RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 UBE2L3P68036 154 aaKnown RBP11.83□□□□□ -0.52
CTDSP1-214ENST00000497677 CST9LP1Q5W188 147 aa11.83□□□□□ -0.52
CTDSP1-214ENST00000497677 CCDC28AQ8IWP9 274 aa11.83□□□□□ -0.52
CTDSP1-214ENST00000497677 GBGT1Q8N5D6 347 aa11.83□□□□□ -0.52
CTDSP1-214ENST00000497677 EDA2RQ9HAV5 297 aa11.83□□□□□ -0.52
CTDSP1-214ENST00000497677 RETNQ9HD89 108 aa11.83□□□□□ -0.52
CTDSP1-214ENST00000497677 NBEAL2Q6ZNJ1 2754 aa11.82□□□□□ -0.52
CTDSP1-214ENST00000497677 LOC102724200A0A096LPH7 203 aaPredicted RBP11.82□□□□□ -0.52
CTDSP1-214ENST00000497677 FAM74A7A6NL05 159 aa11.82□□□□□ -0.52
CTDSP1-214ENST00000497677 SNAPINO95295 136 aa11.82□□□□□ -0.52
CTDSP1-214ENST00000497677 USF2Q15853 346 aaPredicted RBP11.82□□□□□ -0.52
CTDSP1-214ENST00000497677 BPIFA4PQ86YQ2 179 aa11.82□□□□□ -0.52
CTDSP1-214ENST00000497677 MS4A6AQ9H2W1 248 aa11.82□□□□□ -0.52
CTDSP1-214ENST00000497677 A0A1W2PS18 150 aa11.81□□□□□ -0.52
CTDSP1-214ENST00000497677 EIF3GO75821 320 aaKnown RBP eCLIP11.81□□□□□ -0.52
CTDSP1-214ENST00000497677 TFPI2P48307 235 aa11.81□□□□□ -0.52
CTDSP1-214ENST00000497677 ZNF503Q96F45 646 aa11.81□□□□□ -0.52
CTDSP1-214ENST00000497677 GPR82Q96P67 336 aa11.81□□□□□ -0.52
CTDSP1-214ENST00000497677 TRAV2A0A0B4J234 112 aa11.8□□□□□ -0.52
CTDSP1-214ENST00000497677 TRAV5A0A0B4J249 113 aa11.8□□□□□ -0.52
CTDSP1-214ENST00000497677 ZNF98A6NK75 572 aa11.8□□□□□ -0.52
CTDSP1-214ENST00000497677 HIST1H1EP10412 219 aaKnown RBP11.8□□□□□ -0.52
CTDSP1-214ENST00000497677 RPL7P18124 248 aaKnown RBP11.8□□□□□ -0.52
CTDSP1-214ENST00000497677 ADCYAP1P18509 176 aa11.8□□□□□ -0.52
CTDSP1-214ENST00000497677 ZNF124Q15973 351 aa11.8□□□□□ -0.52
CTDSP1-214ENST00000497677 C1orf194Q5T5A4 169 aa11.8□□□□□ -0.52
CTDSP1-214ENST00000497677 MORN5Q5VZ52 161 aa11.8□□□□□ -0.52
CTDSP1-214ENST00000497677 APRG1Q8IVJ8 170 aa11.8□□□□□ -0.52
CTDSP1-214ENST00000497677 CYB561D1Q8N8Q1 229 aa11.8□□□□□ -0.52
CTDSP1-214ENST00000497677 RPUSD4Q96CM3 377 aaKnown RBP11.8□□□□□ -0.52
CTDSP1-214ENST00000497677 FXYD5Q96DB9 178 aa11.8□□□□□ -0.52
CTDSP1-214ENST00000497677 NIPSNAP3BQ9BS92 247 aa11.8□□□□□ -0.52
CTDSP1-214ENST00000497677 MAP6D1Q9H9H5 199 aa11.8□□□□□ -0.52
CTDSP1-214ENST00000497677 NBEAP1P0C6P0 100 aa11.79□□□□□ -0.52
CTDSP1-214ENST00000497677 CMC4P56277 68 aaPredicted RBP11.79□□□□□ -0.52
CTDSP1-214ENST00000497677 UBE2G2P60604 165 aa11.79□□□□□ -0.52
CTDSP1-214ENST00000497677 PAFAH1B2P68402 229 aa11.79□□□□□ -0.52
CTDSP1-214ENST00000497677 PNRC1Q12796 327 aaPredicted RBP11.79□□□□□ -0.52
CTDSP1-214ENST00000497677 C16orf54Q6UWD8 224 aa11.79□□□□□ -0.52
CTDSP1-214ENST00000497677 WFDC3Q8IUB2 231 aa11.79□□□□□ -0.52
CTDSP1-214ENST00000497677 FAM24BQ8N5W8 94 aa11.79□□□□□ -0.52
CTDSP1-214ENST00000497677 MUC7Q8TAX7 377 aa11.79□□□□□ -0.52
CTDSP1-214ENST00000497677 GLMPQ8WWB7 406 aa11.79□□□□□ -0.52
CTDSP1-214ENST00000497677 KMT2CQ8NEZ4 4911 aaKnown RBP11.78□□□□□ -0.52
CTDSP1-214ENST00000497677 DNAH7Q8WXX0 4024 aa11.78□□□□□ -0.52
CTDSP1-214ENST00000497677 C3orf84H3BNL1 204 aa11.78□□□□□ -0.52
CTDSP1-214ENST00000497677 BUB3O43684 328 aa11.78□□□□□ -0.52
CTDSP1-214ENST00000497677 OR10J4P0C629 311 aa11.78□□□□□ -0.52
CTDSP1-214ENST00000497677 MEOX2P50222 304 aa11.78□□□□□ -0.52
CTDSP1-214ENST00000497677 RPL11P62913 178 aaKnown RBP11.78□□□□□ -0.52
CTDSP1-214ENST00000497677 PDE6HQ13956 83 aa11.78□□□□□ -0.52
CTDSP1-214ENST00000497677 LYPD1Q8N2G4 141 aa11.78□□□□□ -0.52
CTDSP1-214ENST00000497677 DCANP1Q8TF63 244 aa11.78□□□□□ -0.52
CTDSP1-214ENST00000497677 C11orf52Q96A22 123 aa11.78□□□□□ -0.52
CTDSP1-214ENST00000497677 OVOL2Q9BRP0 275 aa11.78□□□□□ -0.52
CTDSP1-214ENST00000497677 YTHDF2Q9Y5A9 579 aaKnown RBP11.78□□□□□ -0.52
CTDSP1-214ENST00000497677 KIR2DL5BA0A0G2JN68 375 aa11.77□□□□□ -0.53
CTDSP1-214ENST00000497677 KIR2DL5BA0A0G2JPC4 375 aa11.77□□□□□ -0.53
CTDSP1-214ENST00000497677 K7EQG2 157 aa11.77□□□□□ -0.53
CTDSP1-214ENST00000497677 DNASE2O00115 360 aaPredicted RBP11.77□□□□□ -0.53
CTDSP1-214ENST00000497677 PYYP10082 97 aa11.77□□□□□ -0.53
CTDSP1-214ENST00000497677 KIR2DL5AQ8N109 375 aa11.77□□□□□ -0.53
CTDSP1-214ENST00000497677 KIR2DL5BQ8NHK3 375 aa11.77□□□□□ -0.53
CTDSP1-214ENST00000497677 ZNF727A8MUV8 499 aa11.76□□□□□ -0.53
CTDSP1-214ENST00000497677 B4DEV8 164 aa11.76□□□□□ -0.53
CTDSP1-214ENST00000497677 RPL35AP18077 110 aaKnown RBP11.76□□□□□ -0.53
CTDSP1-214ENST00000497677 ATP5G3P48201 142 aa11.76□□□□□ -0.53
CTDSP1-214ENST00000497677 CEBPGP53567 150 aa11.76□□□□□ -0.53
CTDSP1-214ENST00000497677 DEFB131AP59861 70 aa11.76□□□□□ -0.53
CTDSP1-214ENST00000497677 RHEBQ15382 184 aa11.76□□□□□ -0.53
CTDSP1-214ENST00000497677 HIST1H2BAQ96A08 127 aa11.76□□□□□ -0.53
CTDSP1-214ENST00000497677 TVP23CQ96ET8 276 aa11.76□□□□□ -0.53
CTDSP1-214ENST00000497677 GRAMD2BQ96HH9 432 aa11.76□□□□□ -0.53
CTDSP1-214ENST00000497677 SMIM7Q9BQ49 75 aa11.76□□□□□ -0.53
CTDSP1-214ENST00000497677 PRELID1Q9Y255 219 aa11.76□□□□□ -0.53
CTDSP1-214ENST00000497677 H3BQ15 152 aa11.75□□□□□ -0.53
CTDSP1-214ENST00000497677 UBE2CO00762 179 aa11.75□□□□□ -0.53
CTDSP1-214ENST00000497677 ZNF253O75346 499 aa11.75□□□□□ -0.53
CTDSP1-214ENST00000497677 IGLC2P0DOY2 106 aa11.75□□□□□ -0.53
CTDSP1-214ENST00000497677 APOC4P55056 127 aa11.75□□□□□ -0.53
CTDSP1-214ENST00000497677 Q6ZWC4 215 aa11.75□□□□□ -0.53
CTDSP1-214ENST00000497677 OR8I2Q8N0Y5 310 aa11.75□□□□□ -0.53
CTDSP1-214ENST00000497677 ARL6IP6Q8N6S5 226 aa11.75□□□□□ -0.53
CTDSP1-214ENST00000497677 CLRN3Q8NCR9 226 aa11.75□□□□□ -0.53
CTDSP1-214ENST00000497677 PARLQ9H300 379 aa11.75□□□□□ -0.53
CTDSP1-214ENST00000497677 OTORQ9NRC9 128 aa11.75□□□□□ -0.53
CTDSP1-214ENST00000497677 NAT8Q9UHE5 227 aa11.75□□□□□ -0.53
CTDSP1-214ENST00000497677 HELTA6NFD8 242 aa11.74□□□□□ -0.53
CTDSP1-214ENST00000497677 S100A9P06702 114 aaKnown RBP11.74□□□□□ -0.53
CTDSP1-214ENST00000497677 GALR1P47211 349 aa11.74□□□□□ -0.53
CTDSP1-214ENST00000497677 SUMO1P63165 101 aaKnown RBP11.74□□□□□ -0.53
CTDSP1-214ENST00000497677 PSG9Q00887 426 aa11.74□□□□□ -0.53
CTDSP1-214ENST00000497677 TMEM241Q24JQ0 296 aa11.74□□□□□ -0.53
CTDSP1-214ENST00000497677 CASC10Q5T4H9 136 aa11.74□□□□□ -0.53
CTDSP1-214ENST00000497677 LEMD1Q68G75 181 aa11.74□□□□□ -0.53
CTDSP1-214ENST00000497677 TRBV19A0A075B6N1 114 aa11.73□□□□□ -0.53
CTDSP1-214ENST00000497677 GGTLC3B5MD39 225 aa11.73□□□□□ -0.53
CTDSP1-214ENST00000497677 M0R036 132 aa11.73□□□□□ -0.53
CTDSP1-214ENST00000497677 MRPS12O15235 138 aaKnown RBP11.73□□□□□ -0.53
CTDSP1-214ENST00000497677 NDUFB4O95168 129 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms