RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 ZNF674Q2M3X9 581 aa6.54□□□□□ -1.36
U2AF1-212ENST00000496462 SSX7Q7RTT5 188 aa6.54□□□□□ -1.36
U2AF1-212ENST00000496462 LINC01587Q99440 93 aa6.54□□□□□ -1.36
U2AF1-212ENST00000496462 DMRT1Q9Y5R6 373 aa6.54□□□□□ -1.36
U2AF1-212ENST00000496462 IGKV1D-37A0A075B6S9 117 aa6.54□□□□□ -1.36
U2AF1-212ENST00000496462 A0A087X0K7 114 aa6.54□□□□□ -1.36
U2AF1-212ENST00000496462 TEX48A0A1B0GUV7 120 aa6.54□□□□□ -1.36
U2AF1-212ENST00000496462 PAGE4O60829 102 aa6.54□□□□□ -1.36
U2AF1-212ENST00000496462 MGST1P10620 155 aaKnown RBP6.54□□□□□ -1.36
U2AF1-212ENST00000496462 SPATA25Q9BR10 227 aa6.54□□□□□ -1.36
U2AF1-212ENST00000496462 CSTL1Q9H114 145 aa6.54□□□□□ -1.36
U2AF1-212ENST00000496462 SH3BGRL3Q9H299 93 aa6.54□□□□□ -1.36
U2AF1-212ENST00000496462 TRBV19A0A075B6N1 114 aa6.53□□□□□ -1.36
U2AF1-212ENST00000496462 H3BTX0 84 aa6.53□□□□□ -1.36
U2AF1-212ENST00000496462 OR5I1Q13606 314 aa6.53□□□□□ -1.36
U2AF1-212ENST00000496462 HAGHQ16775 308 aa6.53□□□□□ -1.36
U2AF1-212ENST00000496462 FAM159AQ6UWV7 190 aa6.53□□□□□ -1.36
U2AF1-212ENST00000496462 OR11H4Q8NGC9 324 aa6.53□□□□□ -1.36
U2AF1-212ENST00000496462 KCNS1Q96KK3 526 aa6.53□□□□□ -1.36
U2AF1-212ENST00000496462 TRAV5A0A0B4J249 113 aa6.53□□□□□ -1.36
U2AF1-212ENST00000496462 SNURFLB1AK76 121 aa6.53□□□□□ -1.36
U2AF1-212ENST00000496462 CA1P00915 261 aaPredicted RBP6.53□□□□□ -1.36
U2AF1-212ENST00000496462 PYYP10082 97 aa6.53□□□□□ -1.36
U2AF1-212ENST00000496462 GOLT1AQ6ZVE7 132 aa6.53□□□□□ -1.36
U2AF1-212ENST00000496462 MBD3L1Q8WWY6 194 aa6.53□□□□□ -1.36
U2AF1-212ENST00000496462 RCHY1Q96PM5 261 aa6.53□□□□□ -1.36
U2AF1-212ENST00000496462 SMDT1Q9H4I9 107 aa6.53□□□□□ -1.36
U2AF1-212ENST00000496462 PLXNB1O43157 2135 aa6.53□□□□□ -1.36
U2AF1-212ENST00000496462 K7EQG2 157 aa6.53□□□□□ -1.36
U2AF1-212ENST00000496462 FHITP49789 147 aa6.53□□□□□ -1.36
U2AF1-212ENST00000496462 FAM90A2PQ658T7 463 aa6.53□□□□□ -1.36
U2AF1-212ENST00000496462 OR8A1Q8NGG7 326 aa6.53□□□□□ -1.36
U2AF1-212ENST00000496462 KIR2DL5BA0A0G2JN68 375 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 KIR2DL5BA0A0G2JPC4 375 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 GNG4P50150 75 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 ZNF138P52744 262 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 KIR2DL5AQ8N109 375 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 TMEM256Q8N2U0 113 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 KIR2DL5BQ8NHK3 375 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 ATG101Q9BSB4 218 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 NHLRC4P0CG21 123 aaPredicted RBP6.52□□□□□ -1.37
U2AF1-212ENST00000496462 TOR2AQ5JU69 321 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 SOHLH1Q5JUK2 328 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 TMEM37Q8WXS4 190 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 FMC1Q96HJ9 113 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 ASCL2Q99929 193 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 SNRPCP09234 159 aaKnown RBP6.52□□□□□ -1.37
U2AF1-212ENST00000496462 KRTAP10-3P60369 221 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 GCSAMLQ5JQS6 135 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 PRNTQ86SH4 94 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 BAGE2Q86Y30 109 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 ZNF680Q8NEM1 530 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 NAGKQ9UJ70 344 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 U3KQE9 123 aa6.52□□□□□ -1.37
U2AF1-212ENST00000496462 TRGV11A0A075B6L2 103 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 IGKV1OR2-108A0A075B7D4 117 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 TRAV21A0A0B4J279 112 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 BCL2P10415 239 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 HTN1P15515 57 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 RPS20P60866 119 aaKnown RBP6.51□□□□□ -1.37
U2AF1-212ENST00000496462 MAP6D1Q9H9H5 199 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 ZNF331Q9NQX6 463 aaPredicted RBP6.51□□□□□ -1.37
U2AF1-212ENST00000496462 EPDR1Q9UM22 224 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 ZFP30Q9Y2G7 519 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 SELENOKQ9Y6D0 94 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 LOC105371267A0A1B0GV96 52 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 TMEM189A5PLL7 270 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 RBFOX3A6NFN3 312 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 ADARB2-AS1A8MUL3 147 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 FAM74A3Q4VXF1 159 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 TEX261Q6UWH6 196 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 SYT8Q8NBV8 401 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 ZNF414Q96IQ9 312 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 LENEPQ9Y5L5 61 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 ZNF727A8MUV8 499 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 J3KRW8 73 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 PEX7O00628 323 aa6.51□□□□□ -1.37
U2AF1-212ENST00000496462 RPP25LQ8N5L8 163 aaKnown RBP6.51□□□□□ -1.37
U2AF1-212ENST00000496462 TRAV1-1A0A0B4J248 108 aa6.5□□□□□ -1.37
U2AF1-212ENST00000496462 DEFA6Q01524 100 aa6.5□□□□□ -1.37
U2AF1-212ENST00000496462 MEF2BQ02080 365 aaPredicted RBP6.5□□□□□ -1.37
U2AF1-212ENST00000496462 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.5□□□□□ -1.37
U2AF1-212ENST00000496462 SMIM7Q9BQ49 75 aa6.5□□□□□ -1.37
U2AF1-212ENST00000496462 CYTL1Q9NRR1 136 aa6.5□□□□□ -1.37
U2AF1-212ENST00000496462 BOLA1Q9Y3E2 137 aa6.5□□□□□ -1.37
U2AF1-212ENST00000496462 TAS2R60P59551 318 aa6.5□□□□□ -1.37
U2AF1-212ENST00000496462 C20orf144Q9BQM9 153 aa6.5□□□□□ -1.37
U2AF1-212ENST00000496462 RBAKDNA6NC62 111 aa6.5□□□□□ -1.37
U2AF1-212ENST00000496462 KNCNA6PVL3 124 aa6.5□□□□□ -1.37
U2AF1-212ENST00000496462 F8W735 103 aaPredicted RBP6.5□□□□□ -1.37
U2AF1-212ENST00000496462 ORM1P02763 201 aa6.5□□□□□ -1.37
U2AF1-212ENST00000496462 SMIM17P0DL12 118 aa6.5□□□□□ -1.37
U2AF1-212ENST00000496462 CDKN1BP46527 198 aa6.5□□□□□ -1.37
U2AF1-212ENST00000496462 PATE2Q6UY27 113 aa6.5□□□□□ -1.37
U2AF1-212ENST00000496462 SDF2L1Q9HCN8 221 aa6.5□□□□□ -1.37
U2AF1-212ENST00000496462 G3V4G9 280 aa6.5□□□□□ -1.37
U2AF1-212ENST00000496462 S100PP25815 95 aa6.5□□□□□ -1.37
U2AF1-212ENST00000496462 DEFB125Q8N687 156 aa6.5□□□□□ -1.37
U2AF1-212ENST00000496462 SLC25A2Q9BXI2 301 aa6.5□□□□□ -1.37
U2AF1-212ENST00000496462 PKD1L1Q8TDX9 2849 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms