RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 SMDT1Q9H4I9 107 aa14.66□□□□□ -0.06
SCAMP3-209ENST00000497470 SUMO1P63165 101 aaKnown RBP14.65□□□□□ -0.06
SCAMP3-209ENST00000497470 CCL20P78556 96 aa14.65□□□□□ -0.06
SCAMP3-209ENST00000497470 IQCF2Q8IXL9 164 aa14.65□□□□□ -0.06
SCAMP3-209ENST00000497470 CMTM2Q8TAZ6 248 aa14.65□□□□□ -0.06
SCAMP3-209ENST00000497470 RPUSD4Q96CM3 377 aaKnown RBP14.65□□□□□ -0.06
SCAMP3-209ENST00000497470 C20orf173Q96LM9 149 aa14.65□□□□□ -0.06
SCAMP3-209ENST00000497470 SAV1Q9H4B6 383 aaPredicted RBP14.65□□□□□ -0.06
SCAMP3-209ENST00000497470 SELENOKQ9Y6D0 94 aa14.65□□□□□ -0.06
SCAMP3-209ENST00000497470 TRBV7-9A0A0J9YWB2 115 aa14.64□□□□□ -0.07
SCAMP3-209ENST00000497470 A0A0J9YX75 114 aa14.64□□□□□ -0.07
SCAMP3-209ENST00000497470 GGTLC3B5MD39 225 aa14.64□□□□□ -0.07
SCAMP3-209ENST00000497470 F6UZH7 168 aa14.64□□□□□ -0.07
SCAMP3-209ENST00000497470 H3BTX0 84 aa14.64□□□□□ -0.07
SCAMP3-209ENST00000497470 BCL2P10415 239 aa14.64□□□□□ -0.07
SCAMP3-209ENST00000497470 HLA-DRB4P13762 266 aa14.64□□□□□ -0.07
SCAMP3-209ENST00000497470 EBLN2Q6P2I7 272 aa14.64□□□□□ -0.07
SCAMP3-209ENST00000497470 EXOC3-AS1Q8N2X6 119 aa14.64□□□□□ -0.07
SCAMP3-209ENST00000497470 ZNF738Q8NE65 137 aa14.64□□□□□ -0.07
SCAMP3-209ENST00000497470 LINC00052Q96N35 136 aa14.64□□□□□ -0.07
SCAMP3-209ENST00000497470 VAX2Q9UIW0 290 aa14.64□□□□□ -0.07
SCAMP3-209ENST00000497470 EPDR1Q9UM22 224 aa14.64□□□□□ -0.07
SCAMP3-209ENST00000497470 YTHDF2Q9Y5A9 579 aaKnown RBP14.64□□□□□ -0.07
SCAMP3-209ENST00000497470 HLA-DRB4X5D2U9 266 aa14.64□□□□□ -0.07
SCAMP3-209ENST00000497470 PAGE4O60829 102 aa14.63□□□□□ -0.07
SCAMP3-209ENST00000497470 C9orf47Q6ZRZ4 202 aa14.63□□□□□ -0.07
SCAMP3-209ENST00000497470 RNF182Q8N6D2 247 aa14.63□□□□□ -0.07
SCAMP3-209ENST00000497470 OR8A1Q8NGG7 326 aa14.63□□□□□ -0.07
SCAMP3-209ENST00000497470 LINC00477Q96M19 166 aa14.63□□□□□ -0.07
SCAMP3-209ENST00000497470 ODF3Q96PU9 254 aa14.63□□□□□ -0.07
SCAMP3-209ENST00000497470 MED9Q9NWA0 146 aa14.63□□□□□ -0.07
SCAMP3-209ENST00000497470 GNG13Q9P2W3 67 aa14.63□□□□□ -0.07
SCAMP3-209ENST00000497470 LENEPQ9Y5L5 61 aa14.63□□□□□ -0.07
SCAMP3-209ENST00000497470 DIRC3C9JPN6 131 aa14.62□□□□□ -0.07
SCAMP3-209ENST00000497470 K7EQM0 130 aa14.62□□□□□ -0.07
SCAMP3-209ENST00000497470 PDE6DO43924 150 aa14.62□□□□□ -0.07
SCAMP3-209ENST00000497470 SNRPCP09234 159 aaKnown RBP14.62□□□□□ -0.07
SCAMP3-209ENST00000497470 MEF2BQ02080 365 aaPredicted RBP14.62□□□□□ -0.07
SCAMP3-209ENST00000497470 FAM210AQ96ND0 272 aa14.62□□□□□ -0.07
SCAMP3-209ENST00000497470 ATG101Q9BSB4 218 aa14.62□□□□□ -0.07
SCAMP3-209ENST00000497470 H3BMM0 161 aa14.61□□□□□ -0.07
SCAMP3-209ENST00000497470 M0R3E3 92 aa14.61□□□□□ -0.07
SCAMP3-209ENST00000497470 S100A9P06702 114 aaKnown RBP14.61□□□□□ -0.07
SCAMP3-209ENST00000497470 ZNF506Q5JVG8 444 aa14.61□□□□□ -0.07
SCAMP3-209ENST00000497470 CST9LP1Q5W188 147 aa14.61□□□□□ -0.07
SCAMP3-209ENST00000497470 OR10J6PQ8NGY7 276 aa14.61□□□□□ -0.07
SCAMP3-209ENST00000497470 C11orf52Q96A22 123 aa14.61□□□□□ -0.07
SCAMP3-209ENST00000497470 PRR25Q96S07 402 aa14.61□□□□□ -0.07
SCAMP3-209ENST00000497470 KIR2DL5BA0A0G2JN68 375 aa14.6□□□□□ -0.07
SCAMP3-209ENST00000497470 KIR2DL5BA0A0G2JPC4 375 aa14.6□□□□□ -0.07
SCAMP3-209ENST00000497470 LOC102723971A0A1B0GUV8 181 aa14.6□□□□□ -0.07
SCAMP3-209ENST00000497470 RBFOX3A6NFN3 312 aa14.6□□□□□ -0.07
SCAMP3-209ENST00000497470 C11orf94C9JXX5 98 aa14.6□□□□□ -0.07
SCAMP3-209ENST00000497470 NPIPB6E9PJ23 425 aa14.6□□□□□ -0.07
SCAMP3-209ENST00000497470 TCRAP04437 139 aa14.6□□□□□ -0.07
SCAMP3-209ENST00000497470 IGFL4Q6B9Z1 124 aa14.6□□□□□ -0.07
SCAMP3-209ENST00000497470 KIR2DL5AQ8N109 375 aa14.6□□□□□ -0.07
SCAMP3-209ENST00000497470 KIR2DL5BQ8NHK3 375 aa14.6□□□□□ -0.07
SCAMP3-209ENST00000497470 KLF12Q9Y4X4 402 aa14.6□□□□□ -0.07
SCAMP3-209ENST00000497470 TRBV6-1A0A0K0K1D8 114 aa14.59□□□□□ -0.07
SCAMP3-209ENST00000497470 TMEM250H0YL14 139 aa14.59□□□□□ -0.07
SCAMP3-209ENST00000497470 HLA-DMBP28068 263 aa14.59□□□□□ -0.07
SCAMP3-209ENST00000497470 UBE2G2P60604 165 aa14.59□□□□□ -0.07
SCAMP3-209ENST00000497470 NUTF2P61970 127 aaKnown RBP14.59□□□□□ -0.07
SCAMP3-209ENST00000497470 MORN3Q6PF18 240 aaPredicted RBP14.59□□□□□ -0.07
SCAMP3-209ENST00000497470 LINC00322Q6ZN03 302 aaPredicted RBP14.59□□□□□ -0.07
SCAMP3-209ENST00000497470 TRPT1Q86TN4 253 aaKnown RBP14.59□□□□□ -0.07
SCAMP3-209ENST00000497470 CYB561D1Q8N8Q1 229 aa14.59□□□□□ -0.07
SCAMP3-209ENST00000497470 AURKAIP1Q9NWT8 199 aaPredicted RBP14.59□□□□□ -0.07
SCAMP3-209ENST00000497470 A0A1B0GV50 99 aa14.58□□□□□ -0.08
SCAMP3-209ENST00000497470 RAB19A4D1S5 217 aa14.58□□□□□ -0.08
SCAMP3-209ENST00000497470 AMBPP02760 352 aa14.58□□□□□ -0.08
SCAMP3-209ENST00000497470 STHQ8IWL8 128 aa14.58□□□□□ -0.08
SCAMP3-209ENST00000497470 TMEM75Q8N9X5 138 aa14.58□□□□□ -0.08
SCAMP3-209ENST00000497470 ZNF705FA8MVS1 300 aaPredicted RBP14.57□□□□□ -0.08
SCAMP3-209ENST00000497470 APRG1Q8IVJ8 170 aa14.57□□□□□ -0.08
SCAMP3-209ENST00000497470 DEFB125Q8N687 156 aa14.57□□□□□ -0.08
SCAMP3-209ENST00000497470 CITED4Q96RK1 184 aa14.57□□□□□ -0.08
SCAMP3-209ENST00000497470 NBEAL1Q6ZS30 2694 aa14.56□□□□□ -0.08
SCAMP3-209ENST00000497470 PEX7O00628 323 aa14.56□□□□□ -0.08
SCAMP3-209ENST00000497470 UBE2CO00762 179 aa14.56□□□□□ -0.08
SCAMP3-209ENST00000497470 IGHV4-30-4P0DP06 118 aa14.56□□□□□ -0.08
SCAMP3-209ENST00000497470 ATP5G3P48201 142 aa14.56□□□□□ -0.08
SCAMP3-209ENST00000497470 CNN1P51911 297 aaKnown RBP14.56□□□□□ -0.08
SCAMP3-209ENST00000497470 ACTL10Q5JWF8 245 aa14.56□□□□□ -0.08
SCAMP3-209ENST00000497470 C2CD4CQ8TF44 421 aa14.56□□□□□ -0.08
SCAMP3-209ENST00000497470 TUBA4BQ9H853 241 aa14.56□□□□□ -0.08
SCAMP3-209ENST00000497470 SRD5A3Q9H8P0 318 aa14.56□□□□□ -0.08
SCAMP3-209ENST00000497470 DNHD1Q96M86 4753 aa14.56□□□□□ -0.08
SCAMP3-209ENST00000497470 LOC102724200A0A096LPH7 203 aaPredicted RBP14.55□□□□□ -0.08
SCAMP3-209ENST00000497470 PRAC2D3DTV9 90 aa14.55□□□□□ -0.08
SCAMP3-209ENST00000497470 PEA15Q15121 130 aa14.55□□□□□ -0.08
SCAMP3-209ENST00000497470 HAGHQ16775 308 aa14.55□□□□□ -0.08
SCAMP3-209ENST00000497470 TMEM78Q5T7P6 136 aa14.55□□□□□ -0.08
SCAMP3-209ENST00000497470 AMTNQ6UX39 209 aa14.55□□□□□ -0.08
SCAMP3-209ENST00000497470 FMC1Q96HJ9 113 aa14.55□□□□□ -0.08
SCAMP3-209ENST00000497470 FAM19A4Q96LR4 140 aa14.55□□□□□ -0.08
SCAMP3-209ENST00000497470 ZNF492Q9P255 531 aa14.55□□□□□ -0.08
SCAMP3-209ENST00000497470 NOTCH1P46531 2555 aa14.54□□□□□ -0.08
SCAMP3-209ENST00000497470 CRISP2P16562 243 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms