RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 ZNF705FA8MVS1 300 aaPredicted RBP10.87□□□□□ -0.67
HDAC9-226ENST00000496026 PRB4P10163 310 aaPredicted RBP10.87□□□□□ -0.67
HDAC9-226ENST00000496026 ICAM4Q14773 271 aa10.87□□□□□ -0.67
HDAC9-226ENST00000496026 MAP1LC3BQ9GZQ8 125 aa10.87□□□□□ -0.67
HDAC9-226ENST00000496026 TMEM167BQ9NRX6 74 aa10.87□□□□□ -0.67
HDAC9-226ENST00000496026 KIR2DL5BA0A0G2JN68 375 aa10.86□□□□□ -0.67
HDAC9-226ENST00000496026 KIR2DL5BA0A0G2JPC4 375 aa10.86□□□□□ -0.67
HDAC9-226ENST00000496026 BOLA2-SMG1P6H3BVE0 249 aa10.86□□□□□ -0.67
HDAC9-226ENST00000496026 DUSP14O95147 198 aaKnown RBP10.86□□□□□ -0.67
HDAC9-226ENST00000496026 ZNF705DP0CH99 300 aaPredicted RBP10.86□□□□□ -0.67
HDAC9-226ENST00000496026 ZNF705BP0CI00 300 aaPredicted RBP10.86□□□□□ -0.67
HDAC9-226ENST00000496026 RAB5CP51148 216 aa10.86□□□□□ -0.67
HDAC9-226ENST00000496026 FGF8P55075 233 aaPredicted RBP10.86□□□□□ -0.67
HDAC9-226ENST00000496026 HIST1H1AQ02539 215 aaPredicted RBP10.86□□□□□ -0.67
HDAC9-226ENST00000496026 KIR2DL5AQ8N109 375 aa10.86□□□□□ -0.67
HDAC9-226ENST00000496026 LYPD1Q8N2G4 141 aa10.86□□□□□ -0.67
HDAC9-226ENST00000496026 KIR2DL5BQ8NHK3 375 aa10.86□□□□□ -0.67
HDAC9-226ENST00000496026 MRPL53Q96EL3 112 aaKnown RBP10.86□□□□□ -0.67
HDAC9-226ENST00000496026 CSTL1Q9H114 145 aa10.86□□□□□ -0.67
HDAC9-226ENST00000496026 Q9H3A6 140 aa10.86□□□□□ -0.67
HDAC9-226ENST00000496026 M0R3E3 92 aa10.85□□□□□ -0.67
HDAC9-226ENST00000496026 UBE2CO00762 179 aa10.85□□□□□ -0.67
HDAC9-226ENST00000496026 NUTF2P61970 127 aaKnown RBP10.85□□□□□ -0.67
HDAC9-226ENST00000496026 FAM74A1Q5RGS3 127 aa10.85□□□□□ -0.67
HDAC9-226ENST00000496026 MORN3Q6PF18 240 aaPredicted RBP10.85□□□□□ -0.67
HDAC9-226ENST00000496026 OR8A1Q8NGG7 326 aa10.85□□□□□ -0.67
HDAC9-226ENST00000496026 OR10J6PQ8NGY7 276 aa10.85□□□□□ -0.67
HDAC9-226ENST00000496026 SFT2D1Q8WV19 159 aa10.85□□□□□ -0.67
HDAC9-226ENST00000496026 PGPA6NDG6 321 aa10.84□□□□□ -0.67
HDAC9-226ENST00000496026 CA1P00915 261 aaPredicted RBP10.84□□□□□ -0.67
HDAC9-226ENST00000496026 H2AFB1P0C5Y9 115 aa10.84□□□□□ -0.67
HDAC9-226ENST00000496026 NHLRC4P0CG21 123 aaPredicted RBP10.84□□□□□ -0.67
HDAC9-226ENST00000496026 CSN1S1P47710 185 aa10.84□□□□□ -0.67
HDAC9-226ENST00000496026 SULT1A2P50226 295 aa10.84□□□□□ -0.67
HDAC9-226ENST00000496026 CNN1P51911 297 aaKnown RBP10.84□□□□□ -0.67
HDAC9-226ENST00000496026 ALKAL2Q6UX46 152 aa10.84□□□□□ -0.67
HDAC9-226ENST00000496026 CMTM2Q8TAZ6 248 aa10.84□□□□□ -0.67
HDAC9-226ENST00000496026 ZMAT4Q9H898 229 aa10.84□□□□□ -0.67
HDAC9-226ENST00000496026 OTORQ9NRC9 128 aa10.84□□□□□ -0.67
HDAC9-226ENST00000496026 PPP1R14DQ9NXH3 145 aa10.84□□□□□ -0.67
HDAC9-226ENST00000496026 DNAH3Q8TD57 4116 aa10.83□□□□□ -0.68
HDAC9-226ENST00000496026 A0A1B0GV50 99 aa10.83□□□□□ -0.68
HDAC9-226ENST00000496026 PRAC2D3DTV9 90 aa10.83□□□□□ -0.68
HDAC9-226ENST00000496026 SUN5Q8TC36 379 aa10.83□□□□□ -0.68
HDAC9-226ENST00000496026 MBD3L1Q8WWY6 194 aa10.83□□□□□ -0.68
HDAC9-226ENST00000496026 CLUHP3Q96NS8 147 aa10.83□□□□□ -0.68
HDAC9-226ENST00000496026 SPATA25Q9BR10 227 aa10.83□□□□□ -0.68
HDAC9-226ENST00000496026 TMPRSS5Q9H3S3 457 aa10.83□□□□□ -0.68
HDAC9-226ENST00000496026 FXYD7P58549 80 aa10.82□□□□□ -0.68
HDAC9-226ENST00000496026 Q6ZWC4 215 aa10.82□□□□□ -0.68
HDAC9-226ENST00000496026 RXFP4Q8TDU9 374 aa10.82□□□□□ -0.68
HDAC9-226ENST00000496026 TM2D3Q9BRN9 247 aa10.82□□□□□ -0.68
HDAC9-226ENST00000496026 RPH3ALQ9UNE2 315 aa10.82□□□□□ -0.68
HDAC9-226ENST00000496026 IGKV2-40A0A087WW87 121 aaPredicted RBP10.81□□□□□ -0.68
HDAC9-226ENST00000496026 ZNF705EA8MWA4 302 aaPredicted RBP10.81□□□□□ -0.68
HDAC9-226ENST00000496026 TEX46H3BTG2 121 aa10.81□□□□□ -0.68
HDAC9-226ENST00000496026 IGKV2D-40P01614 121 aaPredicted RBP10.81□□□□□ -0.68
HDAC9-226ENST00000496026 SLC25A5P05141 298 aaKnown RBP10.81□□□□□ -0.68
HDAC9-226ENST00000496026 UBE2G2P60604 165 aa10.81□□□□□ -0.68
HDAC9-226ENST00000496026 DEFB135Q30KP9 77 aa10.81□□□□□ -0.68
HDAC9-226ENST00000496026 C1QTNF4Q9BXJ3 329 aa10.81□□□□□ -0.68
HDAC9-226ENST00000496026 SLC35B3Q9H1N7 401 aa10.81□□□□□ -0.68
HDAC9-226ENST00000496026 RETNQ9HD89 108 aa10.81□□□□□ -0.68
HDAC9-226ENST00000496026 A0A1W2PRE2 83 aa10.8□□□□□ -0.68
HDAC9-226ENST00000496026 A8MTW9 85 aa10.8□□□□□ -0.68
HDAC9-226ENST00000496026 NPIPB6E9PJ23 425 aa10.8□□□□□ -0.68
HDAC9-226ENST00000496026 SUMO1P63165 101 aaKnown RBP10.8□□□□□ -0.68
HDAC9-226ENST00000496026 RCHY1Q96PM5 261 aa10.8□□□□□ -0.68
HDAC9-226ENST00000496026 XCL2Q9UBD3 114 aa10.8□□□□□ -0.68
HDAC9-226ENST00000496026 SPRY2O43597 315 aa10.79□□□□□ -0.68
HDAC9-226ENST00000496026 HBE1P02100 147 aa10.79□□□□□ -0.68
HDAC9-226ENST00000496026 ERCC8Q13216 396 aa10.79□□□□□ -0.68
HDAC9-226ENST00000496026 SPINK13Q1W4C9 94 aa10.79□□□□□ -0.68
HDAC9-226ENST00000496026 TMEM78Q5T7P6 136 aa10.79□□□□□ -0.68
HDAC9-226ENST00000496026 AMTNQ6UX39 209 aa10.79□□□□□ -0.68
HDAC9-226ENST00000496026 C5orf17Q8NAS9 161 aa10.79□□□□□ -0.68
HDAC9-226ENST00000496026 YTHDF2Q9Y5A9 579 aaKnown RBP10.79□□□□□ -0.68
HDAC9-226ENST00000496026 FAM74A7A6NL05 159 aa10.78□□□□□ -0.68
HDAC9-226ENST00000496026 GGTLC3B5MD39 225 aa10.78□□□□□ -0.68
HDAC9-226ENST00000496026 DIRC3C9JPN6 131 aa10.78□□□□□ -0.68
HDAC9-226ENST00000496026 M0R2Z0 102 aa10.78□□□□□ -0.68
HDAC9-226ENST00000496026 IFNA7P01567 189 aa10.78□□□□□ -0.68
HDAC9-226ENST00000496026 AMBPP02760 352 aa10.78□□□□□ -0.68
HDAC9-226ENST00000496026 GIG44P09565 113 aaPredicted RBP10.78□□□□□ -0.68
HDAC9-226ENST00000496026 PPT1P50897 306 aa10.78□□□□□ -0.68
HDAC9-226ENST00000496026 GNG5P63218 68 aa10.78□□□□□ -0.68
HDAC9-226ENST00000496026 CST9LP1Q5W188 147 aa10.78□□□□□ -0.68
HDAC9-226ENST00000496026 ARL6IP6Q8N6S5 226 aa10.78□□□□□ -0.68
HDAC9-226ENST00000496026 RNF183Q96D59 192 aa10.78□□□□□ -0.68
HDAC9-226ENST00000496026 LINC00477Q96M19 166 aa10.78□□□□□ -0.68
HDAC9-226ENST00000496026 NKX6-2Q9C056 277 aaPredicted RBP10.78□□□□□ -0.68
HDAC9-226ENST00000496026 AGPAT4-IT1Q9H0P7 198 aa10.78□□□□□ -0.68
HDAC9-226ENST00000496026 TP53TG1Q9Y2A0 90 aa10.78□□□□□ -0.68
HDAC9-226ENST00000496026 TRAV1-1A0A0B4J248 108 aa10.77□□□□□ -0.69
HDAC9-226ENST00000496026 RBAKDNA6NC62 111 aa10.77□□□□□ -0.69
HDAC9-226ENST00000496026 PAGE4O60829 102 aa10.77□□□□□ -0.69
HDAC9-226ENST00000496026 TSPOP30536 169 aa10.77□□□□□ -0.69
HDAC9-226ENST00000496026 LEPP41159 167 aa10.77□□□□□ -0.69
HDAC9-226ENST00000496026 BLOC1S1P78537 153 aa10.77□□□□□ -0.69
HDAC9-226ENST00000496026 C9orf47Q6ZRZ4 202 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms