38□□□□□ -0.59
VIM-208ENST00000497849 BAP18Q8IXM2 172 aa11.38□□□□□ -0.59
VIM-208ENST00000497849 OR51G1Q8NGK1 321 aa11.38□□□□□ -0.59
VIM-208ENST00000497849 MGST2Q99735 147 aa11.38□□□□□ -0.59
VIM-208ENST00000497849 UPK3BQ9BT76 320 aa11.38□□□□□ -0.59
VIM-208ENST00000497849 ZNF586Q9NXT0 402 aa11.38□□□□□ -0.59
VIM-208ENST00000497849 CBY3A6NI87 242 aa11.37□□□□□ -0.59
VIM-208ENST00000497849 A8MTW9 85 aa11.37□□□□□ -0.59
VIM-208ENST00000497849 FNDC10F2Z333 226 aa11.37□□□□□ -0.59
VIM-208ENST00000497849 VWC2Q2TAL6 325 aa11.37□□□□□ -0.59
VIM-208ENST00000497849 EBLN2Q6P2I7 272 aa11.37□□□□□ -0.59
VIM-208ENST00000497849 TEX261Q6UWH6 196 aa11.37□□□□□ -0.59
VIM-208ENST00000497849 SCGB1C1Q8TD33 95 aa11.37□□□□□ -0.59
VIM-208ENST00000497849 C17orf77Q96MU5 243 aa11.37□□□□□ -0.59
VIM-208ENST00000497849 PBDC1Q9BVG4 233 aa11.37□□□□□ -0.59
VIM-208ENST00000497849 WDR83OSQ9Y284 106 aa11.37□□□□□ -0.59
VIM-208ENST00000497849 AGPAT2O15120 278 aa11.36□□□□□ -0.59
VIM-208ENST00000497849 CRXO43186 299 aaPredicted RBP11.36□□□□□ -0.59
VIM-208ENST00000497849 CFDP00746 253 aaPredicted RBP11.36□□□□□ -0.59
VIM-208ENST00000497849 IFNA7P01567 189 aa11.36□□□□□ -0.59
VIM-208ENST00000497849 AZU1P20160 251 aa11.36□□□□□ -0.59
VIM-208ENST00000497849 FGF7P21781 194 aa11.36□□□□□ -0.59
VIM-208ENST00000497849 TSPOP30536 169 aa11.36□□□□□ -0.59
VIM-208ENST00000497849 LINC00315P59091 139 aa11.36□□□□□ -0.59
VIM-208ENST00000497849 LYZP61626 148 aa11.36□□□□□ -0.59
VIM-208ENST00000497849 TEPPQ6URK8 271 aa11.36□□□□□ -0.59
VIM-208ENST00000497849 ZNF680Q8NEM1 530 aa11.36□□□□□ -0.59
VIM-208ENST00000497849 PHYHIPLQ96FC7 376 aa11.36□□□□□ -0.59
VIM-208ENST00000497849 ARV1Q9H2C2 271 aa11.36□□□□□ -0.59
VIM-208ENST00000497849 SLC45A2Q9UMX9 530 aa11.36□□□□□ -0.59
VIM-208ENST00000497849 ESRGQ1W209 222 aa11.35□□□□□ -0.59
VIM-208ENST00000497849 MIC13Q5XKP0 118 aa11.35□□□□□ -0.59
VIM-208ENST00000497849 EIF5AL1Q6IS14 154 aaKnown RBP11.35□□□□□ -0.59
VIM-208ENST00000497849 CDPF1Q6NVV7 123 aa11.35□□□□□ -0.59
VIM-208ENST00000497849 HSD17B11Q8NBQ5 300 aa11.35□□□□□ -0.59
VIM-208ENST00000497849 BPIFCQ8NFQ6 507 aa11.35□□□□□ -0.59
VIM-208ENST00000497849 C20orf173Q96LM9 149 aa11.35□□□□□ -0.59
VIM-208ENST00000497849 PARD6GQ9BYG4 376 aaPredicted RBP11.35□□□□□ -0.59
VIM-208ENST00000497849 DOK5Q9P104 306 aa11.35□□□□□ -0.59
VIM-208ENST00000497849 RGS13O14921 159 aa11.34□□□□□ -0.59
VIM-208ENST00000497849 LINC00869P0C866 280 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms