RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 EIF4E3Q8N5X7 224 aaKnown RBP3.62□□□□□ -1.83
CMSS1-209ENST00000497345 RNF182Q8N6D2 247 aa3.62□□□□□ -1.83
CMSS1-209ENST00000497345 STXBP6Q8NFX7 210 aa3.62□□□□□ -1.83
CMSS1-209ENST00000497345 SMIM7Q9BQ49 75 aa3.62□□□□□ -1.83
CMSS1-209ENST00000497345 ELOVL1Q9BW60 279 aa3.62□□□□□ -1.83
CMSS1-209ENST00000497345 PARLQ9H300 379 aa3.62□□□□□ -1.83
CMSS1-209ENST00000497345 Q9H3A6 140 aa3.62□□□□□ -1.83
CMSS1-209ENST00000497345 RPS10P5Q9NQ39 176 aa3.62□□□□□ -1.83
CMSS1-209ENST00000497345 SETXQ7Z333 2677 aaKnown RBP3.62□□□□□ -1.83
CMSS1-209ENST00000497345 CELSR1Q9NYQ6 3014 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 HIVEP1P15822 2718 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 MXRA5Q9NR99 2828 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 TRBV19A0A075B6N1 114 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 IGHV7-4-1A0A0J9YVY3 117 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 TMEM89A2RUT3 159 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 HELTA6NFD8 242 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 F6UZH7 168 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 LINC01619G3V211 115 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 M0R3E3 92 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 PEX7O00628 323 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 BUB3O43684 328 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 PDE6DO43924 150 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 ZNF705DP0CH99 300 aaPredicted RBP3.61□□□□□ -1.83
CMSS1-209ENST00000497345 ZNF705BP0CI00 300 aaPredicted RBP3.61□□□□□ -1.83
CMSS1-209ENST00000497345 RPL7P18124 248 aaKnown RBP3.61□□□□□ -1.83
CMSS1-209ENST00000497345 TAGLN2P37802 199 aaKnown RBP3.61□□□□□ -1.83
CMSS1-209ENST00000497345 GALR1P47211 349 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 DEFB1P60022 68 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 KRTAP10-3P60369 221 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 BTN1A1Q13410 526 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 TMEM241Q24JQ0 296 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 KLK9Q2XQG4 91 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 AWAT1Q58HT5 328 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 FAM90A2PQ658T7 463 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 TMEM88Q6PEY1 159 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 GOLT1AQ6ZVE7 132 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 TCF24Q7RTU0 167 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 S100A7AQ86SG5 101 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 PRNTQ86SH4 94 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 CMTM2Q8TAZ6 248 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 TMEM190Q8WZ59 177 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 DLX4Q92988 240 aaPredicted RBP3.61□□□□□ -1.83
CMSS1-209ENST00000497345 RPL36ALQ969Q0 106 aaKnown RBP3.61□□□□□ -1.83
CMSS1-209ENST00000497345 GRAMD2BQ96HH9 432 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 UBE2E2Q96LR5 201 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 RHPN1-AS1Q9BWJ2 59 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 SEC11CQ9BY50 192 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 C16orf95Q9H693 158 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 OTORQ9NRC9 128 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 TMEM14CQ9P0S9 112 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 SMPXQ9UHP9 88 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 KLK9Q9UKQ9 250 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 EPDR1Q9UM22 224 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 UFC1Q9Y3C8 167 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 F8P00451 2351 aa3.61□□□□□ -1.83
CMSS1-209ENST00000497345 FN1P02751 2386 aaKnown RBP3.61□□□□□ -1.83
CMSS1-209ENST00000497345 OTOGQ6ZRI0 2925 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 IGKV2-40A0A087WW87 121 aaPredicted RBP3.6□□□□□ -1.83
CMSS1-209ENST00000497345 TRAV8-1A0A0A6YYK1 113 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 A0A1W2PRE2 83 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 C7orf77A4D0Y5 90 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 PRAC2D3DTV9 90 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 J3KRW8 73 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 M0QZ24 198 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 CCL24O00175 119 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 CHEK1O14757 476 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 MRPS12O15235 138 aaKnown RBP3.6□□□□□ -1.83
CMSS1-209ENST00000497345 NDUFA7O95182 113 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 SNAPINO95295 136 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 BRI3O95415 125 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 IGKV2D-40P01614 121 aaPredicted RBP3.6□□□□□ -1.83
CMSS1-209ENST00000497345 IGLC2P0DOY2 106 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 S100A7P31151 101 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 RPL35P42766 123 aaKnown RBP3.6□□□□□ -1.83
CMSS1-209ENST00000497345 CSN1S1P47710 185 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 CDX1P47902 265 aaPredicted RBP3.6□□□□□ -1.83
CMSS1-209ENST00000497345 GNG4P50150 75 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 CNN1P51911 297 aaKnown RBP3.6□□□□□ -1.83
CMSS1-209ENST00000497345 UBE2G1P62253 170 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 ERCC8Q13216 396 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 OR5I1Q13606 314 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 FAM74A3Q4VXF1 159 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 CENPWQ5EE01 88 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 FAM209BQ5JX69 171 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 PRR27Q6MZM9 219 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 C16orf54Q6UWD8 224 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 SIGLEC15Q6ZMC9 328 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 GPHB5Q86YW7 130 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 CBLN2Q8IUK8 224 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 CCDC28AQ8IWP9 274 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 SVBPQ8N300 66 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 ZNF738Q8NE65 137 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 DYNLRB2Q8TF09 96 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 C4orf3Q8WVX3 66 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 TVP23CQ96ET8 276 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 NIPSNAP3BQ9BS92 247 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 C1orf43Q9BWL3 253 aa3.6□□□□□ -1.83
CMSS1-209ENST00000497345 NKX6-2Q9C056 277 aaPredicted RBP3.6□□□□□ -1.83
CMSS1-209ENST00000497345 AAMDCQ9H7C9 122 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms